| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 822,230 | T→G | 6.2% | A252A (GCT→GCG) | EO946_RS04190 → | sodium:alanine symporter family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 822,230 | 0 | T | G | 6.2% | 716.9 / 2.1 | 283 | A252A (GCT→GCG) | EO946_RS04190 | sodium:alanine symporter family protein |
| Reads supporting (aligned to +/- strand): ref base T (106/143); new base G (31/2); total (138/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.54e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 284 total aligned reads displayed.
AGTAACAGAGTTTGTCGTGCCTCTTATGGCAGGGGCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTGTAAGGCAA > NZ_CP034943/822095‑822368 | aGTAACAGAGTTTGTCGTGCCTCTTATGGCAGGGGCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTg < 2:671530/140‑1 (MQ=255) gTAACAGAGTTTGTCGTGCCTCTTATGGCAGGGGCATACGTGGGAGCCGGTGTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTGTGTGTTTTCTTTTCGAATGGGTTTACCTGTTCTTCAGCtggtgg > 1:3146986/1‑140 (MQ=255) tGTCGTGCCTCTTATGGCAGGGGCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTg > 1:2990569/1‑140 (MQ=255) tGTCGTGCCTCTTATGGCAGGGGCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTACAGCGGTTGGAGGATTCGCTg > 2:831467/1‑140 (MQ=255) tGTCGTGCCTCTTATGGCAGGGGCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTAACTCTTCTTGAGCTGTTGGAGGATTCGCTg > 1:2579540/1‑140 (MQ=255) cgcccTCGTATGGCAGGGGCCTCCGTGGGAGCCGCTCTCCACCGTGTTCTGCTGACCCTTTCAGCAGTGCCGGCGTTTTTCTCTCTGATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTGGGAGGATTCGCTGgcgc < 1:2499428/137‑1 (MQ=255) gCCTCTTATGGCAGGGGCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGgcg > 2:2600658/1‑137 (MQ=255) gCCTCTTATGGCAGGGGCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGgcg > 2:3895183/1‑137 (MQ=255) gCCTCTTATGGCAGGGGCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTAAGCTGTTGGAGGATTCGCTGGCGCTg > 2:4102430/1‑140 (MQ=255) ctctTATGGCAGGGGCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGcc < 1:1962158/140‑1 (MQ=255) ctctTATGGCAGGGGCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGcc < 1:689634/140‑1 (MQ=255) ctctTATGGCAGGGGCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGcc < 2:370780/140‑1 (MQ=255) ctctTATGGCAGGGGCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGcc < 1:1982337/140‑1 (MQ=255) ctctTATGGCAGGGGCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGcc < 1:1744580/140‑1 (MQ=255) ctctTATGGCAGGGGCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGcc < 2:1956000/140‑1 (MQ=255) ggggCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTGGCGCGTATCTTTTAGAATGCGTTTAACTCTTCTTCAGCGGTTGGGGGATTCGCTGGCGCTGCCCTGGCTGAAAc > 1:2189031/1‑140 (MQ=255) ggggCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTGTTTGTCTCTTATCTTTTAGAATGCGTTTAACTCTTCTTAAGCGGTTTGAGGATTAGCTGGCGCTGCCCTGGCTGAAAc > 1:1205384/1‑140 (MQ=255) gggCATACGTGGGAGCCGGTCTCCTCATTTTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTATCAGTTATCTTTTAGAAATCGTTTAAATAATAGTCATCTGTTGGATGATTATCTTGCGCTGCCCTGGCTGAAAcc > 1:4209349/1‑140 (MQ=255) gggCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTGTCTCTTATCTTTTCGAATTCGTTTACCGATTCTTCAGCTGTTTGAGGATTAGCTGGCGCTGCCCTGGCTGaaaac > 1:2218992/1‑138 (MQ=255) gggCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTGTCTTATCTTTTCCAATTCGTTTACCTCGTATTAAGCTGTTGGATGATTACCTGGCGCTGCCCTTGCTGAAAcc > 1:3928626/1‑140 (MQ=255) gggCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTGTTCAGCGGGTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAAcc > 1:1936670/1‑140 (MQ=255) gggCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGgcg > 2:4299952/1‑123 (MQ=255) gggCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGgcg < 1:4279093/123‑1 (MQ=255) gggCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGTAAcc > 2:2651802/1‑140 (MQ=255) gggCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTATCTCTTATCTTTTAGAATTCGTTTAACTCTTCTTCAGGGGTTGGAGGATTAGCTGGCGCTGCCCTGGCTGAAAcc > 1:2765965/1‑140 (MQ=255) ggCATACGTGGGAGCCCGTCTCCTCATTGTACTGATTAACCTTTCATCAGTGCAGTCGTTTTTCTCTCTTATCTTTTAGAATTGGTTTAACTCTTCTTCAGCTGATGGATGATTCCCTTGCGCTGACCTGGCTTAAACCg > 2:1823395/1‑140 (MQ=255) tACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTGTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCg < 1:898050/140‑1 (MQ=255) cGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTGGTATCTTTTCGAATTCGTTTAACTCTTCTTGAGCGTTTGGAGGATTCGCTGGCCCTGCCCTGGCTTAAACCGTTCggg > 1:4065887/1‑138 (MQ=255) cGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTAGAATTCGGTTACCTCTTCTTCAGCGGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCt > 1:3649854/1‑140 (MQ=255) ggAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGGGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTgggg > 2:3169967/1‑140 (MQ=255) ggAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTGGCTgggg > 2:922480/1‑140 (MQ=255) ggAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCCAATGCGTTTACCTCTTCTAAAGCAGTTGGAGGATTCGCTGGCGCTGCCCATGCTGAAACCGGTCGCGgggg > 2:3012161/1‑140 (MQ=255) ggAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATATTTTAGAATTCGTTTACCTCTTCTTCAGCTGTTTGAGGATTCGCTGGCGCTGCCCTGGCTGTAACCGTTCGCGgggg > 1:1732101/1‑140 (MQ=255) ggAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTACCTTTTCGAATGCGTTTACCTCTTCTTCAGGTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGGTCGCTgggg > 2:605964/1‑140 (MQ=255) ggAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCGCGGCTCTGTTCGCATGGGGGTTCCTCTTCATCAGCGGTTGGAGGATTGGCTGGCGCTGGGCTGGGTGGAAACGTTGGCTgggg > 2:3375544/1‑140 (MQ=255) ggAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCACTCTTATATTTTCGAATTCGTTTACCGCTTCTTCAACTGTTGGAGGATTCGCATGCGCTGCCCTGGCAGAAACCCTTCGgggggg > 1:3059628/1‑140 (MQ=255) gAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTATCTCTTATCTTTTCTAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGa > 2:1416501/1‑140 (MQ=255) ccGGTCTCCTCATTGTTCTGATGAACCTTTCATCCGTGCCGGCGTTTTTGTCTCGTATCTTTTCGAATTCGGTTAAATGTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCAGGCTGAAAACGTGCGCTGGGGAttt > 1:1906948/1‑140 (MQ=255) ccGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCGGGGGAttt > 2:3420151/1‑140 (MQ=255) ggTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCCCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGc > 2:1664221/1‑140 (MQ=255) gTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTGTCTCTTATCTTTTGGAATGCGTTTACCTCTTCTTGAGCGGTTGGAGGATTGGGTGGCGCGGCCCGGGCTGAAACCGTTCGCGGGGGATTTTcc > 1:79695/1‑140 (MQ=255) tcctcATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCcgc < 2:1311113/140‑1 (MQ=255) tcATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCggg < 1:362867/140‑1 (MQ=255) tcATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCggg < 1:498165/140‑1 (MQ=255) tcATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCggg < 1:2672184/140‑1 (MQ=255) tcATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCggg < 1:3409806/140‑1 (MQ=255) tcATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCGGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCggg < 1:204405/140‑1 (MQ=255) aTTGTTCTGATGAACCTTTCATCAGTGCCGGCGTGTTTCTCTCTTATCTTGTCGAATGCGTTTACCTCTTCTTCATCTGTTGGAGGATTCGGTGGCGCTGCCCTGGCTTAAACCGTTCTCTGGTGATTTGCCCGCGGGCt < 2:1240916/140‑1 (MQ=255) aTTGGTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTAACTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCt < 2:2160670/140‑1 (MQ=255) ttGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTg < 2:1579010/140‑1 (MQ=255) ttGTTCTGATGAACCTTTCATCAGTGCCGGCGTGTTTCTCTCTTATCTTTTCGAATTGGGTTACCTCTTCTTGCGCGGTTGGAGGCTTCGCTGGCGCTGCCCGGGCTGAAAGCGTTAGCGGGGGATTTGGCCGCgggggg > 1:3535537/1‑137 (MQ=255) tGTTCTGATGAACCTTTCATCAGTGCCGGCGTGTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGCTTTGCCCGCGGGCTGt > 2:3773960/1‑140 (MQ=255) tgatgaACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCt > 2:2969054/1‑140 (MQ=255) tgatgaACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTAATCTGTTTGAGGATTCGCTGGCGCTGCCCAGGCTGAAACCGTTCGGGGGGGAGTTGCCCGCGGGCGGTATTCt > 2:57483/1‑140 (MQ=255) atgaACCTTTCATCAGTGCCGGCGTTTTTGTCTCTTATCTTTTCGAATGCGTTTACCGCGTCTTCAGCGGTTGGGGGATTGGCTGGCGCGGCCCTGGCGGGAACCCTTCGCGGGGGATTTTCCCGCGGGCTGTATTCTaa > 1:710105/1‑140 (MQ=255) atgaACCTTTCATCAGTGCCGGCGTTTTTGTCTCTTATATTTTGGAAATCGTTTTACACTTCTTAAGCTGTTTGAGGATTGGCTGGCGCTGCCCTGGCTGAAAACCTTCGCTGGGGCTTTTGCCCCGGGCGGTATTGTaa > 1:3276462/1‑140 (MQ=255) atgaACCTTTCATCAGTGCCGGCGTTTTTGTCGGTTATCGTTTCGAATGCGTTTACCTCATCTTAAGCTGTTGGAGGATTGGCTGGGGCTGCCCGGGCGGAAACCGGTCGCGGGGGATTTTGCCGCGGGCGGTATTGTaa > 1:2874718/1‑140 (MQ=255) atgaACCTTTCATCAGTGCCGGCGTTTTACACTCTTATCTTGTCGAATTCTTTTACCTCTTCTTGAGCTGTTGGAGGATTCGCATGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTTCCCGCGGGCTGTATTATaa > 2:3313893/1‑140 (MQ=255) aaCCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATTCGTTTACCTCTTCTTAAGCTGTTTGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTTCCCGCGGGCTGTATTCTAATGa > 2:521716/1‑140 (MQ=255) ccTTTCATCAGTGCCGGCGTTTTTGTCGCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTTGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAg > 2:1259393/1‑140 (MQ=255) ccTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAg < 2:2759061/140‑1 (MQ=255) ccTTTCATCAGTGCCGGCGTTTTTCTCGCTTATCTTTTCGAATTCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAg > 2:4172632/1‑140 (MQ=255) ccTTTCATCAGTGCCGGCGTGTTTGTGTCTTATCGTTTAGAATGCGGTTACCTCGTCTTCAGCGGTTGGTGGAGTGGCTGGCGCTGCCCTGGCTGAAACCCTTCGCGGGGGATTTGCCCGCGGGGGGTATTCTAATTAAg > 1:1725511/1‑140 (MQ=255) tttCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGcc < 2:2874718/140‑1 (MQ=255) tcaGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAAt < 1:2235246/140‑1 (MQ=255) tGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGa > 2:3225836/1‑140 (MQ=255) tGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGa < 1:3880553/140‑1 (MQ=255) tGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGGTCGCGGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGa > 2:2020763/1‑140 (MQ=255) ccGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAAc > 2:973371/1‑140 (MQ=255) gCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGc < 2:1771488/140‑1 (MQ=255) gCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGc > 2:3619858/1‑140 (MQ=255) ttCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGAt < 2:883403/140‑1 (MQ=255) tCGAATGCGTTTACCTCTTCGTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCggcggc < 2:3628993/140‑1 (MQ=255) gAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCaa < 2:1205384/140‑1 (MQ=255) aTGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCaaaa < 1:622609/140‑1 (MQ=255) aTGCGTTTACCTCTTCTTCAGCTGGTGGAGGATTCGCTGGCGCTGCCCTGGCTGTAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCaaaa < 2:4043980/140‑1 (MQ=255) tttACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGa < 2:3979201/140‑1 (MQ=255) ttACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGAt < 1:390317/140‑1 (MQ=255) aCCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGTCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCa < 1:3969426/140‑1 (MQ=255) aCCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCa < 1:1264776/140‑1 (MQ=255) aCCTCTTCTTCAGCTGGTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCa < 1:208412/140‑1 (MQ=255) ttcttcAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTg > 2:1146627/1‑140 (MQ=255) ttcttcAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTg > 2:1672358/1‑140 (MQ=255) ttcttcAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTg > 2:2247377/1‑140 (MQ=255) ttcttcAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCGGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTg > 2:1380906/1‑140 (MQ=255) tcttcAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTGt > 2:326379/1‑140 (MQ=255) cttcAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCa > 2:345701/1‑133 (MQ=255) cttcAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTGTa > 2:4002042/1‑140 (MQ=255) aGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTGTAAGGc < 1:1541141/140‑1 (MQ=255) aGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTGTAAGGc < 1:1019405/140‑1 (MQ=255) aGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTGTAAGGc < 1:1611130/140‑1 (MQ=255) aGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTGTAAGGc < 1:1081929/140‑1 (MQ=255) aGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTGTAAGGc < 1:3785074/140‑1 (MQ=255) aGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTGTAAGGc < 1:973371/140‑1 (MQ=255) aGCTGTTGGAGGATTCGCTGGCGCGGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTGTAAGGc < 2:2521196/140‑1 (MQ=255) aGCGGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCGAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTGTAAGGc < 2:2737954/140‑1 (MQ=255) gCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTGTAAGGCa < 2:1924138/140‑1 (MQ=255) cTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTGTAAGGCaa < 1:3371344/140‑1 (MQ=255) cTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTAGTCGAATGCAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTGTAAGGCaa < 2:2217487/140‑1 (MQ=255) cTGTTGGAGGATTAGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTGTAAGGCaa < 1:361683/140‑1 (MQ=255) | AGTAACAGAGTTTGTCGTGCCTCTTATGGCAGGGGCATACGTGGGAGCCGGTCTCCTCATTGTTCTGATGAACCTTTCATCAGTGCCGGCGTTTTTCTCTCTTATCTTTTCGAATGCGTTTACCTCTTCTTCAGCTGTTGGAGGATTCGCTGGCGCTGCCCTGGCTGAAACCGTTCGCTGGGGATTTGCCCGCGGGCTGTATTCTAATGAAGCCGGAATGGGAACCGCCCCGATTGCACATGCGGCGGCAAAAACGGATCACCCTGTAAGGCAA > NZ_CP034943/822095‑822368 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |