| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,046,159 | A→G | 6.5% | H73H (CAT→CAC) | EO946_RS05410 ← | HTH‑type transcriptional regulator Hpr |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,046,159 | 0 | A | G | 6.5% | 701.2 / 26.3 | 217 | H73H (CAT→CAC) | EO946_RS05410 | HTH‑type transcriptional regulator Hpr |
| Reads supporting (aligned to +/- strand): ref base A (78/124); new base G (7/7); total (86/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.82e-01 | |||||||||||
Only 100 of 229 total aligned reads displayed.
CTCAAGCAAGCTCCAGAATACCTCAGTGCCTTCCTCAGTCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATACGGTTTGAGCCACTGCTGCCAATCCTTCTCGATCGATTTCCAAA > NZ_CP034943/1046021‑1046298 | aatcaagcTCCAGAATACCTCAGTGCCTTCCTCAGTCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGTAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATAcatgca < 1:3598927/137‑1 (MQ=255) aagcaagcTCCAGAATACCTCAGTGCCTTCCTCAGTCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGTGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATAcatgca < 2:1070569/140‑1 (MQ=255) aagcaagcTCCAGAATACCTCAGTGCCTTCCTCAGTCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATAcatgca < 1:2179111/140‑1 (MQ=255) cAGAATACCTCGGTACCTTCCTCAGTCAATTGGACATATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCCCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACGTGCATGACCCCGaa > 1:467765/1‑140 (MQ=255) cAGAATACCTCGGTACCTTCCTCAGTCAATTGGACATATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCCCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACGTGCATGACCCCGaa > 1:949853/1‑140 (MQ=255) cAGAATACCTCGGTACCTTCCTCAGTCAATTGGACATATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCCCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACGTGCATGACCCCGaa > 1:1922910/1‑140 (MQ=255) ccTCAGTGCCTTCCTCAGTCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTcgcg < 2:1037844/140‑1 (MQ=255) ccTCAGTGCCTTCCTCAGTCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTcgcg > 2:2632120/1‑140 (MQ=255) cTCAGTGCCTTCCTCAGTCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGa > 2:3576427/1‑140 (MQ=255) cTCAGTGCCTTCCTCAGTCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGa > 2:1702718/1‑140 (MQ=255) cTCAGTGCCTTCCTCAGTCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGa > 1:3445803/1‑140 (MQ=255) cAGTGCCTTCCTCAGTCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGACAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGAtc > 1:2549648/1‑140 (MQ=255) cAGTGCCTTCCTCAGTCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGAtc > 2:2474127/1‑140 (MQ=255) tGCCTTCCTCAGTCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCa > 1:826071/1‑140 (MQ=255) tGCCTTCCTCAGTCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTGTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCa > 1:3660452/1‑140 (MQ=255) tCCTCAGTCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAAt > 1:62161/1‑140 (MQ=255) cTCAGTCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATgg < 2:4284310/140‑1 (MQ=255) aGTCACTTGGACGGATGTGGTCCCGTTAACATTCAGCCGTTTGGAGACCCTTACATATCCTCGTTCTTCCAGCATTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAAGTTCGCGATCTCAGAAATGGAAg < 2:2287587/140‑1 (MQ=255) aGTCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAg > 2:1196631/1‑140 (MQ=255) tcactgggACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTGAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCt < 1:3495342/134‑1 (MQ=255) tCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCt < 1:1678623/140‑1 (MQ=255) tCAATTGGACGAATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATCTCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCt < 1:1304909/140‑1 (MQ=255) aTTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCa < 2:1913765/140‑1 (MQ=255) aTTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCa < 2:4198557/140‑1 (MQ=255) aTTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCa < 2:668689/140‑1 (MQ=255) aTTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCa < 2:826071/140‑1 (MQ=255) tGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCAtt > 2:3934779/1‑140 (MQ=255) tGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCAtt > 2:3797910/1‑140 (MQ=255) aCGTATGTGTTCCGGTTATCATTCAGCCGTTGCGAGAACCTTAACTATCCTCGTTCTTCCAGCTTTTCTGCAAAGTTGACAGCGGTTGATACATGCATGACCCCGAAGTTCGCGAGCTCAGAAATGGAAGCTCCATTCaa < 1:1174386/140‑1 (MQ=255) aTGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGa > 2:3206334/1‑140 (MQ=255) aTGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGa > 2:613463/1‑140 (MQ=255) ttCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGc > 1:3867337/1‑140 (MQ=255) tCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCa > 1:3307642/1‑140 (MQ=255) ccGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCaa < 2:1126269/140‑1 (MQ=255) ccGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCaa < 1:3911564/140‑1 (MQ=255) cGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACTCAAt > 1:2520077/1‑140 (MQ=255) cGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAAt < 1:2365087/140‑1 (MQ=255) cGTTGATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAAt < 2:1905474/140‑1 (MQ=255) tttATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGAt < 1:441508/102‑1 (MQ=255) tttATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATcc > 1:675910/1‑140 (MQ=255) tttATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATcc > 2:1563570/1‑140 (MQ=255) ttATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTATTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCATAAATGGAAGCTCCATTCAATTGATACGCAATCCa < 2:4092822/140‑1 (MQ=255) cATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATaaa < 1:315194/140‑1 (MQ=255) tCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAata > 2:3222283/1‑140 (MQ=255) aGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATatg < 1:4212839/140‑1 (MQ=255) aGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATatg < 2:1598145/140‑1 (MQ=255) aGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATatg > 1:1791560/1‑140 (MQ=255) ccGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATatgat < 2:2121112/140‑1 (MQ=255) cGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATatgatg < 1:2321366/140‑1 (MQ=255) cGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATatgatg < 2:2441396/140‑1 (MQ=255) cGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATatgatg < 1:2882793/140‑1 (MQ=255) cGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATatgatg < 2:3512721/140‑1 (MQ=255) cGTTGGGAGAACCTTAAAGAACCTCGTTCTTCCAGCTTATTTGAAAACTTGAATGCGGTTGATACATGCATGACCCCGAAGGTCCCGATCTCAGAAATGGAAGCTCCATTCAATGGATACGCAATCCATAAAATatgatg < 1:2731403/140‑1 (MQ=255) tttGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCt < 1:699211/140‑1 (MQ=255) tttGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCt < 2:1205102/140‑1 (MQ=255) tttGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCt < 2:2520077/140‑1 (MQ=255) tttGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCt < 1:1721074/140‑1 (MQ=255) tGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCa > 2:4182937/1‑140 (MQ=255) ggAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCAt < 1:2474127/140‑1 (MQ=255) gagaACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCAtt < 2:3115874/140‑1 (MQ=255) agaACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTa < 1:2561452/140‑1 (MQ=255) agaACCTTAAATATCCTCGTTCTTCCAGCTTTTGTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTa < 2:3273059/140‑1 (MQ=255) agaACCTTAAATATCCTCGGTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTa < 1:1853963/140‑1 (MQ=255) agaACATTAAATAACCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTAGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTa < 2:3870326/140‑1 (MQ=255) ttAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTc < 1:1146335/140‑1 (MQ=255) ccTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCt < 1:1003756/121‑1 (MQ=255) ccTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATa < 2:932897/140‑1 (MQ=255) ccTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATa < 1:1450984/140‑1 (MQ=255) ccTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATa > 1:3236707/1‑140 (MQ=255) ccTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATa < 2:1517741/140‑1 (MQ=255) ccTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATa < 2:1345070/140‑1 (MQ=255) ccTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATa < 1:4037323/140‑1 (MQ=255) cccGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACGTGCATGACCCCGAATTTCGCGATTTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATaaa < 1:1399023/108‑1 (MQ=255) cccGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACGTGCATGACCCCGAATTTCGCGATTTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATaaa < 1:3016042/108‑1 (MQ=255) cccGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACGTGCATGACCCCGAATTTCGCGATTTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATaaa > 2:1399023/3‑110 (MQ=255) cccGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACGTGCATGACCCCGAATTTCGCGATTTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATaaa > 2:33479/3‑110 (MQ=255) cccGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACGTGCATGACCCCGAATTTCGCGATTTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATaaa > 2:3016042/3‑110 (MQ=255) cccGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACGTGCATGACCCCGAATTTCGCGATTTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATaaa < 1:33479/108‑1 (MQ=255) cTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCAtt < 1:2749571/88‑1 (MQ=255) cTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCAtt > 2:2749571/1‑88 (MQ=255) cTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATAc > 1:1065712/1‑140 (MQ=255) cTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAACCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATAc > 2:2074473/1‑140 (MQ=255) gTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATACGGt < 2:233812/140‑1 (MQ=255) tcCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTc < 1:152982/123‑1 (MQ=255) tcCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATACGGTTTGAg > 2:1323868/1‑140 (MQ=255) cagctttttGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATACGGTTTGAGCCa < 1:1599242/136‑1 (MQ=255) aGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATACGGTTTGAGCCa < 1:3773182/140‑1 (MQ=255) cTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATACGGTTTGAGCCAct < 2:1167397/140‑1 (MQ=255) cTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATACGGTTTGAGCCAct < 2:1791560/140‑1 (MQ=255) cTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATACGGTTTGAGCCAct < 1:2344998/140‑1 (MQ=255) cTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATACGGTTTGAGCCAct < 1:3115732/140‑1 (MQ=255) cTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATCATGCTCATTAATATTCAGATCATACGGTTTGAGCCAct < 1:2063220/140‑1 (MQ=255) cTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGAGACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATACGGTTTGAGCCAct < 2:1738031/140‑1 (MQ=255) gAATGCGGTTGATACGTGCATGACCCCGAATTTCGCGATTTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGGTCATACGGTTTGAGCCATTGCTGCCAATCCTtct < 2:467765/140‑1 (MQ=255) gAATGCGGTTGATACGTGCATGACCCCGAATTTCGCGATTTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGGTCATACGGTTTGAGCCATTGCTGCCAATCCTtct < 2:3407381/140‑1 (MQ=255) gAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATACGGTTTGAGCCACTGCTGCCAATCCTtct < 1:1812375/140‑1 (MQ=255) cGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATACGGTTTGAGCCACTGCTGCCAATCCTTCtcgatc < 2:1527119/140‑1 (MQ=255) ttGAGACATGCATGACCCCGACTTTAGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATACGGTTTGAGCCACTGCTGCCAATCCTTCTcgatcgat < 2:556056/140‑1 (MQ=255) atgcatgACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATACGGTTTGAGCCACTGCTGCCAATCCTTCTCGATCGATTTCCaaa < 2:2139159/140‑1 (MQ=255) atgcatgACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATACGGTTTGAGCCACTGCTGCCAATCCTTCTCGATCGATTTCCaaa < 1:1585288/140‑1 (MQ=255) | CTCAAGCAAGCTCCAGAATACCTCAGTGCCTTCCTCAGTCAATTGGACGTATGTGTTCCGTTTATCATTCAGCCGTTTGGAGAACCTTAAATATCCTCGTTCTTCCAGCTTTTTTGAAAAGTTGAATGCGGTTGATACATGCATGACCCCGAATTTCGCGATCTCAGAAATGGAAGCTCCATTCAATTGATACGCAATCCATAAAATATGATGCTCATTAATATTCAGATCATACGGTTTGAGCCACTGCTGCCAATCCTTCTCGATCGATTTCCAAA > NZ_CP034943/1046021‑1046298 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |