| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,775,852 | A→G | 5.4% | G145G (GGT→GGC) | EO946_RS14350 ← | TVP38/TMEM64 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,775,852 | 0 | A | G | 5.4% | 619.8 / 16.8 | 186 | G145G (GGT→GGC) | EO946_RS14350 | TVP38/TMEM64 family protein |
| Reads supporting (aligned to +/- strand): ref base A (122/54); new base G (6/4); total (128/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.64e-01 | |||||||||||
Only 100 of 191 total aligned reads displayed.
TATACAAAGCGAGCACCATAAAGAAAGCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGAATGGCTTCCAGCTTTTCGTAATGGCCGTTCTTTTTCGCAGCAAA > NZ_CP034943/2775713‑2775986 | tataCAAAGCGAGCCCCATAAAGAAAGCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTCACATTGGAAAGa > 1:922505/1‑140 (MQ=255)tataCAAAGCGAGCACCATAAAGAAAGCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGa > 1:1331864/1‑140 (MQ=255) taCAAAGCGAGCACCATAAAGAAAGCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGAcc < 2:395330/140‑1 (MQ=255) aaGCGAGCACCATAAAGAAAGCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGcc > 1:2038910/1‑140 (MQ=255) aaGCGAGCACCATAAAGAAAGCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGcc > 1:2679521/1‑140 (MQ=255) aaGCGAGCACCATAAAGAAAGCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTGTGACATAGGAAAGACCTGcc > 1:3821952/1‑140 (MQ=255) aaGCGAGCACCATAAAGAAAGCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCACAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGcc > 1:62592/1‑140 (MQ=255) gAGCACCATAAAGAAAGCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGAc < 1:3939019/131‑1 (MQ=255) gCACCATAAAGAAAGCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACCTTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATaa > 2:35155/1‑140 (MQ=255) gCACCATAAAGAAAGCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATaa > 2:238568/1‑140 (MQ=255) gCACCATAAAGAAAGCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATaa > 1:705922/1‑140 (MQ=255) gCACCATAAAGAAAGCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATaa > 2:2836733/1‑140 (MQ=255) gCACCATAAAGAAAGCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATaa > 1:3659445/1‑140 (MQ=255) gCACCATAAAGAAAGCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATaa > 2:3306264/1‑140 (MQ=255) gCACCATAAAGAAAGCGGGCAGATTGCCAGCCAAAAACCTCTCACCCAGCACATTAAGCGCAATAGTCACAGGGATGATTCACGCAGCCGTCGCCGAAAAATACGTCAGCGCTTTGACAATGGAAAGACCTGCCGCATaa > 1:1871908/1‑140 (MQ=255) tAAAGAAAGCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGAca > 2:1797399/1‑140 (MQ=255) gaaagCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGAcaaaat < 2:2582160/140‑1 (MQ=255) aaagCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGAcaaaatc > 1:153432/1‑140 (MQ=255) gCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGAGATTGGAAAGACCTGCCGCATAACTGAcaaaatcaaa > 2:1444193/1‑140 (MQ=255) gCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGACAGACCTGCCGCATAACTGAcaaaatcaaa > 2:3578370/1‑140 (MQ=255) gCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCCTAACTGAcacaatctaa > 2:2572438/1‑140 (MQ=255) gCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGAcaaaatcaaa > 2:2938321/1‑140 (MQ=255) gCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGAcaaaatcaaa > 2:500975/1‑140 (MQ=255) gCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGAcaaaatcaaa > 2:4217863/1‑140 (MQ=255) gCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGAcaaaatcaaa > 1:3639534/1‑140 (MQ=255) gCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGAcaaaatcaaa > 2:3149111/1‑140 (MQ=255) gCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGAcaaaatcaaa > 2:1335752/1‑140 (MQ=255) gCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGAcaaaatcaaa > 2:3405034/1‑140 (MQ=255) gCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGAcaaaatcaaa > 2:3480956/1‑140 (MQ=255) gCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGAcaaaatcaaa > 2:2033209/1‑140 (MQ=255) gCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGAcaaaatcaaa > 2:3558640/1‑140 (MQ=255) gggCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGAcaaaatcaaaat > 1:1119614/1‑140 (MQ=255) aGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGAt < 2:2535085/140‑1 (MQ=255) ccaAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGAtt > 1:2655689/1‑140 (MQ=255) cGCACCCAGCACGTTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAaaagaa < 1:2924906/140‑1 (MQ=255) cGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTaaacgta > 1:3737094/1‑136 (MQ=255) agCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAAGACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAaaagaa < 2:2156695/139‑1 (MQ=255) cccATCACATGAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGAAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGat < 2:3645433/140‑1 (MQ=255) cccAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGat < 2:2697752/140‑1 (MQ=255) cacAGCACATTAAGCGCAATAGTCCCAGGGATGATTCACGCAGCCGTAGCCGCAAAATACGTCAGCGCTTTTACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGat < 2:2067052/138‑1 (MQ=255) aGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGAtata > 1:665722/1‑140 (MQ=255) aGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGAtata > 2:3697378/1‑140 (MQ=255) gCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTCAAAGAAAGATATaa > 1:1272672/1‑140 (MQ=255) gCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATaa > 1:1987200/1‑140 (MQ=255) ttAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATCTaaaaaaa > 2:45131/1‑140 (MQ=255) ttAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATaaaaaaa > 2:2889983/1‑140 (MQ=255) ttAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATaaaaaaa > 2:1438824/1‑140 (MQ=255) ttAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATaaaaaaa > 2:1578316/1‑140 (MQ=255) ttaGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCTCATCAAAATAAGTCAGCGCTTTGACATTGGAAATACCTGCCGCATAACTGACAAAATCAAAATTGATCGGAAGGATTCTTAAAAGAAAGATATAAAAAAAt < 1:1972847/138‑1 (MQ=255) aaGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATc > 1:3901646/1‑140 (MQ=255) aaGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATc > 1:3470950/1‑140 (MQ=255) cgcAAGAGTCCCAGGTATGATTCCCTCAGACGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTTACAAAATCAAAATTGATCGGCAGGTTTCTTAAAAGAAAGATATAAAAAAATCCGt < 2:898683/140‑1 (MQ=255) cAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTa < 2:665722/140‑1 (MQ=255) atcgTCCCAGGGATGATTCCCACAGCCGTTGCGGCAAAATACGGCAGCGCTTTGACATTGGAAAGGCCTGCCGCATAGCTGACGAAATCAAAATTGATCGGCAGGATTCTCAAAAGAAAGATATAGAAAAATCCGTTAtc > 1:2640036/4‑140 (MQ=255) atcgTCCCAGGGATGATTCCCACAGCCGTTGCGGCAAAATACGGCAGCGCTTTGACATTGGAAAGGCCTGCCGCATAGCTGACGAAATCAAAATTGATCGGCAGGATTCTCAAAAGAAAGATATAGAAAAATCCGTTAtc > 1:2346410/4‑140 (MQ=255) aTAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTAtc > 1:2979427/1‑140 (MQ=255) ccAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCAt > 1:1147946/1‑140 (MQ=255) ccAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCAt < 1:1243874/140‑1 (MQ=255) cAGGGATGATTCCCGCAGCCGTCGCCTCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATc < 2:2243000/140‑1 (MQ=255) cAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATc < 1:2836733/140‑1 (MQ=255) cAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATc < 1:2287952/140‑1 (MQ=255) cAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATc < 2:3901646/140‑1 (MQ=255) cAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATc < 2:4041803/140‑1 (MQ=255) gggATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTg < 2:529441/140‑1 (MQ=255) gggATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTg > 1:1656217/1‑140 (MQ=255) gggATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTg > 1:1614952/1‑140 (MQ=255) gggATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTg > 2:3099812/1‑140 (MQ=255) tgatTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTc > 2:3019795/1‑140 (MQ=255) tgatTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTc > 2:3019703/1‑140 (MQ=255) tgatTCCCGCAGCCGTCACCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTc > 2:2342439/1‑140 (MQ=255) gatTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAaaagaa > 2:116267/1‑104 (MQ=255) gatTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTg > 2:2223838/1‑135 (MQ=255) gatTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTg < 1:2223838/135‑1 (MQ=255) gatTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCt > 1:1161842/1‑140 (MQ=255) gatTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCt > 1:4331471/1‑140 (MQ=255) gatTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCt > 2:717128/1‑140 (MQ=255) atTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATc < 2:3188992/132‑1 (MQ=255) atTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTg > 1:2768525/1‑140 (MQ=255) atTCCCACAGCCGTTGCGGCAAAATACGGCAGCGCTTTGACATTGGAAAGGCCTGCCGCATAGCTGACGAAATCAAAATTGATCGGCAGGATTCTCAAAAGAAAGATATAGAAAAATCCGTTATCCTCCATTTGCTTCTg > 2:171300/1‑140 (MQ=255) atTCCCACAGCCGTTGCGGCAAAATACGGCAGCGCTTTGACATTGGAAAGGCCTGCCGCATAGCTGACGAAATCAAAATTGATCGGCAGGATTCTCAAAAGAAAGATATAGAAAAATCCGTTATCCTCCATTTGCTTCTg > 2:178380/1‑140 (MQ=255) tCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGaa < 1:890001/140‑1 (MQ=255) tCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGaa < 1:2787443/140‑1 (MQ=255) tCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGaa < 1:3253608/140‑1 (MQ=255) tCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGaa < 1:563041/140‑1 (MQ=255) tCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGaa < 1:1444121/140‑1 (MQ=255) cAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTCAAAGACAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGACTGGCt > 2:372769/1‑140 (MQ=255) gTCGCCGCAACATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGAATGGCTTCCAg < 1:2485877/140‑1 (MQ=255) gTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGAATGGCTTCCAg < 1:3379768/140‑1 (MQ=255) gTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGAATGGCTTCCAGCTTTTCGTAATGGcc > 1:4187020/1‑140 (MQ=255) aGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTa > 1:477978/1‑93 (MQ=255) aGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGAATGGCTTCCAGCTTTTCGTAATGGCCGtt > 2:2789148/1‑140 (MQ=255) cgcTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGAATGGCTTCCAGCTTTTCGTAATGGCCGTTCt > 1:1942079/1‑140 (MQ=255) cTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGAATGGCTTCCAGCTTTTCGTAATGGCCGTTCttt > 1:3245883/1‑140 (MQ=255) tGGAAAGGCCTGCCGCATAGCTGACGAAATCAAAATTGATCGGCAGGATTCTCAAAAGAAAGATATAGAAAAATCCGTTATCCTCCATTTGCTTCTGTATGGCTTCAAGCCTTTCGTAATGCCCGTTCTTTTTCgccgaa < 2:2640036/140‑5 (MQ=255) tGGAAAGGCCTGCCGCATAGCTGACGAAATCAAAATTGATCGGCAGGATTCTCAAAAGAAAGATATAGAAAAATCCGTTATCCTCCATTTGCTTCTGTATGGCTTCAAGCCTTTCGTAATGCCCGTTCTTTTTCgccgaa < 2:908238/140‑5 (MQ=255) tGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCTGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGAATGGCTTCCAGCTTTTCTTAATGGCCGTTCTTTTTCgaagca > 1:2315587/1‑140 (MQ=255) tGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGACAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGAATGGCTTCCAGCTTTTCGTCATGGCCGTTCTTTTTCgcagca > 1:4030663/1‑140 (MQ=255) tGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATCTAAAAAAATCCGTTATCCTCCATCTGCTTCTGAATGGCTTCCAGCTTTTCGTAATGGCCGTTCTTTTTCgcagca < 1:3098843/140‑1 (MQ=255) tGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGAATGGCTTCCAGCTTTGCGTAATGGCCGTTCTTTTTCgcagca > 2:3437828/1‑140 (MQ=255) gAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGAATGGCTTCCAGCTTTTCGTAATGGCCGTTCTTTTTCGCAGcaaa > 2:2412986/1‑140 (MQ=255) | TATACAAAGCGAGCACCATAAAGAAAGCGGGCAGATTGCCAGCCAAAAAGCTCGCACCCAGCACATTAAGCGCAATAGTCCCAGGGATGATTCCCGCAGCCGTCGCCGCAAAATACGTCAGCGCTTTGACATTGGAAAGACCTGCCGCATAACTGACAAAATCAAAATTGATCGGCAGGATTCTTAAAAGAAAGATATAAAAAAATCCGTTATCCTCCATCTGCTTCTGAATGGCTTCCAGCTTTTCGTAATGGCCGTTCTTTTTCGCAGCAAA > NZ_CP034943/2775713‑2775986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |