Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NZ_CP034943 1,112,969 C→T 100% L1022F (CTT→TTT)  addB → helicase‑exonuclease AddAB subunit AddB

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349431,112,9690CT100.0% 898.8 / ‑6.6 266L1022F (CTT→TTT) addBhelicase‑exonuclease AddAB subunit AddB
Reads supporting (aligned to +/- strand):  ref base C (1/1);  major base T (163/97);  minor base A (1/2);  total (166/100)
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 266 total aligned reads displayed.

TACGGACTGGCGCTGCAAATGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGCTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACGGTCAAATATCATCAATGCGGGCTT  >  NZ_CP034943/1112831‑1113105
                                                                                                                                          |                                                                                                                                        
  cGGACTGGCGCTGCAAATGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTg                                                                                                                                       >  2:91437/1‑140 (MQ=255)
  cGGACTGGCGCTGCAAATGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTg                                                                                                                                       >  1:1822659/1‑140 (MQ=255)
     aCTGGCGCTGCAAATGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGc                                                                                                                                    >  1:1672142/1‑140 (MQ=255)
     aCTGGCGCTGCAAATGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGc                                                                                                                                    >  1:3577439/1‑140 (MQ=255)
       tGGCGCTGCAAATGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCtt                                                                                                                                  >  1:1344477/1‑140 (MQ=255)
       tGGCGCTGCAAATGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCtt                                                                                                                                  >  1:282635/1‑140 (MQ=255)
       tGGCGCTGCAAATGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCAGTTTGGGAtt                                                                                                                                  >  2:27268/1‑140 (MQ=255)
         gcgcTGCAAATGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGa                                                                                                                                >  1:3932639/1‑140 (MQ=255)
         gcgcTGCAAATGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGa                                                                                                                                >  1:2770699/1‑140 (MQ=255)
         gcgcTGCAAATGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGa                                                                                                                                >  1:2382235/1‑140 (MQ=255)
          cgcTGCAAATGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATTAGGGCGACGCCGGCAGGAGTCCTGTATTTCCATAAACATGACCCGATGATTCAATATAATCTACCGTTTGGGCTTGAc                                                                                                                               >  2:2611254/1‑140 (MQ=255)
          cgcTGCAAATGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGAc                                                                                                                               >  2:1283092/1‑140 (MQ=255)
          cgcTGCAAATGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGAc                                                                                                                               >  1:2886003/1‑140 (MQ=255)
               cAAATGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGAt                                                                                                                          >  1:1278804/1‑140 (MQ=255)
               cAAATGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGAt                                                                                                                          >  1:2003337/1‑140 (MQ=255)
                   tGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGaa                                                                                                                      <  1:329398/140‑1 (MQ=255)
                   tGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGaa                                                                                                                      <  1:91437/140‑1 (MQ=255)
                       gACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAgg                                                                                                                  >  1:632658/1‑140 (MQ=255)
                       gACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAgg                                                                                                                  >  1:2994592/1‑140 (MQ=255)
                        aCGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGga                                                                                                                 <  1:1077943/140‑1 (MQ=255)
                         cGTACCTTGATTTATCGATTACTCATTCAGACGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGATTGGGCTTGACGAGATTGAACAGgag                                                                                                                >  1:4226337/1‑140 (MQ=255)
                              cTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCtt                                                                                                           >  1:1606691/1‑140 (MQ=255)
                                  aTTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAg                                                                                                       <  2:2638240/140‑1 (MQ=255)
                                       tCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAAtt                                                                                                  >  1:547809/1‑140 (MQ=255)
                                            tACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGTAGATCTTTAAGAAATTTaaaa                                                                                             >  2:597931/1‑140 (MQ=255)
                                            tACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAAAAGGAGATCTTTAAGAAATTTaaaa                                                                                             >  2:474947/1‑140 (MQ=255)
                                               tccttCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGATTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGa                                                                                          <  1:508502/137‑1 (MQ=255)
                                               tCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTTACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGa                                                                                          <  1:2088299/140‑1 (MQ=255)
                                               tCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGa                                                                                          <  1:221159/140‑1 (MQ=255)
                                               tCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGa                                                                                          <  2:2521012/140‑1 (MQ=255)
                                               tCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGa                                                                                          <  1:1564531/140‑1 (MQ=255)
                                                 aTTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACGGGAGATCTTTAAGAAATTTAAAATGAAg                                                                                        >  1:4145262/1‑140 (MQ=255)
                                                 aTTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAg                                                                                        >  1:1914774/1‑140 (MQ=255)
                                                 aTTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAg                                                                                        >  1:1351026/1‑140 (MQ=255)
                                                   tCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAggg                                                                                      >  1:3188075/1‑140 (MQ=255)
                                                   tCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAAACTAATCTCCCGTTTGGGCTTGACGAGATTCAAAAGGAGATCTTTAAGAAATATAAAATGAAgtg                                                                                      >  2:4198021/1‑138 (MQ=255)
                                                     aGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCt                                                                                    <  2:1377752/140‑1 (MQ=255)
                                                       ccGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTg                                                                                  <  2:648/140‑1 (MQ=255)
                                                       ccGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTg                                                                                  <  2:3239274/140‑1 (MQ=255)
                                                               cTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCgg                                                                          <  2:3505539/140‑1 (MQ=255)
                                                                tCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGc                                                                         <  2:3095643/140‑1 (MQ=255)
                                                                 cGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGTGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCg                                                                        >  2:761001/1‑140 (MQ=255)
                                                                 cGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTCGTCTAGACCAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAAGGCTTGCTCCACGGCg                                                                        >  2:3476381/1‑140 (MQ=255)
                                                                        aGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGa                                                                 >  2:2815075/1‑140 (MQ=255)
                                                                         gggCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGaa                                                                <  2:12445/140‑1 (MQ=255)
                                                                          ggCGACGCCGGCAGGAGTGCTGTATTTCCATAGACATGACCCGATGATACAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGATATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAg                                                               <  2:2446856/140‑1 (MQ=255)
                                                                              aCGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGt                                                           >  1:3153682/1‑140 (MQ=255)
                                                                              aCGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGt                                                           >  2:3863190/1‑140 (MQ=255)
                                                                                   ggCAGGAGTTGTGTATTTCGATATTTATGACGCGATGATTGAATATAATCTCCCGTTTTTGCTAGTATAGATTGAATATGAGATCTTTAAGAAATTTAATATGAAGGGCTTGCTCCTCGTGGATCAGGATGAGGTTCGca                                                      <  2:3864282/140‑2 (MQ=255)
                                                                                    gCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGATATCTTTAAGAAATTTAAAATCAATGTCTTGCTCCTCGGCGATCAGGAAGCGGTTCggat                                                     >  1:2439905/1‑137 (MQ=255)
                                                                                     cAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCtt                                                    <  1:290888/140‑1 (MQ=255)
                                                                                     cAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCtt                                                    <  1:997844/140‑1 (MQ=255)
                                                                                      atgAGTGCTGTATTTCAATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTa                                                   <  2:2794920/138‑1 (MQ=255)
                                                                                          gTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGa                                               <  2:772817/140‑1 (MQ=255)
                                                                                             cTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCTTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATAc                                            <  2:3290764/140‑1 (MQ=255)
                                                                                                tATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGAc                                         <  2:2897290/140‑1 (MQ=255)
                                                                                                 aTTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGAcc                                        <  2:4139152/140‑1 (MQ=255)
                                                                                                  tttCCATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGAccc                                       <  2:1822659/140‑1 (MQ=255)
                                                                                                     ccATATACATGACCCGATGATTCAATCTAATCTCCCGTTTTGGCTTGACGAGATTGAACAGGATATCTTTAAGAAATTTAAAATGAACGGATTCCTCCTCGGCGATCAGGAAGAGTTTCGCCTAATGTATACGAAACTTc                                    >  2:547489/1‑140 (MQ=255)
                                                                                                     ccATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTc                                    >  1:2637126/1‑140 (MQ=255)
                                                                                                     ccATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTc                                    >  1:3568027/1‑140 (MQ=255)
                                                                                                     ccATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTc                                    <  2:4299003/140‑1 (MQ=255)
                                                                                                     ccATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTc                                    >  1:3534945/1‑140 (MQ=255)
                                                                                                     ccATATACATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGAGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTc                                    >  1:2613220/1‑140 (MQ=255)
                                                                                                        tataCATGACCCGATGATTCAATCTAATCTCACGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGATAGATCCTCGGCGATCAGGAAGCGGATCGCCATATAGATACGACCATTCaaa                                 >  2:2400856/1‑139 (MQ=255)
                                                                                                          taCATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTATAAGAAATTTAAAAAGAAGGGAATGCTCCTCGGCGATCAGGAATCGGTTAGACTTATGTAAACGAACCTTCAagag                               >  2:3331378/1‑140 (MQ=255)
                                                                                                          taCATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCATTAAGAAATTTAAAATGAAGAGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTAATGGATACGACCCTTCAagag                               >  2:3376944/1‑140 (MQ=255)
                                                                                                            cATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGtt                                                          <  2:3404123/111‑1 (MQ=255)
                                                                                                            cATGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGtt                                                          >  1:3403311/1‑111 (MQ=255)
                                                                                                             aTGACCCGATGATTCACTCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGa                            <  1:796211/140‑1 (MQ=255)
                                                                                                             aTGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGa                            <  1:2232649/140‑1 (MQ=255)
                                                                                                             aTGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGa                            <  2:267387/140‑1 (MQ=255)
                                                                                                             aTGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGa                            <  1:3863190/140‑1 (MQ=255)
                                                                                                             aTGACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGa                            <  1:3488034/140‑1 (MQ=255)
                                                                                                               gACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACg                          >  1:4074822/1‑140 (MQ=255)
                                                                                                               gACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACg                          >  1:2464938/1‑140 (MQ=255)
                                                                                                               gACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACg                          >  2:1604344/1‑140 (MQ=255)
                                                                                                               gACCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGAACCTTCAAGAGGGACg                          >  2:1659253/1‑140 (MQ=255)
                                                                                                                aCCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGCTTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACgg                         >  1:753221/1‑140 (MQ=255)
                                                                                                                aCCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACgg                         >  1:2557048/1‑140 (MQ=255)
                                                                                                                aCCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACgg                         >  1:3643147/1‑140 (MQ=255)
                                                                                                                aCCCGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACgg                         >  1:2688344/1‑140 (MQ=255)
                                                                                                                 cccGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGAccc                                       >  1:2116422/1‑125 (MQ=255)
                                                                                                                 cccGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGAccc                                       <  2:2116422/125‑1 (MQ=255)
                                                                                                                 cccGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACGGt                        <  1:4282942/140‑1 (MQ=255)
                                                                                                                  ccGATGATTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTGTAAGAAATTTAAAATGAAGTGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTAATGGATACGACCATTCAAGAGGGACTGta                       >  2:3083378/1‑139 (MQ=255)
                                                                                                                    gatgatTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGTGCTTGCTCCTCGGCGATCAGGAAGCGGTACGCCGTATGGATACCACCATTCAAGAGGGACGGTCaa                     >  1:138879/1‑140 (MQ=255)
                                                                                                                     atgatTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGa                                                                                          <  1:3820997/70‑1 (MQ=255)
                                                                                                                     atgatTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCtt                                                    >  1:694070/1‑108 (MQ=255)
                                                                                                                     atgatTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACGGTCaaa                    >  1:3045870/1‑140 (MQ=255)
                                                                                                                     atgatTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACGGTCaaa                    >  1:4244658/1‑140 (MQ=255)
                                                                                                                     atgatTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACGGTCaaa                    >  1:173000/1‑140 (MQ=255)
                                                                                                                     atgatTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAACAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGATCGCCTTATGGATAAGAACCTTCAAGAGGCACGGTCaaa                    >  2:3550233/1‑140 (MQ=255)
                                                                                                                      tgatTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACGGTCAAat                   <  2:2065317/140‑1 (MQ=255)
                                                                                                                       gatTCAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACGGTCAAata                  >  2:3393630/1‑140 (MQ=255)
                                                                                                                           cAATCTAATCTCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTAAAAGAGGGACGGTCAAATatcat              >  2:3301120/1‑140 (MQ=255)
                                                                                                                              tctaatctCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACCGACAAATATCATCaa           >  2:2294723/1‑140 (MQ=255)
                                                                                                                              tctaatctCCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGCTTCGCCTTATGGATAAGACACTTAAATAGGGACAGTCAAATATCATCaa           >  2:2218919/1‑140 (MQ=255)
                                                                                                                                   tctcCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACGGTCAAATATCATCAATGCgg      >  1:3843130/1‑140 (MQ=255)
                                                                                                                                     tcCCGTTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACGGTCAAATATCATCAATGCGGGc    <  2:2003337/140‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                        
TACGGACTGGCGCTGCAAATGCTGACGTACCTTGATTTATCGATTACTCATTCAGCCGACTGGCTCGGAATGAGGGCGACGCCGGCAGGAGTGCTGTATTTCCATATACATGACCCGATGATTCAATCTAATCTCCCGCTTGGGCTTGACGAGATTGAACAGGAGATCTTTAAGAAATTTAAAATGAAGGGCTTGCTCCTCGGCGATCAGGAAGCGGTTCGCCTTATGGATACGACCCTTCAAGAGGGACGGTCAAATATCATCAATGCGGGCTT  >  NZ_CP034943/1112831‑1113105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: