| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,300,863 | T→G | 7.0% | intergenic (‑194/+202) | ribD ← / ← EO946_RS11710 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase RibD/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,300,863 | 0 | T | G | 7.0% | 600.5 / 8.9 | 254 | intergenic (‑194/+202) | ribD/EO946_RS11710 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase RibD/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (116/111); new base G (3/23); total (119/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.06e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 260 total aligned reads displayed.
AAAATCCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATTATAGCGATCCTTTTTAAAGTACGCA > NZ_CP034943/2300725‑2300999 | aaaTCCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTGATACAATTGCATAGCGGCAAATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTa > 2:4274785/1‑140 (MQ=255) aaTCCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTAt > 2:1395576/1‑140 (MQ=255) ggggCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGcaca < 1:928976/140‑1 (MQ=255) ggggCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGcaca < 1:79799/140‑1 (MQ=255) ggggCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGcaca < 2:3871175/140‑1 (MQ=255) ggggCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTAGGcaca < 2:2806411/140‑1 (MQ=255) ggggCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTGATGcaca < 2:3633044/140‑1 (MQ=255) ggggCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCGTATGcaca < 1:3838533/140‑1 (MQ=255) ggggCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTGTGATACAATTGCATAGCGGCACATCATCCGTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGcaca < 2:1220622/140‑1 (MQ=255) aGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCAc < 1:747885/140‑1 (MQ=255) aGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCAc < 1:178160/140‑1 (MQ=255) ggTATTTTACGCAATAGGAAATAACACTATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACg < 1:2040939/140‑1 (MQ=255) ggTATTTTACGCAATAGGAAATAACACTATGCATTTTTGATACAAGTGCATAGCGGCACCTCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTAGGCACACGGGTCACg < 1:2538433/140‑1 (MQ=255) tAGGAAATAACACTATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGAGCGCTTATACACACGGGTCACGGGCTCTAAAGCGaa > 1:3981143/1‑140 (MQ=255) aaCACTATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCCGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACCCGGGTCACGGGCTCTAAAGCGAATTCGCttt > 1:3223550/1‑140 (MQ=255) aaCACTATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCttt > 1:2190595/1‑140 (MQ=255) cacTATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTtac > 1:331687/1‑140 (MQ=255) caatATGCATTTTTGATACAATAGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTGAAACTGAATCCACCGAGCGCTGATGCACACGGGTCACGTGATCTAAAGAGAATTCGCTTtac > 1:3477347/4‑140 (MQ=255) cTATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTtacta > 1:953410/1‑140 (MQ=255) tATGCATTTTTGATACAATTGCATCGCGGCACATCATCCTTGTACGATCCAGACTTTGACTGTCGGCTTGAGCTTAAACTGAATCAACCGCGCGATGATGCACACGGGGCACGGGCTCTAAAGCGAATTCGCTGtacgcc > 2:2644830/1‑137 (MQ=255) tATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTtactac > 2:492006/1‑140 (MQ=255) tGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTAccg > 1:447674/1‑140 (MQ=255) tGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTAccg > 1:1692058/1‑140 (MQ=255) tGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTAccg > 1:3765803/1‑140 (MQ=255) tGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTAccg > 2:2122569/1‑140 (MQ=255) tGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTAccg < 1:3362729/140‑1 (MQ=255) tGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTAccg > 2:2918785/1‑140 (MQ=255) tGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTAccg > 2:2943135/1‑140 (MQ=255) tGCATTGTTGATACAATTGCATAGCGGCACATCCTCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAACCTGAATCCACCGGGCGCTGAGGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTAccg < 1:3359390/140‑1 (MQ=255) cATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTAccgcc > 2:342867/1‑140 (MQ=255) tttGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTc > 1:1247773/1‑140 (MQ=255) tttGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTc < 1:1983892/140‑1 (MQ=255) tttGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTc < 1:1835526/140‑1 (MQ=255) tttGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTc > 1:170206/1‑140 (MQ=255) tGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCgg < 1:3326295/140‑1 (MQ=255) tGAGACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCgg < 1:1278943/140‑1 (MQ=255) gCATAGCGGCACATCAGCCTTCGCCCCTCCAGACTGTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCGTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCAcc < 2:3344613/140‑1 (MQ=255) gCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGcc < 2:331687/140‑1 (MQ=255) cGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGccc > 1:3890395/1‑140 (MQ=255) cGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCGGccc > 1:2840170/1‑140 (MQ=255) ggCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGcccc > 1:3680289/1‑140 (MQ=255) cacaTCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGa < 2:752958/140‑1 (MQ=255) catcCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGTGATTTCCACCCTGCCCCGAAGGAt > 1:3083814/1‑140 (MQ=255) atcCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATa < 2:177360/140‑1 (MQ=255) atcCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATa < 1:3927179/140‑1 (MQ=255) atcCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCGTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATa < 1:2368067/140‑1 (MQ=255) tcCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTGATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATAc < 1:2976826/140‑1 (MQ=255) ttCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAAt > 1:2104376/1‑140 (MQ=255) tcCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGa > 1:1941174/1‑127 (MQ=255) ccATCCAGACTTTCACTGTCGGCTTCAGGTTAAACTGAATCCACCGCGCGCGTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTGTACTACCGCCGGTCGGGATGTCCACCCTGCCCCGACGGATACAATCTGTa > 1:3396766/1‑140 (MQ=255) aTCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTAtt > 2:3480454/1‑140 (MQ=255) tCCAGCCTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCAGGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGAGACAATCTTTATTc > 2:412010/1‑140 (MQ=255) tCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTc > 2:1662775/1‑140 (MQ=255) tCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTc > 1:116423/1‑140 (MQ=255) tCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTc > 1:3277443/1‑140 (MQ=255) tCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTc > 1:3788246/1‑140 (MQ=255) tCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCAACCCTGCCCCGAAGGATACAATATTTATTc > 1:3641780/1‑140 (MQ=255) aGACTTTCAGTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTCTGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACCATCTTTATTCAtt < 2:3680420/140‑1 (MQ=255) aGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTTTGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGTTTTCCACCCTGCCCCGAAGGATACAATCTTTATTCAtt < 2:3184580/140‑1 (MQ=255) tttCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCAc < 2:1160859/58‑1 (MQ=255) tttCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTc > 1:1160047/1‑140 (MQ=255) tttCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTc > 1:2930266/1‑140 (MQ=255) cACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCtt > 2:1579018/1‑140 (MQ=255) aCTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTa < 1:882181/140‑1 (MQ=255) aCTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTa < 2:447674/140‑1 (MQ=255) tGTCGGCTTCCGCTTAAACTGAATCCACCGCGCGCTTCTGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTAtt < 2:884007/140‑1 (MQ=255) tGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTAtt < 2:1221007/140‑1 (MQ=255) tGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTAtt < 2:2431701/140‑1 (MQ=255) tGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTAtt < 2:3742338/140‑1 (MQ=255) tGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTAtt < 1:342867/140‑1 (MQ=255) tGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTAtt < 2:3290161/140‑1 (MQ=255) tCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTgg < 1:1541026/140‑1 (MQ=255) tCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTgg > 2:2594504/1‑140 (MQ=255) tCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTAGGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTgg < 1:3260251/140‑1 (MQ=255) ggCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCt > 2:3057537/1‑140 (MQ=255) cTTCAGCTTAAACTGAGTCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCtat < 1:580086/140‑1 (MQ=255) cTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCtat < 1:2263876/140‑1 (MQ=255) cTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCtat < 1:4158704/140‑1 (MQ=255) aGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATtata > 2:1657116/1‑140 (MQ=255) cTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGcc < 2:3822563/93‑1 (MQ=255) ttAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATTATAGCg < 2:3988881/140‑1 (MQ=255) taaCTGAATGCAGAGCGCGAGTATGCACACGGGTCACGGGCTATAAAGCGAATTGGCTTTACGACCGCCGGTCGGGATTTCCAGCCTGCGCGGAAGGATACACTCTTTATTCATTTGTCCTTATTGGCTATTATAGCGAt < 2:3602795/139‑1 (MQ=255) ataCTGAATCCACCGCGCGCCTATGCACACGGGTCACGGGCTCTAACGCGAATTCGCTTTACTACCGCCGGTCGGGAATTCCACCCGGCCCCGACGGATACACTCTTTCTAGATTTGTCCTTATTGGCTATTATAGCgct < 2:1848525/138‑3 (MQ=255) aaaCTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATTATAGCGAt < 2:2070706/140‑1 (MQ=255) aaaCTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATTATAGCGAt < 1:2892275/140‑1 (MQ=255) aaaCTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATTATAGCGAt < 2:2277652/140‑1 (MQ=255) aaaCTGAATCCACCGCGCGCTTAGGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATTATAGCGAt < 1:3999780/140‑1 (MQ=255) aaaCTGAATCCACCGCGCGCGTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATTATAGCGAt < 1:2372313/140‑1 (MQ=255) aaaCTGAATCCACCGCGCGCGGATGCACACGGGTCCCGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCGGCCCCGAACGATACAAACTTTATTCATTTGTCCATATTGGCTATTATAGCGAt < 2:3976473/140‑1 (MQ=255) aaTCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTTCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATTATAGCGATCCtttt > 2:642887/1‑140 (MQ=255) aaTCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATTATAGCGATCCtttt > 2:4213318/1‑140 (MQ=255) aaTCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATTATAGCGATCCtttt > 2:1937409/1‑140 (MQ=255) aaTCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATTATAGCGATCCtttt > 1:882694/1‑140 (MQ=255) aaTCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTGATTGGCTATTATAGCGATCCttgt > 2:233907/1‑138 (MQ=255) aTCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATAc > 1:1386386/1‑94 (MQ=255) ccACCGCGCGCTGAGGCACACGGGTCACGCGCTCGAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATTATAGCGATCCTTTTTaa < 2:1638100/140‑1 (MQ=255) cgcgcgCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATTATAGCGATCCTTTTTAAAGTa < 1:3613310/140‑1 (MQ=255) cgcTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATTATAGCGATCCTTTTTAAAGTACGCa < 1:2918785/140‑1 (MQ=255) cgcTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATTATAGCGATCCTTTTTAAAGTACGCa < 1:3015529/140‑1 (MQ=255) cgcTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATTATAGCGATCCTTTTTAAAGTACGCa < 1:1569755/140‑1 (MQ=255) | AAAATCCGGGGCTTTAGGTATTTTACGCAATAGGAAATAACACTATGCATTTTTGATACAATTGCATAGCGGCACATCATCCTTCTCCCATCCAGACTTTCACTGTCGGCTTCAGCTTAAACTGAATCCACCGCGCGCTTATGCACACGGGTCACGGGCTCTAAAGCGAATTCGCTTTACTACCGCCGGTCGGGATTTCCACCCTGCCCCGAAGGATACAATCTTTATTCATTTGTCCTTATTGGCTATTATAGCGATCCTTTTTAAAGTACGCA > NZ_CP034943/2300725‑2300999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |