| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,512,543 | G→T | 5.9% | intergenic (‑71/‑42) | EO946_RS07905 ← / → typA | YlaF family protein/translational GTPase TypA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,512,543 | 0 | G | T | 5.9% | 503.0 / 4.7 | 168 | intergenic (‑71/‑42) | EO946_RS07905/typA | YlaF family protein/translational GTPase TypA |
| Reads supporting (aligned to +/- strand): ref base G (114/41); new base T (2/11); total (116/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.05e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 171 total aligned reads displayed.
CGATCAGCATAATACTGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGT > NZ_CP034943/1512406‑1512680 | cGATCAGCATAATACTGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGta < 2:1127735/140‑1 (MQ=255)cGATCAGCATAATACTGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGta < 2:4108239/140‑1 (MQ=255) gATCAGCATAATACTGAAAACCTCTGCAAATGCAAATAATAGTACAAGCCAATTCATTTATGTCATATTTTCCATCCCCTTTTACGTCTTATCATCACTTTACAGAAAAACGTGACGCTTGTAAAGAGGATGTTTGGtat > 1:4045045/1‑140 (MQ=255) cATAATACTGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAAtgtg > 1:826756/1‑140 (MQ=255) cataCTGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCCTATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTAGAGACAAACGTGACGCTTTTAGAGCGGATGTGTGGTAGAATGTGaaa > 2:2523495/2‑140 (MQ=255) aataCTGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTTCGTCTTCTCCTAAGTTTACAGAAAAACGTGACGCTTTTAAAGTGGATGTGTGGTATACTGTGaaa > 1:3225290/1‑140 (MQ=255) aataCTGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAATTTTACAGAAAAACGTGACGATTTTAAAGAGGATGTGTGGTATAATGTGaaa > 1:1774731/1‑140 (MQ=255) taCTGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTGTTACGTCTTATCATAAGTTTACAGAAAATCGTGACGCTTTTAATGAGGATGTGTGGTATAATGTGAAAgg > 1:3456290/1‑139 (MQ=255) tGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTATACGTCGTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTAt > 2:3526186/1‑140 (MQ=255) gAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCACTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATc > 1:47234/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACATAAAAACGTGACGCTTTTAAAGAGTATGTGTGGTATAATGTGAAAGTTATCt > 1:4154865/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 2:2082328/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 2:2449923/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 1:3891023/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 2:4074316/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 1:4009252/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 2:3072515/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGAGGTGTGGTATCATGTGAAAGTTATCt > 1:1178680/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTGATCATACGTGTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCt > 1:2160280/1‑140 (MQ=255) aaaaCCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCAATCACCTTTTACGTCTTATCATAAGTTTACAGAAAAAATTGACGCTTGTAAAGAGGATGTGTGTTATAATTTGAAAGTTATCt > 1:1109855/1‑140 (MQ=255) cGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTCTAATGTGAAAGTTATCTAAttt > 1:902123/1‑140 (MQ=255) cTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTCTAATGTGAAAGTTATCTAATTtta > 2:2133627/1‑140 (MQ=255) cTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTtta > 2:1604864/1‑140 (MQ=255) aataatAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGa < 1:3097170/140‑1 (MQ=255) tAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGa > 1:4278545/1‑140 (MQ=255) tAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGa > 1:2903007/1‑140 (MQ=255) tAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGa > 1:77245/1‑140 (MQ=255) aaGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGaaag > 1:2573593/1‑139 (MQ=255) aaGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAAc > 1:466245/1‑140 (MQ=255) gCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTCTAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACtt > 2:4126815/1‑140 (MQ=255) gCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACtt > 2:583655/1‑140 (MQ=255) gCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACtt > 2:3402147/1‑140 (MQ=255) ttCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAATAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGaaa > 2:1673594/1‑140 (MQ=255) ttCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATTTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGaaa > 2:1295445/1‑140 (MQ=255) ttCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGaaa > 1:4321376/1‑140 (MQ=255) cATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTTTGGTATAATTTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATg < 2:3397919/140‑1 (MQ=255) cATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATg < 1:169838/140‑1 (MQ=255) cATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATg < 2:104399/140‑1 (MQ=255) cATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATg < 1:1345218/140‑1 (MQ=255) cATTTTTTTCATATTTTCCATCCCCTTTTACGTATTATATTAAGTTTACAGTATAACGTTACTCTTTTAAAGAGGATTTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATg < 2:3178733/140‑1 (MQ=255) tttttttCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGAt < 1:1830106/140‑1 (MQ=255) tttttttCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGAt < 1:987352/140‑1 (MQ=255) cttttttCATATTTTCCCTCCCCAATAACCACTGATCATAAGTTTACACAAAAACGTGACGCTGTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGAt < 1:4304127/139‑1 (MQ=255) ttttttCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAATTGAAACTTCGAAATGATc > 2:2420634/1‑140 (MQ=255) cATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTAAAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCa < 1:3839265/140‑1 (MQ=255) ttttCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACag < 2:497669/140‑2 (MQ=255) ttttCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACAt < 2:1818498/140‑1 (MQ=255) ttttCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACAt < 2:902123/140‑1 (MQ=255) aTCACCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGat < 2:26808/140‑1 (MQ=255) tCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGatt < 1:25681/140‑1 (MQ=255) cTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTg < 1:1508914/140‑1 (MQ=255) ttttACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGc < 2:1735587/140‑1 (MQ=255) ttttACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGc < 1:407118/140‑1 (MQ=255) tttACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGcc < 2:3891023/140‑1 (MQ=255) tttACGTATTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGATGATTTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGcc < 2:2011368/140‑1 (MQ=255) cGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACg < 1:1964096/140‑1 (MQ=255) tCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGtt > 1:485345/1‑140 (MQ=255) cTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTg > 1:1070222/1‑140 (MQ=255) ttATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGa > 2:859521/1‑140 (MQ=255) ttATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGa > 2:373265/1‑140 (MQ=255) ttATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGa > 1:4020725/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 1:2558383/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 1:1853478/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGAc > 1:1538574/1‑140 (MQ=255) tATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACATCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGATGAc > 1:30771/1‑140 (MQ=255) cATAAGTTTACATAAAAACGTGACTCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCAt < 2:4025774/140‑1 (MQ=255) cATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCAt < 2:817999/140‑1 (MQ=255) aGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAAGTTTATTAGGAGATGAAAAAGGGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACGCTGGGa > 1:2621107/1‑140 (MQ=255) aGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTAACTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATTATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGa > 1:2216692/1‑140 (MQ=255) tACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAAc > 1:3033891/1‑140 (MQ=255) tACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAAc > 1:965518/1‑140 (MQ=255) aCAGAAAAACGTGACGCTTTTAAAGAGGATGGGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACg > 1:2136500/1‑140 (MQ=255) aaaaCGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGattat > 1:1265795/1‑110 (MQ=255) aaaaCGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGattat < 2:1265795/110‑1 (MQ=255) aaaaCGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGattat > 1:2825232/1‑110 (MQ=255) aaaaCGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGattat < 2:2825232/110‑1 (MQ=255) aaaCGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTa > 1:1215162/1‑140 (MQ=255) aaaCGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGGTGACCATGGGAAAACGACTCTa > 1:4302629/1‑140 (MQ=255) aaCGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAg > 1:1409964/1‑140 (MQ=255) tctattttAAAGAGTTTGTGTGTGATATTGTTAAATTTATCTAATTTGATTTGGAGTTTAAAATGTCAAACTTCGAATTGATCTTCGCAACAGCGCGTTTTGGGCCAACGTTGACCATGGGAAAACGACTCTAGTCGATc < 2:3973919/136‑1 (MQ=255) acttttttAATTAGGTTGTTTGTTATATTTTTAATGTTATCTTTTTTTATTTGTATATTAAAAAGTTAAACTTGTAAATGATTTTCCCAACACCGCTTTTTTTGCCCAGGTGGACCATGGGAAAACGACTCTAGTCGATc < 2:2900037/136‑1 (MQ=255) aCGCTTTTAAAGAGGAGGTGTGTTTTACTGTGAATTTTATCTAATTTTATTAGGAGATTAAAAAGTTAAACTTCTAAATCATCTACGCAACATCGCTATTATTGCCCACGTTCACCTTGGTAACACGACTCTAGTCGATc < 1:696730/140‑1 (MQ=255) cGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCa > 1:626863/1‑140 (MQ=255) cGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCa > 1:3282400/1‑140 (MQ=255) cGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCa > 1:4160729/1‑140 (MQ=255) gtgtttgtttgttATATTGTTAAATTTATCTATTTTTATTAGGATATTAAAAAGTTAAATTTCGAAATGATATTCGCAACATCGCTTTTTTTGCCCACTTTGACCTGGGCAACACGACTCTAGTCGATCAGCTTTTacac < 1:557884/135‑1 (MQ=255) gtgttggtgtgtTATATTTTGAATGTAATATAATTTTATTAGGTGATTAAAAATTTAAACTTCTAAATGATCTTCGCAACATCGCTTTTATTGCCCCCGTGGACCATGGCAAAACGACTCTAGTCGATCAGCTTTTacac < 2:826756/134‑1 (MQ=255) gcggATGTGTGTTATTATGTCAATGTTATCTAATTTTATGACGAGATTAAAAAGTCAAACTTCTAATTGATCTTCGAACCAGCGCGTTTTTTCCCCCGGTGGACCATGCTAAAACGACTCTAGTCGATCAGCTTTTacac < 2:2926367/138‑1 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGAGTCTAGTCGATCAGCTTTTAcagcag > 1:3605066/1‑140 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTATTCTATCAGCTTTTACACCAg > 1:2075038/1‑140 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 1:4097099/1‑140 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 1:1091837/1‑140 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 1:1687212/1‑140 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 1:2993238/1‑140 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAg > 2:2745196/1‑140 (MQ=255) gATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATAAGCTTTTACACCAg > 1:438873/1‑140 (MQ=255) ttgtgttGTATAATTTTAAATTTATATAATTTTTTTAGTAGTTGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAgg < 2:4278545/139‑1 (MQ=255) ttgtgtgTTATATTGTTAATTTTATATATTTTTTTTAGGAGATTAAAAATTTAAACTTCTAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTCACCATGGTAAAACGACTCTAGTCGATCAGCTTTTACACCAgg < 2:77258/139‑1 (MQ=255) ttgtgtgTTATAATTTTAATTTTATCTATTTTTATTAGGAGATTAAAAAGTTAAAATTCGAATTGATCTTCCCAACATCGCTTTTTTTGCCCAGGTTGACCATGGTAAAACGACTCTAGTCGATCAGCTTTTACACCAgg < 1:787784/139‑1 (MQ=255) aTGTGTGTTTTAATGTTAAATTTATATATTTTTTTTAGGATTTGAAAATGTGAAACTTCGAATTGATGTTCGAAACATCGCTTTTTTTGCCCACTTTGACCTTGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAgg < 2:2178646/140‑1 (MQ=255) | CGATCAGCATAATACTGAAAACCGCTGCAAATGCAAATAATAGTAAAAGCCAATTCATTTTTTTCATATTTTCCATCCCCTTTTACGTCTTATCATAAGTTTACAGAAAAACGTGACGCTTTTAAAGAGGATGTGTGGTATAATGTGAAAGTTATCTAATTTTATTAGGAGATGAAAAAGTGAAACTTCGAAATGATCTTCGCAACATCGCGATTATTGCCCACGTTGACCATGGGAAAACGACTCTAGTCGATCAGCTTTTACACCAGGCTGGT > NZ_CP034943/1512406‑1512680 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |