Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349432,991,2360CG32.9% 277.7 / 37.9 155intergenic (+37/‑170)gbsR/bslAtranscriptional regulator GbsR/biofilm‑surface layer protein BslA
Reads supporting (aligned to +/- strand):  ref base C (14/82);  new base G (47/0);  total (73/82)
Fisher's exact test for biased strand distribution p-value = 1.50e-25
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 157 total aligned reads displayed.

CTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGGCAGGCCTGAA  >  NZ_CP034943/2991101‑2991373
                                                                                                                                        |                                                                                                                                           
cTGTAAACCTCTAAAGCTTAATATTATGGGCTGAAACGGCTTGCTTAATCGGTG‑CCCAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAACGTAAACCAAAACCGCCTGGGAAACCGGGCGTTTTTTTGTTCtttt                                                                                                                                         <  1:1647471/140‑1 (MQ=255)
cTGCAAAGCTCTAAAGCTTACTATGATTGCCTCAAACGGCTTGCTCACACGGCG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTCAAACAAAGAAAAAAAAACACGCCTGGGAAACCGGGCGATTTTTTGTTCtttt                                                                                                                                         <  1:536240/140‑1 (MQ=255)
        ctctAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTGttttttttttta                                                                                                                                 >  1:2002022/1‑134 (MQ=255)
        ctctAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTCTTTTTTATGT‑aa                                                                                                                                >  2:689399/1‑140 (MQ=255)
         tctAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AAt                                                                                                                               <  2:1326930/140‑1 (MQ=255)
         tctAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AAt                                                                                                                               <  2:1073364/140‑1 (MQ=255)
           tAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTTTTGTTTTTTGTGt‑tatta                                                                                                                             >  1:776930/1‑140 (MQ=255)
           tAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTTTTGTTTTTTTTTT‑AATta                                                                                                                             >  1:853036/1‑140 (MQ=255)
           tAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTATTTTTTATGt‑tatta                                                                                                                             >  1:2239407/1‑140 (MQ=255)
                  tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTTAAACAAATTAAAACAAAATAGCCTGGCAAACAGGGCGTTTTTTTGTTATTTTTTATTT‑AATTACTAaaaa                                                                                                                      >  2:2452614/1‑140 (MQ=255)
                  tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTTTTGTTTTTTATGT‑AATTAATAaaaa                                                                                                                      >  2:361701/1‑140 (MQ=255)
                  tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTGTTTTGTTGTGTTTTATGT‑ACTTACTACaaa                                                                                                                      >  2:2807232/1‑140 (MQ=255)
                  tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTTTTGTTTTTTTTTT‑TATTAAAACaaa                                                                                                                      >  1:1006945/1‑140 (MQ=255)
                  tACTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTTTTTTTTATTT‑AATtaaaaaaaa                                                                                                                      >  1:439524/1‑133 (MQ=255)
                   aCTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTTTTGTTTTTTATTT‑AATTAATAAAAAt                                                                                                                     >  2:123290/1‑140 (MQ=255)
                   aCTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTGTTTTTTATTT‑ACTTAGTACAAAt                                                                                                                     >  2:2682348/1‑140 (MQ=255)
                   aCTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTGTTTTTTATGT‑AATTACTACaaaa                                                                                                                     >  1:2529535/1‑139 (MQ=255)
                   aCTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTTTTGTTTTTTTTGT‑TATTAATAaaaaa                                                                                                                     >  1:3395718/1‑139 (MQ=255)
                   aCTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTCTTTTTTATGT‑AATTACTAAAAAt                                                                                                                     >  2:2893778/1‑140 (MQ=255)
                   aCTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGGTTTTTTTGTTTTTTTTTT‑AATTAATAaaaaa                                                                                                                     >  1:1752260/1‑139 (MQ=255)
                        taTTGGCTGAAACGGCTTGCTG‑ATGGGTGCCAGAGCGGTTAAATTTTTAAATTTATACCGATTGAACAAAAGTAAAAAAAACACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGaa                                                                                                               <  1:2753198/139‑1 (MQ=255)
                         aTTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTGTTTTTTTTTT‑AATTATGAAAAAT‑TTGaaa                                                                                                              >  2:2965847/1‑140 (MQ=255)
                         aTTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTGTTGTTTTTTTTTTTTT‑AATTAATACaaaaatttaa                                                                                                               >  1:1200567/1‑133 (MQ=255)
                          ttGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTGTTTTTTATGT‑AAATAATAAAAAA‑TTTaaaa                                                                                                             >  2:446841/1‑140 (MQ=255)
                             gCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTGTTTTTTATTT‑AATTAATAACAAT‑TTGAAAAATa                                                                                                          >  2:2983850/1‑140 (MQ=255)
                             gCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTGTTTTGT‑AATTACTACAAAA‑TTTAAAAATa                                                                                                          >  2:3055693/1‑140 (MQ=255)
                             gCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTGTTTTGTTCTTTTTTTTGT‑TATTAGTAACAAT‑TTTaaaaaga                                                                                                          >  2:2804957/1‑138 (MQ=255)
                             gCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTGTTTTTTATGT‑AATTACAACAAAA‑ATTaaaaaaa                                                                                                          >  2:497499/1‑138 (MQ=255)
                             gCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGGTCTTTTTTTTGT‑AATTTAGACAAAA‑TTTTAAAATa                                                                                                          >  2:3294811/1‑140 (MQ=255)
                             gCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAAAAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTGTTTTTTATTT‑AATTAATAAAAAT‑ATTaaaaaaa                                                                                                          >  2:861314/1‑138 (MQ=255)
                             gCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGCGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTGTTTTTTATGT‑AATTAATACAAAA‑TTGaaaaaaa                                                                                                          >  2:571904/1‑138 (MQ=255)
                               tGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTGTTTTTTATGT‑AATTACTACAAAT‑TTTAAAAATACg                                                                                                        >  2:2641599/1‑140 (MQ=255)
                                   aCGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTGTTTTTTATGT‑AATTAATAAAAAT‑TTTAAAAATAAGGGaa                                                                                                    >  2:1758167/1‑140 (MQ=255)
                                       cTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTGTTTTTTATTT‑AATTACTAAAAAT‑TTTAAAAATACGGGaaaaaa                                                                                                >  2:3166129/1‑139 (MQ=255)
                                         tGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACAt                                                                                              <  2:1013521/140‑1 (MQ=255)
                                          gcttattCGGTG‑CCGAGCGGGTAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAAAAAACACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATc                                                                                             <  1:469555/134‑1 (MQ=255)
                                               atcttgg‑CAGATCTGGTAAATTTTTAAATTTATACCTATTGAAACAAATTAAAACAAAAACGCCTGGGAAACCGGGCTTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCAtt                                                                                        <  2:1406234/134‑1 (MQ=255)
                                                tCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTGGTTTTTATTT‑AAATAATACAAAT‑TTGAAAAATTCGGGAAAAAAATCCCAttt                                                                                       >  2:458499/1‑140 (MQ=255)
                                                   gTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTTTTCTTTTTTATGT‑AAATAAAAAAAAA‑TTTAAAAAAAAGGGAAAAAAATACCATTTaaa                                                                                    >  2:665243/1‑138 (MQ=255)
                                                   gTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTGTTTTTTATTT‑AATTACTACAAAT‑TTTTAAAATAAGGGGAAAACATAACATTTaat                                                                                    >  2:1539175/1‑138 (MQ=255)
                                                   gTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTGTTTTTTATGT‑TATTAATACAAAT‑TTTTAAAATTCGGGAAAAAACTCCCAttttat                                                                                    >  2:3260119/1‑137 (MQ=255)
                                                    tG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTTTTGTTTTTTATTT‑AATTACTAAAAAA‑TTTAAAAATAAGGGAAAAAAATACCaactgtct                                                                                   >  2:770031/1‑133 (MQ=255)
                                                    tG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTGTTTTCTTTTTTGTGTGATTTAAAAAAAAT‑TTTAAAAATAC‑GGCAAAACATCCCagattctt                                                                                   >  1:2619213/1‑133 (MQ=255)
                                                        agagCGGGGAAATTTTTAAATTCATACCGATTGAAACAAAGTAAAACAAACACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCa                                                                                <  1:1339769/140‑1 (MQ=255)
                                                               ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTGTTTTTTATGT‑AATTACTAAAAAA‑TTTAAAAAAACGGGAAAAACATACCATTTACTTACAAAATAtt                                                                         >  2:1619891/1‑140 (MQ=255)
                                                               ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTCTTTTTTATGT‑AATTAGTACAAAT‑TTGATAAATACGGGAAAAACTTCACAGTTTGTTCCAAACTAtt                                                                         >  2:3314807/1‑140 (MQ=255)
                                                               ggAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGGTTTTGTTGTTTTTTAAGT‑AATTAATACAAAA‑TTTAAAAAAAATGGAAAAACATACCATTTAATTCCAAAATAtt                                                                         >  2:2248718/1‑140 (MQ=255)
                                                                     ttttAAATTTATACCGATTGAAACAATGTAAAACAAACCCGGCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTTCAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATgg                                                                   <  2:2685522/140‑1 (MQ=255)
                                                                     ttttAAATTTATACCGATTGAAAAAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATgg                                                                   <  1:2435365/140‑1 (MQ=255)
                                                                               ataCCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATg                                                         <  1:2113993/140‑1 (MQ=255)
                                                                               ataCCGATACAAACAAAGCAAAACAAACACGCCTGGGAACCCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAA‑TTGAAAAATACGGGAACAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATg                                                         <  1:2676673/140‑1 (MQ=255)
                                                                                    gATTTAAACAACGTAAAACAAACACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGt                                                    <  1:3101051/140‑1 (MQ=255)
                                                                                    gATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGt                                                    <  1:293342/140‑1 (MQ=255)
                                                                                    gATTGAAACAAAGAAAAACAAAACCGCCTGGGAAACCGGGCGGTTTTTTGTTCTTTTTTATGT‑TATTACTACAAAA‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGt                                                    <  1:3331434/140‑1 (MQ=255)
                                                                                     aTTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTTTTTTTTTTTTTGT‑AATTAAAAAAAAA‑TTTTAAAATAAGGGAAAAAAAAACCCATTAATTGCAAAAAATTTTATGGTAATTTTATGTAgtga                                                   >  2:933301/1‑137 (MQ=255)
                                                                                     aTTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTTTTGTTTTTTTTTT‑AAATACAAAAAAA‑TTGAAAAATACGGGAAAAAAAAACCATTTACTTGAACAATATTTTTTTGTAATTTTTTGTAGGTa                                                   >  2:1797781/1‑140 (MQ=255)
                                                                                     aTTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTGTTTTTTATGT‑AATTAATAAAAAT‑TTTAAAAATAAGGGAAAAACATACCATTTACTTCCAAAAGTTTTGTTTGTAATTTTATGTAGGtt                                                   >  2:2730686/1‑139 (MQ=255)
                                                                                     aTTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTGTTTTTTATGT‑TATTACTACAAAA‑TTTAAAAATAAGGGAAAAAAATCCGATTTAATTACAAAATAATTTATTGTAATTTTTTTTGGGTa                                                   >  2:1802371/1‑140 (MQ=255)
                                                                                     aTTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGGTGTTTTTTTTGT‑TATTAATAAAAAA‑TTTTAAAATAAGGGGAAAAAAACAAAGTTAATTTGAAAAAATTTTTTGGTAATTTTATTTTGGtt                                                   >  1:122849/1‑139 (MQ=255)
                                                                                     aTTGAAACAAAGAAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTa                                                   <  1:508713/140‑1 (MQ=255)
                                                                                         aaacaaacAAAAACAACAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAAt                                               <  1:1758167/140‑1 (MQ=255)
                                                                                         aaaCAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAAt                                               <  2:122849/140‑1 (MQ=255)
                                                                                               aGTAAAACAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTGTTTTTTATTT‑AAATAAAAAAAAA‑TTTAAAAATAACGGAAAAAAAAACCATTTAATTACAAAAAATTTGATGGTAAATTTATGTATGTAAAATTTTTAt                                         >  2:1308075/1‑140 (MQ=255)
                                                                                                   acaCAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                                     <  2:1065048/138‑1 (MQ=255)
                                                                                                   aaacaaacCCGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑GTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                                     <  2:221491/140‑1 (MQ=255)
                                                                                                   aaacaaacACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                                     <  1:433422/140‑1 (MQ=255)
                                                                                                   aaacaaacACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                                     <  1:3166129/140‑1 (MQ=255)
                                                                                                   aaacaaacACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                                     <  1:1305752/140‑1 (MQ=255)
                                                                                                   aaacaaacACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                                     <  2:296061/140‑1 (MQ=255)
                                                                                                   aaacaaacACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                                     <  2:552292/140‑1 (MQ=255)
                                                                                                   aaaCACAACCGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AAGTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                                     <  2:2100770/140‑1 (MQ=255)
                                                                                                   aaaCAAAACCGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTTAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                                     <  1:497499/140‑1 (MQ=255)
                                                                                                   aaaCAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATTT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                                     <  2:377883/140‑1 (MQ=255)
                                                                                                   aaaCAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                                     <  2:503242/140‑1 (MQ=255)
                                                                                                   aaaCAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                                     <  1:10587/140‑1 (MQ=255)
                                                                                                   aaaCAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                                     <  2:2346507/140‑1 (MQ=255)
                                                                                                   aaaCAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                                     <  2:2250350/140‑1 (MQ=255)
                                                                                                   aaaCAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                                     <  2:1385845/140‑1 (MQ=255)
                                                                                                   aaaCAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                                     <  1:1462138/140‑1 (MQ=255)
                                                                                                   aaaCAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACGACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTgg                                     <  2:2289731/140‑1 (MQ=255)
                                                                                                    aaCAAAAACGCCTGGGAAACCGGGCGTGTTTTTGTTGTTTTTTTTGT‑AAATAATACAAAT‑TTTAAAAATACGGGAAAAAAAAACCAATTAAGTGCAAAATATTTTATTGTAATTTTATGTTGGTAAAATTTGTttttttg                                    >  2:1742119/1‑137 (MQ=255)
                                                                                                        accaCGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATGACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAACTATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGtt                                <  1:3025115/137‑1 (MQ=255)
                                                                                                        aacaCGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGtt                                <  1:665243/137‑1 (MQ=255)
                                                                                                         aaaCGCCTGGGAAACCGGGCGTGTTTTTGGTATTTTTTTAGT‑AATTACTACAAATATTTAAAATTAGGGCAAAAAATACCCATTTA‑TTACAAAATATTTTGTTGTTATTTTTTGTAGGTGAAAATTGTAGTTTGGCGttg                               >  2:69759/1‑139 (MQ=255)
                                                                                                           aCGCCTGGGAAACCGGGCGTTTTTTTTTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCag                             <  2:776930/140‑1 (MQ=255)
                                                                                                           aCGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCag                             <  2:887961/140‑1 (MQ=255)
                                                                                                           aCGCCTGGGAAACCGGGCGTGTTTTTTGTGTTTTTTTTTT‑AAATAATAAAAAT‑TTTTAAAATAAGGGAAAAAAATGCCATTTAATTCAAAAAAATTTTTTTTTAATTTTATGTTTGTAAAAATTGTATTTTGCCGTTTag                             >  2:2040515/1‑140 (MQ=255)
                                                                                                             gCCTGGGAAACCGGGCTTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                           <  2:219393/140‑1 (MQ=255)
                                                                                                             gCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                           <  1:933301/140‑1 (MQ=255)
                                                                                                             gCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                           <  1:1619891/140‑1 (MQ=255)
                                                                                                             gCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                           <  2:2619213/140‑1 (MQ=255)
                                                                                                             gCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                           <  2:4062/140‑1 (MQ=255)
                                                                                                             gCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                           <  2:1510448/140‑1 (MQ=255)
                                                                                                             gCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                           <  2:2002022/140‑1 (MQ=255)
                                                                                                             gCCTGGGAAACCGGGAGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCagag                           <  1:2248718/140‑1 (MQ=255)
                                                                                                                  ggAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGt                      <  1:1279390/140‑1 (MQ=255)
                                                                                                                            cGTTTTTTTGTTCTTTTTTCTGT‑AATGACTACAAAT‑TTCAAAAATACGGGAAAAACATGCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCGGTTCAGAGGAGGTGAAAAGCggg            <  1:2461434/140‑1 (MQ=255)
                                                                                                                            cGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCggg            <  1:2461464/140‑1 (MQ=255)
                                                                                                                            cGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCggg            <  1:1308075/140‑1 (MQ=255)
                                                                                                                                      ttCTTTTTTATGT‑AATTACTACAAAT‑TTTAAAAATAAGGGAAAAAAATACCATTTACTTCCAAAAAATTTGATGGTAATTTTAATTAGGTAAAATTTGTATTTGGCCGTTAAGAGGCTGTGAAAAGCGGTCAGGCATGaa  >  2:113789/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                           
CTGGAAAGCTCTAAAGCTTACTATGATTGGCTGAAACGGCTTGCTGAATCGGTG‑CAGAGCGGGGAAATTTTTAAATTTATACCGATTGAAACAAAGTAAAACAAAAACGCCTGGGAAACCGGGCGTTTTTTTGTTCTTTTTTATGT‑AATTACTACAAAT‑TTGAAAAATACGGGAAAAACATCCCATTTACTTCCAAAATATTTGATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCGTTCAGAGGAGGTGAAAAGCGGGCAGGCCTGAA  >  NZ_CP034943/2991101‑2991373

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑