Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP034943 | 549,080 | 0 | G | T | 25.1% | 421.8 / 25.9 | 212 | R31L (CGT→CTT) | EO946_RS02865 | PLP‑dependent aminotransferase family protein |
Reads supporting (aligned to +/- strand): ref base G (80/78); new base T (0/53); total (80/132) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.85e-14 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 212 total aligned reads displayed.
AGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTT > NZ_CP034943/548942‑549218 | ccAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACTCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCACAGAATACATGCATCAGGGGCGTAt > 1:2221350/1‑140 (MQ=255) ccAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTAt > 1:2711296/1‑140 (MQ=255) ccAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTAt > 1:2837935/1‑140 (MQ=255) ccAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTAt > 2:2353787/1‑140 (MQ=255) gTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCa < 1:2353787/140‑1 (MQ=255) tttCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCaaa < 1:2024144/140‑1 (MQ=255) tttCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTACGCTTTATCATCATCTTTATCGCTATTTCAAAGAAAACATGCATCAGGCGCGTATTCaaa < 2:318494/140‑1 (MQ=255) ttCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCaaaa < 1:2133422/140‑1 (MQ=255) ttCACAAAAAAATGCATACCAGTTAGGAGAAAAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCaaaa < 1:801691/140‑1 (MQ=255) ttCACAAAAAAATGCAGACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCaaaa < 1:463647/140‑1 (MQ=255) cacaAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAg > 1:1225459/1‑140 (MQ=255) cacaAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAg > 1:92584/1‑140 (MQ=255) caAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGa > 2:2751349/1‑140 (MQ=255) aaaaaTGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGTATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATg < 1:955626/140‑1 (MQ=255) aaaaTGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATATAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCAGCAGGGGCGTATTCAAATAGGAATGa > 1:1453247/1‑140 (MQ=255) aaTGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAg < 1:1795790/140‑1 (MQ=255) gCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTc < 2:1486867/140‑1 (MQ=255) gCATAACAGTTAGGAGAACAACCCACATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTc < 2:2175293/140‑1 (MQ=255) aTACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTccc < 1:2585347/140‑1 (MQ=255) tAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCaaaa < 2:1224534/140‑1 (MQ=255) tAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCaaaa < 1:1635455/140‑1 (MQ=255) tAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCaaaa < 1:300605/140‑1 (MQ=255) aGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAg > 1:1493619/1‑140 (MQ=255) aGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAg > 1:2551710/1‑140 (MQ=255) ggAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGa < 2:3155888/140‑1 (MQ=255) agaACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTCTCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACt < 2:1333312/140‑1 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTcc > 2:1365123/1‑140 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTcc > 2:1033623/1‑140 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTcc > 2:2494953/1‑140 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTcc > 1:2436407/1‑140 (MQ=255) caacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTg > 1:1656691/1‑140 (MQ=255) caacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTGTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTg > 1:3041471/1‑140 (MQ=255) aacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAATACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTgg > 1:1700251/1‑140 (MQ=255) aacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATTAAGCTCCCTTCCAAAAGACTCCTgg > 2:2627248/1‑140 (MQ=255) aacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTgg > 1:1352702/1‑140 (MQ=255) aacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTGTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTgg > 2:3141677/1‑140 (MQ=255) ccAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATAGTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGa < 1:2769642/140‑1 (MQ=255) cAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAg > 2:707710/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTgg < 1:2447631/128‑1 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTgg > 2:2447631/1‑128 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 1:2896686/1‑140 (MQ=255) atCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTc > 1:877316/1‑140 (MQ=255) atCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTc > 2:2205053/1‑140 (MQ=255) atCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTc > 1:2043720/1‑140 (MQ=255) cACGCCTTTTGTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCa < 2:3331373/140‑1 (MQ=255) cGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc < 2:2837935/140‑1 (MQ=255) ttttGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCAATCAGTCaa > 1:764021/1‑140 (MQ=255) tttCAATAGAAATCTGTATATTCCGCTTTATCAGCTGATTTATCGCTATTACAAAGAAAACATGCATCAGGGGCTTATTCAAAAAGGAATGAAGCTCCCTTCCAAACGACTCCGGGCGAGACAGCTTACCATCAGTCaaa < 2:787723/140‑1 (MQ=255) tttaaTATAAATCTGGATATTCCGCTTTATCAGCAGATTTATCGCTATTTCAAACAAAACATGCATCAGGGGCGTATTCAAAAAGGATTGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAAc < 2:2896686/137‑1 (MQ=255) tttaaTAGAATTCTGGATATTCCGCTTTATCAGCAGCTTTATCGATATTTCAAACAAAACATGCATCAGGGGCTTATTCAAAAAGCAATTAAGCTCCCTTCCAAAACACTCCTGGCGAGTCAGATTTCCATCAGTCacac < 2:575888/137‑1 (MQ=255) ttGAATATAATTCTGGATATTCCGATTTATCAGCAGCTTTATCGCTATTACAAATAAAACATGCATCAGGGGCTTATACAAAAAGTAATGAAGCTCCCTTCCAAAACACTCCTGGCGTGTCAGATTTCCATCAGTCAAAc < 2:2870097/140‑1 (MQ=255) gAATACAAATCTGGATATTCCTCTTTATCAGCAGGTTTATCGCTATTTCAAATAAAAAATGCATCAGGGGCGTTTTAAAAAAGGATTGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTAAGGTTGCCATCAGACAAACGa < 2:1183004/140‑1 (MQ=255) tctaaaTCTGGATTTTCCGCTTTATCAGCAGCTTTATCGATATTTCAAAGAAAACATGCATCAGGGGCTTATACAAAAAGGAATGAAGCGCCCTTCCAAACGACTCCTGGCGAGTCAGCTTCCCATCAGACACACGACTg < 2:3433905/137‑1 (MQ=255) ctgtttatTCCTATTTAAAAGCAGCTTTATCGATATTAAAAAGAAAACATCAATCCGGGGCTTATACAAAAAGTAATGAAGCTCCCTACAAAAACACTCCTGGCGAGTCAGATTTCCAACAGTCAAACGACTGTAGAACg < 2:2551710/135‑1 (MQ=255) cTGTATATTCCTCTTTATCAGCAGCTTTATCGATATTTAAAAGAAAAAATGCAACAGGGGCTTATTAAAAAAGTAATGACGCTCCCTTCAAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACg < 2:1493619/140‑1 (MQ=255) cTGGATTTTCCGCTATATCAGCATCTTTATCGCTTTTTCAATGAAAACATGCATCCGGGGCTTATTCAAACAGCAATGAAGCTCCCTTCAAACACACTCCCCGCGAGAAAGCTTTCCATCCTTCAAACGACTGTAGAACg < 2:1674662/140‑1 (MQ=255) cTGGATATTCCGCTTTATCAGCCGCTTTATCGCTATTTAAAATAAAACATGCATCAGGGGCTTATTAAAAAAGTAATGAAGCTCCCTTCCAAACCACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACg < 2:165628/140‑1 (MQ=255) tGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGt > 2:3128115/1‑140 (MQ=255) ggATATTCCGCTTTATCAGCAGCTTTATCGATTTTACAAACAAAAAATGCATCAGGGGCTTATTAAAAAAGTAATTAAGCTCCCTTCCAAAACACTCCTGGCGAGTCAGCTTTCCAACAGTCACACGACTGTAGAACGTg < 2:445988/140‑1 (MQ=255) cGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGaa > 2:2429837/1‑140 (MQ=255) gCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGact > 1:2428614/1‑138 (MQ=255) tATCAGCAGCTTTATCGCTATTACAAATAAAACATGCATCCGGGGCTTATTAAAAAAGCAATGAAGCTCCCTTCAAAAACCCTCCTGGCGAGTCAGCTTACCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCt < 2:12734/140‑1 (MQ=255) ccaccagcATTTTCGCTATTTAAACCAAAACATGCATCGGGGGCTTATTCAAAAATCAATCAAGCTCCCTCCAAAAAGCCTCGTGGCGCTCCAGCTTCCCACCACTCCCACGACTGTAGAACGTGCCTATGAACATCTtg < 2:467302/136‑1 (MQ=255) ttgtttATCGATATTTCAAACAAAACCTGAATCCGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCAAAAAGACTCCGGCCGAGTCAGCGTACCAACAGCCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:2375388/137‑1 (MQ=255) tgttttAGCGCTATTTCAAAGAAAACAGGCATCCGGGGCGTATTAAAAAAGGATTGAAGCTCCCTTCCAAACGACTCCTGGCGAGTCAGCTTGCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:2245583/137‑1 (MQ=255) atttttATCGCTATTTCAAACAAAACAGGCATCTGGGGCTTATTAAAAATGAAATGACGCGCCCTTCAAAAACACTCCTGGCTTGTCAGATTTCCATCTTACAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:484573/137‑1 (MQ=255) agcTTTCTCGCTATTACAAAGAAAACATGCATCAGGGGCTTATTCAAAATGGAAGTAAGAGCGCTTCCAAAAGACTCCGGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:504346/140‑1 (MQ=255) agcTTTATGGCTATTACAAAGAAAACCTGCATCAGGGGCTTATTCAAAAAGTAATTAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCAACAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:1642348/140‑1 (MQ=255) agcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:2043720/140‑1 (MQ=255) agcTTTATCGATATTAAAAATAAAACATGCAACCGGGGCTTATCAAAAAAGGAATCACCCCCCCTCCAAAAACACGCCGGGCGAGTCAGCTTCCCAACAGCCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:1033623/140‑1 (MQ=255) agcTTTAGCGATATTACAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTGCCAAAAGCCTCCTGGCGATTCAGCTTTCCATCTGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:1540680/140‑1 (MQ=255) ttttATCCTTATTTCAAATAAAACATGCATCAGGGGCTTATTCAAAAATCAATGAAGCTCCCTTCCAAAAGACCCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:2986116/139‑1 (MQ=255) gtttAGCGCTTTTTCAAAGAAAACATGAATCAGGGGCTTATTCAAAAAGGAATGAAGCTCCCGTCCAAAACACTCCTGGCGAGTCAGCTTTCCACCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:2768929/139‑1 (MQ=255) cTTTATCTCTATTTAAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCACCCTTCCAAAAGACTCCTGGCGAGTCAGCTTGCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:3041471/140‑1 (MQ=255) cTTTATCGATATTTCAAATAAAACAGGCATCAGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCAAAACACTCCGGGCGAGTCAGCTTTCCATCAGCCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:2472548/140‑1 (MQ=255) cTTTATCGATATTTAAAATAAAACATGCATCCGGGGCTTATTCAAAAAGGAATGAAGCTCCCTACCAAACTACTCCTGGCGTGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:1740725/140‑1 (MQ=255) cTTTATAGCAATTTCAAATAAAACATGAATCTGGGGGGTATACAAAAATTTTTCAAGCTCACTTCAACAACACGCCGGGGGATTCAGCTTCCCATCCCTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:2951819/140‑1 (MQ=255) cTTTAGCGCTATTACAAACAAAACAGGCATCCGGGGCGTTTAAAAAAAGGAAGGAAGCTCCCTTCCAAACCACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 1:2277111/140‑1 (MQ=255) taccccTATTAAAAACAAAACATGCATCCGGGGCTTATTAAAAAAGTAATGACGCCCCCTTCAAAAAGCCTCCTGGCTTTTAAGATTACCATAAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAggg < 1:314272/135‑1 (MQ=255) tATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAggg > 1:2109273/1‑140 (MQ=255) tCGCTATTTAAAATAAAACATCCATCAGGGGCTTATTAAAAAAGTAATGAAGCTCCCTTCCAAAACACTCCTGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt < 2:3213634/140‑1 (MQ=255) tCGCTAGTACACACAAACCATGAAGCCGGGGCCTAAACAAAACGGCCTGAAGCTCCCTACCAACACACACCTGGCGCGTCAGCTTTCCAACAGTCAAACGACTGTAGAACGTGCCTCTGAACAGCTTGCTGCTGAGGGCt < 2:1878260/140‑1 (MQ=255) tCGATATTTCAAATAAAACCTGCATCCGGGGCTTATTCAAAAAGGACTGAAGCTCCCTTCCAATTGACTCCGGGGGTGTCAGCTTTCCATCTTACAAACGACTGTAGAACGTGCCTATGAAGAGCTTGCTGCTGAGGGCt < 2:108593/140‑1 (MQ=255) acGCTATTACAACCAAAACAGGCATCCGGGGCTTATACAAACCGCAATGAAGCGCCCTTCCAAACGACCCGGGGCCCGTCAGCTTCCCAACAGCCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt < 1:643008/139‑1 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTAtctc > 1:703506/1‑140 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 2:752249/1‑140 (MQ=255) tttCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGTCTATATct > 1:1743276/1‑139 (MQ=255) aataaaaCATGCTTCCGGGGCGTATTAAAAAAGGAATTAAGCTCCCTCACAAAAGACTCCTGGCGAGTCAGCTTTCCAACAGTAACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 2:2826049/137‑1 (MQ=255) aaGAAAACATCCATCAGGGGCTTATACAAAAAGTAATTAAGCCCCGTTCCAAAACACTCGGGGCGAGTCAGATTTCCATCACTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:1374367/140‑1 (MQ=255) aaCATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGcc > 1:58692/1‑140 (MQ=255) aaCATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTAAGCTTTCCATCAGACAAACGACTGTAGACCGTGCCTATGAACAGCTGTCTGCTGAGGGGTCTCTCGTGAGCACGcc > 2:2581122/1‑140 (MQ=255) caggCATCCGGGGGGTTTTAAAAAAGGAATCACGCTCCCTTCCAAACCCGCCGTGGCCAGGAAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaa < 2:2075623/137‑1 (MQ=255) cATGCATCAGGGGCGTATTCAAAAAGGAATTAAGCGCCCTTCAAACACACTCCTGGCTAGTCAGCTTTCAATCCTTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaa < 2:939380/140‑1 (MQ=255) cATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaa < 2:2436407/140‑1 (MQ=255) cATGAATCCGGGGCGTATAAAAAAAGTAATCACCCCCCCTACCAAACCCCTCCGGGCGAGTCAGGTTTCCACCAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaa < 1:3128115/140‑1 (MQ=255) aTGAATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCGTGGCGTGTCAGGTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaag < 1:2873342/140‑1 (MQ=255) tgaaTCTGGGGCTTATAAAAAAAGCAATGAAGCTCCCTTCCAACAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaaga < 1:3367578/137‑1 (MQ=255) tGCATCAGGGGCGTATTCAAAACGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCAACAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaaga < 1:2535831/140‑1 (MQ=255) gggCGTATTCAAAAAGCAAGGAAGCTCCCTCCCAAAACACTCCTGGCGCGTCAGCTTTCCACCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATg < 2:17834/140‑1 (MQ=255) cGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGtt > 2:2975122/1‑140 (MQ=255) | AGCCAGTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTT > NZ_CP034943/548942‑549218 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |