| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 755,531 | A→C | 9.9% | Q22H (CAA→CAC) | EO946_RS03880 → | rhamnogalacturonan acetylesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 755,531 | 0 | A | C | 9.9% | 519.8 / 6.1 | 229 | Q22H (CAA→CAC) | EO946_RS03880 | rhamnogalacturonan acetylesterase |
| Reads supporting (aligned to +/- strand): ref base A (151/40); new base C (4/31); total (155/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.03e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 237 total aligned reads displayed.
CACCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCGGAT > NZ_CP034943/755392‑755669 | cACCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGACTGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCaa > 1:786664/1‑140 (MQ=255)cACCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCaa > 1:4332609/1‑140 (MQ=255) ccGTTTTTTTCATGGTAAGAGCTGTAATTGTTTGATGCCATATTAAACTAAAAAAACGAGGGGGAATGAGAAATGGAAAATCACATTTATCTTGCTTGCGATTAAACTGTTCAAACGTATGGAGACAGCACAAATCAAgg < 2:3191615/140‑1 (MQ=255) ccGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAgg < 1:4015092/140‑1 (MQ=255) ttttCAAGTGAATAGCTGTCCTTGTTTGATGGCATATGTAACGAAAACAACGAGAGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCATCTGTTCATACGTATGGAGACTGCAGAAATGTAGGGGGGTg < 2:2513681/140‑1 (MQ=255) ttttCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTg > 1:4171303/1‑140 (MQ=255) gggAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACACCACAAATCAAGGGGGGTGGGGGCAg > 2:3871926/1‑140 (MQ=255) agCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCATGCTGGCGATTCAACTGTTCAAACGTATTGATACAGCACAAATCAAGCGGGGTGGGGGCAGTAtctc > 2:3386845/1‑140 (MQ=255) tttCCATTATTGATGCAATATGAAACCAAAAAAACGAGGGGTAATGAGAAATGGCAAATCACATTTATCTTGTTGGCGATTCAACTGTACAACCGTATGGCGCCAGCACAAATCACGGGGGGTGGGGGCAGTTTCTCGGc < 1:2007977/138‑1 (MQ=255) tgtcactgatttatGCCAAATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATAACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACACCACAAATCCAGGGGGGTGGGGGCAGTTTCTCGGc < 1:1090131/134‑1 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAATCGAGGGGGACTGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 1:1663017/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 1:2926774/1‑140 (MQ=255) tCCATGATTGATGCCAGATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGGTCAAACGTATGGAGACAGCACCAATCACGGGGGGTGGGGGCAGTTTCTCGGCTc > 2:1598393/1‑140 (MQ=255) cATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCACACGTATGGAGACAGCACAAATCCAGGGGGGTGGGGGCAGTTTCTCGGCTCGc > 2:526831/1‑140 (MQ=255) aTGATTGATTCCATATGAAACGAAAAAAACGAGGGGGAATTAGAAATCGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCa < 2:557354/140‑1 (MQ=255) ttattccATTTGAAACTAAAAAAACGAGGGTGAATGAGAAATCGCAAATCACTTTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGGGGGGGCAGTTTCTCGGCTCGCATCTGc < 2:2868224/135‑1 (MQ=255) tattaattatGAAACGAAAAAAACTAGTCGGAATTTTAAATGTCTATTCTTTTTTATGTTGCTGTGTATTAACCAATACAAACGTTTCTATACAGCTAAAATCCATGCGGCTGGGGGCAGTTTCTCGGCTCGCATCTGcc < 2:1082390/133‑1 (MQ=255) gatCCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGCCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTAGGGACCCAGCACACATCCCGGGGGGGGGGGGCAGTTTCTCGGCTCGCATCTGcc < 1:2806628/140‑1 (MQ=255) atGCGATATGAAAGGAAAAAAACGAGGGGGAAAGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACCGCAGACATCAAGGGGGGTGGGGGCAGGTTCTCGGCTCGCATCTGCCg > 2:219430/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGACTGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAA‑GGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCgg > 1:2483341/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTCTGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTGCGGGGGTCGCATCTGCCg > 2:3598147/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:4092645/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:3898953/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:3181450/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:3260394/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:3556194/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:2056466/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:2450516/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:1240939/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGAGTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCCTCTGCCg > 2:3559843/1‑140 (MQ=255) tcactatGAAACGAAAAAAACGAGGGGGAATGAGAAATGCCAAATCACATTTATCTTGCTGGCGAGTCACCTGTTCAACCGTATGGAGACAGCACAAAGCCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGa < 1:3363291/136‑1 (MQ=255) tacctatGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTTGCTATTCAACTGTTCAAACGTATGGAGACAGCACAACTCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGa < 2:2898806/136‑1 (MQ=255) gCCATATGAAACGAAAAAAACGCGGGGGATTGATAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGa < 2:2562792/140‑1 (MQ=255) gCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACCGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGa > 1:2781814/1‑140 (MQ=255) gCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGGGGGGGCAGTTTCTCGGCTCGCATCTGCCGGa > 1:1011929/1‑140 (MQ=255) atatTAAACGAATAATACGAGGTGGAATGAGAAATGTCAAATCACATTTATGTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAAGCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCa < 2:2306706/140‑1 (MQ=255) atatTAAACGAAAAAAACTAGTGTGTTTGAGATATGGCTAATCACATTTATCTTGCTGGCGATTCACCTGTTCAAACGTATGGAGACACCACACACCCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCa < 2:2168496/140‑1 (MQ=255) atatGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCa > 1:2630366/1‑140 (MQ=255) tatGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCat > 1:4125357/1‑140 (MQ=255) caaCCAAAAAAACGAGGGGGAACGAGAAACGGCAACTCACATTTAGCGTGCTGGCGATTCACCTGCTCAAACGTATGCAGACAGCACAAATCCCGGGGGGGGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 1:3667022/139‑1 (MQ=255) aaaaGAAAAAAACGAGGGTGAATTAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAACCACGGCGGGGGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:2984811/140‑1 (MQ=255) aaaCGAAAAAAACGAGGGGGAATGATATATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGGATGGAGACAGCACCAATCCAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:313852/140‑1 (MQ=255) aaaCGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACTTTTATCTTGCTGGCGATTCAACTGTTCAAAGGTATGGAGAAACCACAAATCAAGGGGCGTGGGGGCATTGTCTCGGCTCGAAACTGACGGAGCATAtta > 2:2748905/1‑139 (MQ=255) aaaCGAAAAAAACGAGGGGGAAAGAGAAATCGCAAATCACCTGTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAAGCCCGGGGGGGGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 1:3712949/140‑1 (MQ=255) aaaCCAAAAAAACGAGGGCGAATGAGAAATCGCAAATCACATTTATCTTGCTGGCGATTCACCTGTTCAAACGTATGGAGACAGCACAACTCAAGGGGGGCGGGGGCAGGTTCTCGGCTCGCATCTGCCGGAGCATATTc < 1:5405/140‑1 (MQ=255) acccaaacaaCGAGGCGGACTGAGAAAGGGCAAATCACATTTATCGTGCTGGCGATTCAACTGTTCACCCGTCTGGAGCCAGCACAACTCCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCaa < 2:2056466/136‑1 (MQ=255) accaaaaaaaCGAGGCGGAAGGACAAATCGCAAATCACCTTTATCTGGCGGCCCATTCAACGGTTCACCCGTATGGCGACAGCACAAATCACGGGGGGGGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCaa < 1:465226/137‑1 (MQ=255) aCGAAAAAAACGACGGGGAATGAGAAATGGCAAATCACATATATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCaa > 2:1764790/1‑140 (MQ=255) ccaaaaaaaCGAGGGGGACTGACCCATGGCAAATCACATGTATCTTGCTGGCGATTCAACTGTTCAACCGTATGGACACAGCACACAGCCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAg < 1:2355905/138‑1 (MQ=255) aaCGAGGGGCAACGACAAATGCCAAATCCCAATTATCTTGCTGGCGACTCCACTCTACCACCGTCTCGACACACCACAAACCCCGGGGGGGGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTaa < 1:3768438/140‑1 (MQ=255) ggggACTGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAACTCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGc > 1:13979/1‑140 (MQ=255) ggggAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGc > 1:236036/1‑140 (MQ=255) ggggAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTAAGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGc > 1:887168/1‑140 (MQ=255) ggAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCaa > 2:3044117/1‑140 (MQ=255) tGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCCAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCCAGTGATTAACAGAGCAATCGGGGgacga > 2:3449561/1‑140 (MQ=255) ggCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGgaagaa > 1:1806681/1‑140 (MQ=255) tCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGa > 1:3012305/1‑140 (MQ=255) cTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGaa > 2:1396971/1‑140 (MQ=255) ggCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGATCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAaga > 1:854955/1‑140 (MQ=255) ggCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAaga > 1:190767/1‑140 (MQ=255) ggCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAaga > 1:189420/1‑140 (MQ=255) gacacaccTGCTCACACGTATGGCGACCCGACCACTCACCGGCGGTCGCGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGAGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAggg < 1:1463633/133‑1 (MQ=255) gATTCTACTTTTCAAACGTATGGAGACAGCACAACTCCCGCGCGGTGGGGGCCGTTTCTCGGCTCGCATCTTCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAggg < 2:4076775/140‑1 (MQ=255) ttCAACTGTTCAAACGTATGGACACAGAACACATCAAGGCGGGTGGGTGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCa < 2:1484320/140‑1 (MQ=255) ctcttCAACCGTATGGACACAGCACACCTCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCtt < 2:2798983/137‑1 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 1:3836552/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 1:3633258/1‑140 (MQ=255) cAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGACGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGc > 1:4305858/1‑140 (MQ=255) cAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGc > 2:4024880/1‑140 (MQ=255) tATGTAGACAGCACCAATCCAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCt < 2:1572997/140‑1 (MQ=255) tATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCt > 2:6665/1‑140 (MQ=255) tATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCt > 2:224761/1‑140 (MQ=255) tATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCt > 2:613848/1‑140 (MQ=255) tATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCt > 2:4266669/1‑140 (MQ=255) gaTGGAGACACCACCACTCCAGGGCGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCt < 2:3466119/139‑1 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGa > 2:3696634/1‑57 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 2:2854362/1‑140 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 1:1218867/1‑140 (MQ=255) aCAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGAtgtg > 1:2892994/1‑140 (MQ=255) aCAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAAGCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGAtgtg > 1:3524281/1‑140 (MQ=255) aaaacaAATCAAGCGGGGTGGGTGCATTTTATAGACACGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:1938425/4‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:841500/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:1798716/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:1357301/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:1141240/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:101760/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:958607/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:618270/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:4257407/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:2282035/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:1769466/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:1391407/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 2:2750559/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 2:1875578/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 1:1266366/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 1:3076593/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 1:2160128/1‑140 (MQ=255) aTCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCg > 2:3325466/1‑140 (MQ=255) aTCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCg > 2:3796866/1‑140 (MQ=255) aaGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCGGAt > 1:1022687/1‑140 (MQ=255) | CACCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCGGAT > NZ_CP034943/755392‑755669 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |