| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 376,966 | A→C | 9.2% | K781T (AAA→ACA) | srfAA → | surfactin non‑ribosomal peptide synthetase SrfAA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 376,966 | 0 | A | C | 9.2% | 809.6 / 14.6 | 357 | K781T (AAA→ACA) | srfAA | surfactin non‑ribosomal peptide synthetase SrfAA |
| Reads supporting (aligned to +/- strand): ref base A (145/163); new base C (46/2); total (191/166) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.50e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 357 total aligned reads displayed.
GTTGAAGCTATTTAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGACGGCTGAG > NZ_CP034943/376829‑377102 | gAAGCTATTTAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAgcgc < 1:3077179/140‑1 (MQ=255) gAAGCTATTTAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAgcgc < 2:1024901/140‑1 (MQ=255) gAAGCTATTTAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAgcgc < 1:3348523/140‑1 (MQ=255) aGCTATTTAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTg < 1:314695/140‑1 (MQ=255) aGCTATTTAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTg < 2:1400563/140‑1 (MQ=255) aTTTAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCAGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATAAGCGTATGTGCCGATCGGGAAAGCGCTGGGGa > 2:328545/1‑140 (MQ=255) tttCAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGaa < 1:2195869/140‑1 (MQ=255) ttAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGact > 1:3538124/1‑138 (MQ=255) ttAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAAt > 1:1979840/1‑140 (MQ=255) ttAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAAt > 2:1349698/1‑140 (MQ=255) tAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATa < 2:695786/140‑1 (MQ=255) aaaGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATaa < 1:2122446/140‑1 (MQ=255) cAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAACGCGCTGGGGAATAACCGTTta > 2:4250549/1‑140 (MQ=255) cAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTta > 2:2937817/1‑140 (MQ=255) aGGCACATAGCAGCGTTTGACCAATTTGTACGGGCCGACTGAAACGTGTGTTGAAGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTAAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTtat < 1:434786/140‑1 (MQ=255) aGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTtat < 1:3762090/140‑1 (MQ=255) cgccgcGTTTGACCAATGTGTACGGGCCGACTGACACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGACAGCGCTGGGGAATAACCGTTTATATATTTTg > 2:3344249/1‑140 (MQ=255) cgccgcGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGACGAACCGTTTATATATTTTg > 1:3718366/1‑140 (MQ=255) cgccgcGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTg > 2:3322522/1‑140 (MQ=255) cgccgcGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTg > 2:434189/1‑140 (MQ=255) gccgcGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTgg < 2:3006284/140‑1 (MQ=255) ccgcGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCCTCAGTTTATCCCAGAGAGTGCCTTTCAATCAGCGTATGTGCCGATCGTGACAGCGCTGGGGAATCACCGTTTATATATTTGGGa > 1:2132969/1‑140 (MQ=255) ccgcGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGa > 1:3697062/1‑140 (MQ=255) cgTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGACAGCGCTGGGGACTAACCGTTTATATATTTTGGATCa > 1:1020245/1‑140 (MQ=255) gACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGACTAACCGTTTATATATTTTGGATCAAagag > 1:477377/1‑140 (MQ=255) gACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCACATAGAGTGCCGTTCAATCATCGTATGTGCAGATCTGGAACGCGCTGGGGAATAACCGTTTATATATTTTGTATCAAagag > 1:505594/1‑140 (MQ=255) aCCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCGGGGGAATAACCGTTTATATATTTTGGATCAAAGagg < 2:177092/140‑1 (MQ=255) aTGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAACGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGaggcagg > 2:526451/1‑140 (MQ=255) tgtACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTg < 1:1600610/140‑1 (MQ=255) gggCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGcc < 1:550327/140‑1 (MQ=255) gggCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGcc < 2:1550297/140‑1 (MQ=255) gggCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGcc < 1:1567331/140‑1 (MQ=255) gggCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTGATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGcc < 1:808685/140‑1 (MQ=255) gCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCgg > 1:2544606/1‑140 (MQ=255) gCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCgg > 1:3432238/1‑140 (MQ=255) gACTGACCCGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATCACCGGTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAg > 2:863883/1‑140 (MQ=255) gACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCCGCGGATGTGCCGATCGGGACAGCGCTGGGGAATAACCGTTTATATCTTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAg > 2:3632281/1‑140 (MQ=255) gACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGACAGCGCTGGGGAATAACCGTGTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAg > 2:1703650/1‑140 (MQ=255) gACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAg > 2:2408937/1‑140 (MQ=255) gtgtTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTggcgggc < 2:345898/140‑1 (MQ=255) gtgtTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTggcgggc < 1:2925094/140‑1 (MQ=255) gtgtTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTggcgggc < 2:249312/140‑1 (MQ=255) tgtTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTgtcgggcg > 1:1650154/1‑140 (MQ=255) ttGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAg < 1:2658872/140‑1 (MQ=255) ttGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAg < 1:3264408/140‑1 (MQ=255) aCGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGACAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCtt > 1:2166814/1‑140 (MQ=255) cGTTCATGAGCTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCg < 1:2812614/140‑1 (MQ=255) cGTTCATCAGGTTATCCCAGAGCGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTGTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCg < 2:1517891/140‑1 (MQ=255) cGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTggcgggc > 2:289760/1‑127 (MQ=255) cGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTggcgggc < 1:289760/127‑1 (MQ=255) ccggTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGa < 1:1366003/138‑1 (MQ=255) caGTTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGCTCGCGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCACAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGa < 2:266310/140‑1 (MQ=255) caGGTTATCCCAGAGCGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGTGACTAACCGTTTATATATGTTGGATCAAAGAGGCAGTCTGCAGCCGGAAGGTGTGCCGGGCGAGCTTTATATCGCAGGCGa < 1:2381480/140‑1 (MQ=255) caGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGa < 2:3489726/140‑1 (MQ=255) caGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGa < 1:1938729/140‑1 (MQ=255) caGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGa < 1:2408937/140‑1 (MQ=255) caGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGa < 1:3642983/140‑1 (MQ=255) caGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGa < 2:1143662/140‑1 (MQ=255) caGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGa < 2:4214012/140‑1 (MQ=255) caGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGa < 1:1141695/140‑1 (MQ=255) caGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGa < 1:3014565/140‑1 (MQ=255) caGGTGATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGa < 1:4257/140‑1 (MQ=255) aGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGAc < 1:3969141/140‑1 (MQ=255) aTCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAg > 2:4069091/1‑117 (MQ=255) aTCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAg < 1:4069091/117‑1 (MQ=255) cccAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGACCGCGCTGGGGACTAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTg > 2:1196135/1‑140 (MQ=255) gagagTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCg < 2:2132969/140‑1 (MQ=255) gagagTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCg < 2:1943993/140‑1 (MQ=255) agagTGCCGTTCAATCAGCGTATGTGCCGATCGGGACAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGa > 2:3215241/1‑140 (MQ=255) agagTGCCGTTCAATCAGCGTATGTGCCGATCGGGACAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGGGTTGGCCGa > 2:2212279/1‑140 (MQ=255) agagTGCCGTTCAATCAGCGTATGTGCCGATCGGGACAGCGCTGGGGAATAACCGGTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGa > 2:2772280/1‑140 (MQ=255) agagTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGa > 1:1836128/1‑140 (MQ=255) agTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAgg < 1:4116585/140‑1 (MQ=255) tGCCGTTCAATCAGCGTATGTGCCGATCGGGACAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCt > 2:616286/1‑140 (MQ=255) tGCCGTTCAATCAGCGTATGTGCCGATCGGGACAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCt > 2:3692574/1‑140 (MQ=255) tGCCGTTCAATCAGCGTATGTGCCGATCGGGAACGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCt > 2:4147111/1‑140 (MQ=255) tGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCt > 2:3666846/1‑140 (MQ=255) tGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCt > 1:1208759/1‑140 (MQ=255) tGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCt > 2:3761504/1‑140 (MQ=255) tGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCt > 1:3863157/1‑140 (MQ=255) tGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCt > 2:2992285/1‑140 (MQ=255) tGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGGTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCt > 2:1654111/1‑140 (MQ=255) gCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTggcgggc < 1:1677446/102‑1 (MQ=255) ccGTTCAATCAGCGTCGGTGCCGATCGGGACCGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTGATATCGCAGGCGACGGAGTTGGCCGAGGCTAt > 2:2062170/1‑140 (MQ=255) ttCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGa > 1:1864317/1‑85 (MQ=255) ttCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGa < 2:1864317/85‑1 (MQ=255) aaTCCGCGTATGTGGCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGTGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGGGTTGGCCGAGGCTATTTACAt > 2:1272625/1‑140 (MQ=255) aaTCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGa > 2:1059176/1‑115 (MQ=255) tCAGCGTATGTGCCGATCGGGACAGCGCTGGGGACTAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACAttt > 1:2993227/1‑140 (MQ=255) aGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGc < 1:4228079/140‑1 (MQ=255) aGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGc < 2:3984103/140‑1 (MQ=255) cGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCt < 2:227618/140‑1 (MQ=255) gtgCCGATCGGGAAAGCGCTGGGGACTACCCGTTTATATATTTTGGCTCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAAtt < 2:2821776/140‑1 (MQ=255) gCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGa < 1:4178386/140‑1 (MQ=255) gCCGATCGGCAAAGCGCGGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGa < 2:3397129/140‑1 (MQ=255) gATCGGGAACGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGACgg > 1:4322954/1‑140 (MQ=255) gATCGGGAACGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGACgg > 2:792020/1‑140 (MQ=255) gATCGGGAAAGCGCTGGGGACTAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGACgg > 1:2301162/1‑140 (MQ=255) gATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGACgg > 1:658305/1‑140 (MQ=255) ggAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGACGGCTgag < 1:1748357/140‑1 (MQ=255) | GTTGAAGCTATTTAAAGAAGCAGGCACAGCGCCGCGTTTGACCAATGTGTACGGGCCGACTGAAACGTGTGTTGACGCGTCCGTTCATCAGGTTATCCCAGAGAGTGCCGTTCAATCAGCGTATGTGCCGATCGGGAAAGCGCTGGGGAATAACCGTTTATATATTTTGGATCAAAGAGGCAGGCTGCAGCCGGAAGGTGTGGCGGGCGAGCTTTATATCGCAGGCGACGGTGTTGGCCGAGGCTATTTACATTTGCCTGAATTGACGGCTGAG > NZ_CP034943/376829‑377102 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |