| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 438,792 | C→A | 8.7% | intergenic (‑58/‑48) | gabR ← / → gabT | transcriptional regulator GabR/4‑aminobutyrate‑‑2‑oxoglutarate transaminase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 438,792 | 0 | C | A | 8.7% | 511.4 / 6.0 | 217 | intergenic (‑58/‑48) | gabR/gabT | transcriptional regulator GabR/4‑aminobutyrate‑‑2‑oxoglutarate transaminase |
| Reads supporting (aligned to +/- strand): ref base C (117/73); new base A (4/23); total (121/96) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.86e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 221 total aligned reads displayed.
TTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAACGGCAACCGCAG > NZ_CP034943/438658‑438931 | ttttttTGTTTTTTCTAAATTTGCTGATAGATATAATCGTCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTACATTTGCAGATTCTCCTTCTGGTACCATAAAAAAGTTATAATTGGTACTTTTCATCATACCaaaaa < 1:3668990/140‑1 (MQ=255)ttttttAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCaaaaa < 1:3171199/140‑1 (MQ=255)ttttttAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCaaaaa < 1:111402/140‑1 (MQ=255) ttttGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGATCGGTCGATTTTGAATGTGATGTCCATTTGCAGATTCTCCGTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGa < 2:1229935/140‑1 (MQ=255) ttttGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCAGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGa < 2:3040047/140‑1 (MQ=255) aTAACTTTGCTGATAGATCTAATCGGCTTGTTCTGAGCGGTCGAGTGAGAATGTGATGTCCAATTGCAGATTCTCCATCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGt < 1:2838442/140‑1 (MQ=255) aTAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGt < 1:1544316/140‑1 (MQ=255) aTAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGt < 2:2136752/140‑1 (MQ=255) ttGCTGATAGATATAATCGGATTTTTCTGAGCGGTCGAGTTTGATTTTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAATTTATAATTGGTACTTTTCATCATACCAAAAATAAGTCAGAATGGTAATaaa < 1:1484052/140‑1 (MQ=255) ctataCTCGGCTTGTACTGAGCCGTCGAGTGTGAATGTGATGTCAATTTGCTGATTATACTTCTGTTACCATCAAAAAGTTTTTATTTGTACTTTTCATTATACCAAAATGTTGTCAGATTGTTATGATAATAGCGACAg < 2:2179854/139‑1 (MQ=255) atttaATCGGCTTGTTCTGAGGGGTGGAGTGTGAATGTGATGTCCTTTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGTTAAGAAAATAGCGACAg < 2:2407572/137‑1 (MQ=255) ataATCGGCTTGTTCTGAGCGGTCTAGTGTTATTGTGATGTCCATTTGCAGATTCTCCTTCTGGTACAATCAAAAAGTTATAATTGTTACTTTTAATCATACCAAAAAGAAGTCAGAATGTTAAGAAAATAGCGACAggg < 2:785137/140‑1 (MQ=255) aaTGGGCTTTTTCTGAGCGGTCGAGTGTGAATTTGATGTCCATTTGCAGTTTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAggggg < 2:2360490/140‑1 (MQ=255) tCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGAc > 1:3264922/1‑140 (MQ=255) gggCTTTTTCTGAGCGGTCGTGTGTTAATGTGATTTCATTTTGCATATTCTCCTTCTGTTACCATCAAAAATTTATAATTGGTACTTTTCATCATACAAAAAAGAAGTCATAATGGTAAGAAAATAGCGACAGGGGGACa < 2:535168/139‑1 (MQ=255) gggCTGGTGCTGCGCGGTCGAGTGTGAATGTGATGGCCATTTGCACATTCTCCTTCGGGTACCATCAAAAAGTTATAATTGGAACTTTTCATCATACCAAAAAGAAGTCACAATGGTAAGAAAATAGCGACAGGGGGACa < 2:2224768/139‑1 (MQ=255) gCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATa > 2:2870061/1‑140 (MQ=255) cTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATAc > 2:4158617/1‑140 (MQ=255) ttGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACg > 1:3829512/1‑140 (MQ=255) ttGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACg > 1:1079759/1‑140 (MQ=255) tGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGc > 2:3328748/1‑140 (MQ=255) tGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGc > 2:1041034/1‑140 (MQ=255) tGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTACATCATACCAAAAAGAAGTCAGAATGTTAAGAAAATAGAGACAGGGGCACATACGc > 2:2302801/1‑140 (MQ=255) tGTTCGGAGGGGTCTTTTGTGAATGTGATGTCCATTTGCAGATTCTCCTACTGGTACCAACAAAAATTTATAATTGGTACTTTTCATCATACAAAAAATAAGACAGAATGGTAACAAAATAGCGACAGGGGGACATACGc < 1:3936178/140‑1 (MQ=255) gTTGTGGGCGGACGTGTGTCAATGTGTTGTCAAGTTGCAGATTCTCCTTCTGGTACCATCAAAATGTTATAATTGGTAGTTTTCAACATACAAAAAATAAGTCAGAATTGTATGAAAATAGCGACAGGGGGACATACGCa < 2:2713692/140‑1 (MQ=255) gTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCa < 2:910582/140‑1 (MQ=255) ttCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCAt > 2:3130064/1‑140 (MQ=255) ttCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCAt > 2:1163181/1‑140 (MQ=255) ttCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCAt > 2:508576/1‑140 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACATGGGGACATACGCATGAGTc > 1:1273344/1‑140 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTc > 1:1773672/1‑140 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTc > 1:1011961/1‑140 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTc > 2:1181967/1‑140 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTc > 2:4191876/1‑140 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTc > 1:3296546/1‑140 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTc > 2:3694727/1‑140 (MQ=255) gggcGAGTGTGAATGTTATTTCCATTGGCACATTCACCTTCTGGAACCATCAAAAAGTTTTACTTGCTACTTTTCATAATACAAAAAATAAGTCAGAAGGGTATGAAAAAAGCGACAGGGGGACATACGCATGAGTCaaa < 2:3034362/137‑1 (MQ=255) gTCGAGTTTGAATGTTATGTCCATTTGCATATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACAAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaac < 2:3498343/140‑1 (MQ=255) gTCGAGTGTTAATGTTATGTACTTTTGCATATTCTCCTTCGGGTACAATAAAAAAGTTATATTTGGTACTTTACATAATACAAAAAATAAGAAAGATTGTTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaac < 1:2981311/140‑1 (MQ=255) gTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaac > 1:500272/1‑140 (MQ=255) tCGAGTGTGACTGTGATGTCCATGTGCAGATTCTCCTTCTGGTACCAGCAAAAAGTGATCATTGGTACTTTTCATCATACCAAAAAGAAGTCCGAATGGTCAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 1:2061368/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGACTGGTAAGAAAATAGCGACAGGGGGACATAAGCATGAGTCAaaca > 2:830332/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 2:3908268/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 2:977631/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 2:1696819/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 2:166386/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 2:1497213/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 1:3540420/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 1:3607833/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTACTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACAAAAAAGAATTCAGAATGGTAAGAAAATAGCGACAGGGGGACATAAGAATGAGACAaaca > 2:703113/1‑140 (MQ=255) aacattgtcAATGTGATGTCAATAAGAAAAATCTACTTATCGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 2:1912640/6‑140 (MQ=255) ttcattgtgATGACCATTTCACTTTTCTCCTTCTGGTACCAAAAAAAATTTATAATTGGAACTTTAAATCATACCAAAAATAAGACAGATTGTTAACAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACagca < 1:2214942/135‑1 (MQ=255) gttaaTTTGATGTCCTTTTGCTTTTTCTACTTCTGTTAACATAAAAAATTTATAATTGGTACTTTTCATCATACCAAAAATAAGTCAGAATGGTAATAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACagca < 2:2157142/137‑1 (MQ=255) gtgATTGTGATGGCCTTTTTCTTATTCTCCTTGTGGTACCATAAAAAATTTTTATTTGGTACTTTTAATCATACAAAAAATAAGTAAGATTGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACagca < 1:3490288/140‑1 (MQ=255) gtgAATGTGATGTCCATTTGCATATTCTCCTTCTGGTACCATAAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACagca < 2:3957823/140‑1 (MQ=255) aTGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCACAAAGAAGTCAGAATGCTAAGAAAATAGCGACAGGGGGACATACGCAGGAGTCAAACAACagcaagca > 2:2485634/1‑140 (MQ=255) aTGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATATCGACAGGGGGACATACGCATGAGTCAAACAACagcaagca > 2:2840498/1‑140 (MQ=255) aTGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACagcaagca > 1:2769776/1‑140 (MQ=255) aTGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACAAAAAAGAAGTCAGAATGCTAAGAAAATAGCGACAGGGGGACATACGCAGGAGTCAAACAACagcaagca > 2:1472723/1‑140 (MQ=255) ttttaTGTCCTTTTCCATATTCTCCTTCTGTTACCATAAAAATGTTATAATTGTTAATTTTCAACATACAAAAAATAACTCATATTGGTAATAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCAt < 1:977631/136‑1 (MQ=255) tgttATGTCCATGTGAATATTCTCCTTCTGGTACAATAAAAAATTTATAATTGTTACTTTTAATCATACCAAAAAGAAGTCAGAATGTTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCAt < 2:3409469/140‑1 (MQ=255) tgtgATGTCCATTTGCAGATTCTCCTTCTGGTACCATAAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCAt < 2:4037375/140‑1 (MQ=255) gATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCAc > 2:4279985/1‑140 (MQ=255) aTGTCCATTTGCAGATTCTCCTTCCGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAATTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACg > 2:2901731/1‑140 (MQ=255) aTGTCCATTTGCAGATTATCATTCTGGTACCATCAAAAAGATATAATAGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGAGACATGGCCACATACGCATGAGTCAAACAAAAGAAAGCATCAct > 2:867563/1‑139 (MQ=255) gTCCTTTTGCAGATACTCCTACTGGTACAATCAAAAATTTATAATTGGTACTTTTCATCATACAAAAAACAAGTCACAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGAc < 1:408680/140‑1 (MQ=255) gTCCATTTGCAGATACTACTTCTGGAACCAACAAAAAGTTATAATTGTTACTTTACATCATACAAAAAAGAAGTAAGAATGCTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGAc < 1:4222113/140‑1 (MQ=255) tttGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGccc > 2:2393261/1‑140 (MQ=255) cAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTg > 2:1441406/1‑140 (MQ=255) tctcCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGgcagc > 2:2323665/1‑140 (MQ=255) tcCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCaa > 1:2799116/1‑140 (MQ=255) ggTACCATAAAATAGTTATTTTTGTTATTTTAAATCATACCAAAAAGAAGTCAGATTGTAAATAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACggg < 1:2609021/140‑1 (MQ=255) gTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGa > 1:1203076/1‑140 (MQ=255) gTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGa > 1:1202558/1‑140 (MQ=255) aCCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGc > 2:612942/1‑140 (MQ=255) aCCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGc > 2:2604512/1‑140 (MQ=255) tCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGTATGGGAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCACtt > 2:2204633/1‑140 (MQ=255) tCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCCACACCGGGAGCCAtt > 2:2985861/1‑140 (MQ=255) tCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAAtt > 2:4088272/1‑140 (MQ=255) tCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAAtt > 2:756445/1‑140 (MQ=255) aaaaGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGTTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGt < 1:2896068/140‑1 (MQ=255) gTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGACAATAGCGACATGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACCGGAGCAATACGTCTcc > 2:3613062/1‑140 (MQ=255) ttATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGTTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCa > 1:820385/1‑140 (MQ=255) ttATAATTGGTACTTTTCATCATACAAAAAAGAAGTCATAAGGGAAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCa < 1:2232556/140‑1 (MQ=255) tataATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCaa > 1:2178843/1‑140 (MQ=255) ataATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCaaa > 1:613662/1‑140 (MQ=255) aTTGGTAGTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGgt < 2:3638166/140‑1 (MQ=255) gTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGa > 1:3001923/1‑140 (MQ=255) tACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAg > 2:2057214/1‑140 (MQ=255) gttttCATCATACCAAAAATAAGCCAGATTGGTAATAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCa < 1:166386/139‑1 (MQ=255) cTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAATCGGGAGCAATTCGTCTCCAAAGGTGTGAGCa < 2:3250241/140‑1 (MQ=255) cTTTTCATCATACCAAAAACAAGTAAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCa < 2:1601099/140‑1 (MQ=255) tttCATCCTCCCGAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAAc < 2:215574/140‑1 (MQ=255) tttCATCATACCAAAAATAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAAc < 1:2374204/140‑1 (MQ=255) aatcatACCAAAAATAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAACGGc < 2:1398677/139‑1 (MQ=255) atcatACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAACGGCa > 1:3129247/1‑140 (MQ=255) tACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAACGGCAACCg < 2:1202628/140‑1 (MQ=255) tACCAAAAAGAAGTCACAAGGTTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAACGGCAACCg < 1:428138/140‑1 (MQ=255) aCCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAATCAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAACGGCAACCGc > 2:2702374/1‑140 (MQ=255) cAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAACGGCAACCGCAg > 2:1687902/1‑140 (MQ=255) | TTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTCTCCAAAGGTGTGAGCAACGGCAACCGCAG > NZ_CP034943/438658‑438931 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |