| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,450,016 | G→C | 5.1% | P59P (CCG→CCC) | ccpC → | transcriptional regulator CcpC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,450,016 | 0 | G | C | 5.1% | 610.1 / 16.4 | 185 | P59P (CCG→CCC) | ccpC | transcriptional regulator CcpC |
| Reads supporting (aligned to +/- strand): ref base G (94/81); new base C (4/5); total (99/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 198 total aligned reads displayed.
GAGGAGTTAAATATGAGAAAGGCGGCGGAACGACTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGCACACTGAAGCTTGCCGTCGCCTCCATAATCGGCCAGCATTGGC > NZ_CP034943/1449879‑1450155 | gaggagTTAAATATGAGAAAGGCGGCGGAACGACTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACgccggc > 1:1177000/1‑140 (MQ=255)gaggagTTAAATATGAGAAAGGCGGCGGAACGACTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACgccggc > 1:912223/1‑140 (MQ=255)gaggagTTAAATATGAGAAAGGCGGCGGAACGACTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACgccggc > 1:2208918/1‑140 (MQ=255) aggagTTAAATATGAGAAAGGCGGCGGAACGACTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACgccggcc > 1:2616957/1‑140 (MQ=255) ttACATATGAGAAAGGCGGCGGAACGACTTTTTGTATCTCAGCCGGCTTTATCTCATCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAACGGGTTAACGGTAACGCCGGCCGGTga < 2:2249937/140‑1 (MQ=255) ttAAATATGAGAAAGGCGGCGGAACGACTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTga < 2:350380/140‑1 (MQ=255) aaaTATGAGAAAGGCGGCGGAACGACTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGATAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTgaga < 1:4272350/140‑1 (MQ=255) gagaAAGGCGGCGGAACGACTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAATAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGCCCGGTGAGAAAATCa > 2:1820465/1‑140 (MQ=255) gagaAAGGCGGCGGAACGACTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCa > 2:941052/1‑140 (MQ=255) gagaAAGGCGGCGGAACGACTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCa > 2:4249195/1‑140 (MQ=255) gagaAAGGCGGCGGAACGACTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCa < 2:1464127/140‑1 (MQ=255) gaAAGGCGGCGGAACGACTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCAtt > 2:986605/1‑140 (MQ=255) aGGCGGCAGAACGGCTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAATGGCGTGGGGAACAAAAATCTTTTTAAGATCGCAAAACGGATTAACGGTAACGCCCGCCGGGGAGACCATCATTCAg > 1:2759627/1‑140 (MQ=255) aGGCGGCAGAACGGCTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGTAACAAAAATCTTTTTAAGATCTCAAAAAGTATTAAAGGTAACGCCAGCCGGTGAGAAAATCATACAg > 1:850802/1‑140 (MQ=255) aGGCGGCAGAACGGCTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGAACAAAAATCTTTTTAAGATCTCAAAAAGGATTAACGGTAACGCCCGCCGGTGAGAAAATCATTCAg > 1:3126554/1‑140 (MQ=255) gcggAACGACTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGc > 2:1605479/1‑140 (MQ=255) ggAACGACTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTACCGCCGGCCGGTGAGAAAATCATTCAGTTTGCGa < 1:2959615/140‑1 (MQ=255) aCTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAatgatg > 1:2044620/1‑140 (MQ=255) cTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGAtgt < 1:2132553/140‑1 (MQ=255) cTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGAtgt < 2:377858/140‑1 (MQ=255) cTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGAtgt < 1:652806/140‑1 (MQ=255) cTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACACCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGAtgt < 1:2460433/140‑1 (MQ=255) ttttGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGAtgt < 1:3698186/138‑1 (MQ=255) ttttGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGAtgt > 2:3698186/1‑138 (MQ=255) tGTATCTCAGCCGGATTTATCTCAGAGCGTACAAACCATGGAAAAGGCGTCGGGCACAAGAATCTTTTCAAGATCCCACAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGt < 2:2533491/140‑1 (MQ=255) ctcAGCCGGCTTTATCTCAGCGCTTACACACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTagag < 1:2849281/140‑1 (MQ=255) ctcAGCCGGCTTTATCTCAGCGCTTACAACCCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTagag < 1:1813313/140‑1 (MQ=255) ctcAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACTGTAACGCCGGCCGGTGAGAAAATCATTAAGTTTGCGAATTATGTGACGGTagag > 1:2680852/1‑140 (MQ=255) ctcAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTagag < 1:1345643/140‑1 (MQ=255) ccGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGAtgt < 2:887636/125‑1 (MQ=255) ccGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGAtgt > 1:887636/1‑125 (MQ=255) ccGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGa < 1:2297831/140‑1 (MQ=255) ccGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGa < 1:1562541/140‑1 (MQ=255) ttATCTCAGCGCTTACACACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAAt < 1:3878620/140‑1 (MQ=255) aTCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATaa > 2:3818197/1‑140 (MQ=255) ctcAGCGCTTACAAACCATCGAAAACGCGTGGGTAACTAAATTCTTTTTTAGATCCCATAAATTGTTAAGGGTATTGGCGGGCTGTGTGATATTATTACATTTTTCTAATTTTTTTATGCTAGAGCAGGAAAGAATAaga < 2:2057217/140‑1 (MQ=255) ctcAGCGATTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAaga < 2:2382408/140‑1 (MQ=255) ccccgcccTTACACACCACCGCAAAGGCGTCGGGTAAAAAACTCTTTTGAACATCCCATAACTTGATATCGGTATCCCTGGCCTGTGTGAAAATAATTAAGTTTGCGAATGATGTTACGATAGAGCAGGAAAGAATAaga < 2:2192396/133‑1 (MQ=255) cAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAgaga < 1:264236/140‑1 (MQ=255) aGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGAtgtg < 1:3793840/113‑1 (MQ=255) gcgcTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGaaa > 1:4121881/1‑140 (MQ=255) cgcTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGa > 2:2486692/1‑103 (MQ=255) cgcTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGa > 2:923532/1‑103 (MQ=255) cgcTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGa < 1:916265/103‑1 (MQ=255) tACAAACCATTGACAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATAtt > 2:3537070/1‑140 (MQ=255) tACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCCGGAAAGAATAAGAGAAACTAtt > 1:3656523/1‑140 (MQ=255) tACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAAAGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATAtt > 1:433894/1‑140 (MQ=255) aCAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATtg > 1:1218416/1‑140 (MQ=255) aCAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATtg > 1:1971648/1‑140 (MQ=255) aaaaCATTTAAAAGGAGTGGGTCACAAAAATCTTTTTAAGATCCCAAAAAGTGTTAACGGTAACTCAGTCCGGTTATAAAATCATTAAGTTTTCGAATTATGTGACGTTTGAGTATTAAAGAATTAGAGTAAATATtgat < 2:2427650/140‑1 (MQ=255) aaaCCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATtgat < 1:171965/140‑1 (MQ=255) aaaCCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATtgat < 1:2613783/140‑1 (MQ=255) ttcaaaaGGCGTGGGCCAAAAAAATAATATAAAGATCACAAAAACGGTTAAAGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCtt > 2:1071058/4‑140 (MQ=255) ttGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAATGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCtt < 2:823306/140‑1 (MQ=255) ttGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGACAGAATAAGAGAAAATATTGATGAGCtt > 1:3193301/1‑140 (MQ=255) ttGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGACAATATTGATGAGCtt > 1:1270012/1‑140 (MQ=255) ttGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCtt > 1:962633/1‑140 (MQ=255) ttGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCtt > 1:2305285/1‑140 (MQ=255) ttGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCtt > 2:2972818/1‑140 (MQ=255) ttGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCtt > 1:2078264/1‑140 (MQ=255) ttGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCtt > 1:3889282/1‑140 (MQ=255) ttGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCtt > 2:741882/1‑140 (MQ=255) ttGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCtt > 1:1182652/1‑140 (MQ=255) ttGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATGGATGAGCtt < 2:2620358/140‑1 (MQ=255) gataaGGCGCGGGCCACAAAAATCTTTTAAAGATCCCAAAAACGGTTAACGGTCACGCCGGCCGGTGAGAAAATCCTTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAACTATTGATGAGCTTGa < 2:4032424/137‑1 (MQ=255) aaaaGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTACCGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCCGGAAAGAATAAGAGAAAATATTGATGAGCTTGaa > 2:1414038/1‑140 (MQ=255) ggCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTg < 2:189388/140‑1 (MQ=255) gCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGCTGAGCTTGAAGGTGa > 1:3565359/1‑140 (MQ=255) gCGTGGGGCACAAAAATCTTTTGAAGATCCCAACAAGGGTTCACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGACTGCTGTGACGTTAGAGCAGGACAGACGAAGAGCAAATATTGATGAGCTTGAAGGTGa > 2:1734468/1‑140 (MQ=255) tGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGaa > 1:2282058/1‑80 (MQ=255) gggCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTc > 2:609337/1‑140 (MQ=255) ggCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCa < 2:2044620/140‑1 (MQ=255) ggCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCa < 2:3777152/140‑1 (MQ=255) cacaAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACg < 1:3339373/140‑1 (MQ=255) acaAAAATCTTTTTAAGATCCCAAACAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACgg < 1:3851287/140‑1 (MQ=255) caAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGACAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGc > 2:2553881/1‑140 (MQ=255) caAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGACAATATTGATGAGCTTGAAGGTGAAATTCACGGc > 2:584163/1‑140 (MQ=255) caAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGc > 2:2326320/1‑140 (MQ=255) aaaaaTCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGca < 2:341756/140‑1 (MQ=255) aaaaaTCTTTTTAAGATCCCAAAAAGGGTTAACGCTACCGCCGGCCGGTGAGAAAATCCTTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAACTATTGATGAGCTTGAAGGTGAAATTCACGGca < 2:3980061/140‑1 (MQ=255) aTCTTTTTAAGATCCCAAACAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAACATATTGATGAGCTTGAAGGTGAAATTCACGGCACACt < 1:569606/140‑1 (MQ=255) aTCTTTTTAAGATCCCAAACAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGCACACt < 1:2487745/140‑1 (MQ=255) aTCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGCACACt < 1:932916/140‑1 (MQ=255) ttttAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGCACACTGAAg > 2:3247047/1‑140 (MQ=255) cccAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGCACACTGAAGCTTGCCGTc > 1:76596/1‑140 (MQ=255) cccAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTGTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGCACACTGAAGCTTGCCGTc < 2:3582431/140‑1 (MQ=255) attAACGGTAACGCCCGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACATTAGAGCAGGAAAGAATAAGAGAAAATATTGACGAGCTTGAAGGTGAAATTCACGGCACATTGAAGCTTGCCGTCGCCTCCATaa < 2:3126554/139‑1 (MQ=255) attAACGGTAACGCCCGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACATTAGAGCAGGAAAGAATAAGAGAAAATATTGACGAGCTTGAAGGTGAAATTCACGGCACATTGAAGCTTGCCGTCGCCTCCATaa < 2:4331607/139‑1 (MQ=255) attAACGGTAACGCCCGCCGGTGAGAAAATCATTCAGTGTGCGAATGATGTGACATTAGAGCAGGAAAGAATAAGAGAAAATATTGACGAGCTTGAAGGTGAAATTCACGGCACATTGAAGCTTGCCGTCGCCTCCATaa < 2:2759627/139‑1 (MQ=255) aaCGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGCACACTGAAGCTTGCCGTCGCCTCCATAATCg > 2:2758415/1‑140 (MQ=255) aaCGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGCACACTGAAGCTTGCCGTCGACTCCATAATCg > 1:4091930/1‑140 (MQ=255) aCGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATTTTGATGAGCTTGAAGGTGAAATTCACGGCACACTGAAGCTTGCCGTCGCCTCCATAATCgg < 1:3967960/140‑1 (MQ=255) aCGGTAACGCCGGCCGGTGAGAAAATCAGTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGCACACTGAAGCTTGCCGTCGCCTCCATAATCgg < 1:3406446/140‑1 (MQ=255) cGGTAACGCCGGCCGGTGAGAAAATCATTCTGTTTGCGAATGAGGTGACGTTAGAGCAGGAAAGAATAAGAGAAAAGATTGATGAGCTTGAAGGTGACATTCACGGCACACTGAAGCTTGCCGTCGCCTCCATAATCGGc < 1:2183316/140‑1 (MQ=255) cGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGCACACTGAAGCTTGCCGTCGCCTCCATAATCGGc < 1:609337/140‑1 (MQ=255) aaCGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGCACACTGAAGCTTGCCGTCGCCTCCATAATCGGCCAGc > 1:554118/1‑140 (MQ=255) aaCGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGCACACTGAAGCTTGCCGTCGCCTCCATAATCGGCCAGc > 2:833820/1‑140 (MQ=255) aaCGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGCACACTGAAGCTTGCCGTCGCCTCCATAATCGGCCAGc > 2:334337/1‑140 (MQ=255) cGCCGGCCGTATATAAAATCATTCAGTTTTCGAATTATTTGACGTTAGAGCAGTAAAGAATAAGAGAAAATATTTATGAGCTTGAAGGTTAAATTCACGGCACACTGAAGCTTGCCGTCGCCTCCATAATCGGCCAGCAt < 1:3402344/140‑1 (MQ=255) cggccggTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGCACACTGAAGCTTGCCGTCGCCTCCATAATCGGCCAGCATTgg < 1:1427435/140‑1 (MQ=255) | GAGGAGTTAAATATGAGAAAGGCGGCGGAACGACTTTTTGTATCTCAGCCGGCTTTATCTCAGCGCTTACAAACCATTGAAAAGGCGTGGGGCACAAAAATCTTTTTAAGATCCCAAAAAGGGTTAACGGTAACGCCGGCCGGTGAGAAAATCATTCAGTTTGCGAATGATGTGACGTTAGAGCAGGAAAGAATAAGAGAAAATATTGATGAGCTTGAAGGTGAAATTCACGGCACACTGAAGCTTGCCGTCGCCTCCATAATCGGCCAGCATTGGC > NZ_CP034943/1449879‑1450155 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |