| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 452,125 | T→A | 46.3% | K146I (AAA→ATA) | EO946_RS02320 ← | dienelactone hydrolase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 452,125 | 0 | T | A | 46.3% | 90.6 / inf | 261 | K146I (AAA→ATA) | EO946_RS02320 | dienelactone hydrolase family protein |
| Reads supporting (aligned to +/- strand): ref base T (61/78); new base A (58/63); total (119/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 267 total aligned reads displayed.
TTCTGCCTCGTTTTTGATGATGGAAAGCGTTTTGAAGAAGAGTGGCCTGTCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCTCACCTCAGGCATA > NZ_CP034943/451989‑452262 | ttCTGCCTCGTTTTTGATGATGGAAAGCGTTTTGAAGACGCGTGGCCTGTCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGttttt < 1:1044405/140‑1 (MQ=255) cTGCCTCGTTTTTGATGATGGAAAGCGTTTTGAAGAAGAGTGGCCTGTCAAAATAAACCGACTCGGGATTGGCAAAGCCCTGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTg > 1:2131402/1‑140 (MQ=255) cTGCCTCGTTTTTGATGATGGAAAGCGTTTTGAAGAAGAGTGGCCTGTCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATTCTGTTGTTCCCTCAGTTTTTTg > 1:3331267/1‑140 (MQ=255) gCCTCGTTTTTGATGATGGAAAGCGTTTTGAATAATAGTGGCCTGACAAAATAAACCGACTCGTGATTGGCAAAGCCATGAAGAGCATAAAATTGATAAATCTCCAAATTGGGATTCTGTTGTTCCCTCAGTATTTTGAt < 1:248841/140‑1 (MQ=255) tttGATGATGGAAAGCGTTTTGAAGAAGAGTGGCCTGTCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCg < 1:3294513/140‑1 (MQ=255) gattttgGAAAGCGTTTTGAAGAAGAGTGGCATGTCAAAATAAACCGACTCGGGATTGGAAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCaa < 1:1004257/135‑1 (MQ=255) atgGAAAGCGTTTTGAAGAAGAGTGGCCTGTCAAAATAAACCGACTCGGGATTTGCAAAGCCATTAATAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCACTCAGTTATTTGATAAGAACCGCGACATc > 1:2740416/1‑140 (MQ=255) tgGAAAGCGTTTTGAAGAAGAGTGGCCTGTCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCa > 1:3716177/1‑140 (MQ=255) aatgggTTTTTAACAAGTTTGCCCTTTAAAAAAAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTTTTGTTCCCTCAGTATTTTTATAAGAACCGCAACATCAAac < 1:3267107/135‑1 (MQ=255) tgCGTTTTTAAGTTGAGTGGCGTGTAAAAATAAACGGACTCTGTATTGGAAAAGCAATGAAGAGAATCAAATTGATAAATCTCAAAATTGGGATGCTGTTTTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAacga < 1:3883808/139‑1 (MQ=255) aggtttttGAAGAACAGGGGCCTGAAAAAAAAAACCGACCGGGGATTGGCAAAGCCTTGAAGAGCATCAAATTGATAATTCTCCAATTTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAacga < 1:3682817/136‑1 (MQ=255) aGCGTTTTTAAGAAGCTTGGCCTGTCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAacga < 2:4299148/140‑1 (MQ=255) aGCGTTTTGAAGAAGAGTGGCCTGTCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAacga < 2:2744397/140‑1 (MQ=255) tttGAAGAAGAGTGGCCTGTCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGtt > 2:544864/1‑140 (MQ=255) tGGCCTGTCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGa > 2:3839119/1‑140 (MQ=255) gcatGTCAAAATAAACCGACTCGGTATTGGCATAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGTTGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGaaa < 2:2041252/137‑1 (MQ=255) gCCTTTCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGAATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAATAACCGCAACATCACACGACGGTTCATATGAAGGGaaa < 1:4073677/140‑1 (MQ=255) gCCTTTAAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTTATAAATCTCCAAATTGGGATGCTTTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGaaa < 2:3103505/140‑1 (MQ=255) gCCTGTCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGaaa > 1:4207838/1‑140 (MQ=255) gCCTGTCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGaaa < 2:2501932/140‑1 (MQ=255) gCCTGTAAAAATAAACCGACTCGGTATTGGCAAAGCCATGAATAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGAAACATCAAACGACGGTTCATATGAAGGGaaa < 1:1159130/140‑1 (MQ=255) gCCTGTAAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACAACAAACGACGGTTCATATGAAGGGaaa < 1:2105299/140‑1 (MQ=255) gCCTGTAAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGAATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGaaa < 1:1657740/140‑1 (MQ=255) gCCTGACAAAATACACCGACTCGGGATTGGCAAAGCCATGACGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCATTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGaaa < 1:3552084/140‑1 (MQ=255) gCCTGACAAAATAAACCGACTCGGGTTTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGaaa < 1:1711381/140‑1 (MQ=255) tGTCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGaaaaaa > 1:1912181/1‑139 (MQ=255) tGTCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAAc > 1:716367/1‑140 (MQ=255) tCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACaa > 1:1866220/1‑140 (MQ=255) tCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACaa > 1:1596947/1‑140 (MQ=255) tCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACaa > 1:3452405/1‑140 (MQ=255) tCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACaa > 1:38153/1‑140 (MQ=255) aTAAACCGACTCGGTATTGGCAAAGCCATGAAGAGCATCAAATTGTTAATTCTCAAAATTGGTATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGa < 2:4233833/140‑1 (MQ=255) aTAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGa < 1:544864/140‑1 (MQ=255) tAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGACGGGAAAAACACTAGGAc > 2:348269/1‑140 (MQ=255) tAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGAc > 2:2834417/1‑140 (MQ=255) aCCGACTCGGTATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCgg < 2:1647045/140‑1 (MQ=255) aCCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCgg > 1:1929370/1‑140 (MQ=255) ccGACTCGGGATTGGAAAAGCCATGAAGAGCATCAAATTGATAACTCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCCACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCggg < 2:2850953/140‑1 (MQ=255) aCTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAg > 1:828225/1‑140 (MQ=255) aCTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAg > 2:909069/1‑140 (MQ=255) cTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGa > 2:2268296/1‑140 (MQ=255) cTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGa > 2:4135513/1‑140 (MQ=255) gATTGGCAAAGCCATGAAGACCTTCAAATTTATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGTTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGc < 2:4205721/140‑1 (MQ=255) ttGGAAAAGCCATGAAGAGCATAAAATTTATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCAc < 1:2704616/140‑1 (MQ=255) ggCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGt > 1:4316562/1‑140 (MQ=255) tccATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTATTGATAAGAACCGCAACATCAAACGAAGGTTCATATGAAGGGAAAAACAATAGGACCGGGAAGACTGGCACCTGATGaa > 2:4177652/2‑140 (MQ=255) gCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGaa > 2:2633257/1‑140 (MQ=255) gCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGaa > 2:2110464/1‑140 (MQ=255) gCCAGGAAGAGCATCAAATTGATAAATCTCCAAATTGAGATTCTGTTGTTGCCTCAGTATTTTGATACTAACCGCAACATCAAACTACGGTGCAGATATAGGGAAAAACAATAGGACCGGGCCGGCTGGCACGTGATGaa > 2:1693218/1‑140 (MQ=255) tGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAgaga > 2:392244/1‑140 (MQ=255) gAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAATAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGaa > 1:2028965/1‑140 (MQ=255) gAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCggg < 1:2661451/116‑1 (MQ=255) gAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGaa > 1:3065460/1‑140 (MQ=255) gAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGaa > 1:1968221/1‑140 (MQ=255) agCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATcgc > 1:500686/1‑140 (MQ=255) agCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATcgc > 1:1382988/1‑140 (MQ=255) agCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATcgc > 1:4133169/1‑140 (MQ=255) tcATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATcgcg < 2:1320176/139‑1 (MQ=255) caaTCAAATTGATAAATCTCAATATTTGGTTGCTGTTGTTCCATATTTATTTTTATAATAACCTCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATcgcg < 1:379707/138‑1 (MQ=255) cATCAAATTGATAAATCTCCACATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCCAACGACGGTGCATATGAAGGGAAAAAAAATAGGACCGGTCCGACTGGCACGTGATGACGAGCATcgcga > 2:3707029/1‑139 (MQ=255) cATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGt > 1:4179272/1‑140 (MQ=255) cATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGt > 2:3021889/1‑140 (MQ=255) cATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGt > 1:3020056/1‑140 (MQ=255) cATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACAGGGCAAACTGGCACGTGATGAAGAGAATcgctt > 2:3678555/1‑138 (MQ=255) cATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAAAAATAGGACCGGGCAGACTGGCACGTGATGAAGAGACTCGCGt > 1:2337644/1‑140 (MQ=255) cATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGGTCATATGAAGCGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGt > 2:2757169/1‑140 (MQ=255) ttGATAAATCTCCAAATTGGGATGCTGTTGGTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCggg < 2:637675/140‑1 (MQ=255) ttGATAAATCTCCAAAGTGGGATTCTGTTGTTCCCTCAGTTTTTTGATAAGACCCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCggg < 2:2594854/140‑1 (MQ=255) tGATAAATCGCCAAATTGGCATGCTGTTGTTCCCTCAGTACTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGa < 1:782652/140‑1 (MQ=255) aTAAATCTCCAACTGGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAAc < 2:3358393/140‑1 (MQ=255) tAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAAcc > 1:481679/1‑140 (MQ=255) tAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAAcc > 1:2609602/1‑140 (MQ=255) aaaTCTCCAAATTGGGATGCTGTTGTTCCCTCAGTATTTTTATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCg < 1:525925/140‑1 (MQ=255) tctcCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGACCCGtaa > 2:2342304/1‑140 (MQ=255) gggATGCTGTTGTGCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGACTGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTAACCGGGACCCGTAATAACAAACAg > 2:720333/1‑140 (MQ=255) gctGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTCATAACAAACAGCt < 1:1781759/138‑1 (MQ=255) gATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCt < 1:3141580/140‑1 (MQ=255) ttttgttCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCt < 1:3466198/138‑1 (MQ=255) tgttgtTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCt < 2:3399701/140‑1 (MQ=255) tgttgtTCCCTCAGTTTTTGGATAAGACCCGCAACAACAAACGACGGTTCATATGAAGGGAAAAACAATCGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCt < 2:2924143/140‑1 (MQ=255) tgttgtTCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCt < 1:3380705/140‑1 (MQ=255) tgttgtTCCATCAGATTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCt < 2:4071659/140‑1 (MQ=255) gttgttCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCTc < 2:3325030/140‑1 (MQ=255) gttgttCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCTc < 2:3802528/140‑1 (MQ=255) ttgttCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCTCa > 1:882662/1‑140 (MQ=255) tCCCTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCTCACCTc < 2:65428/140‑1 (MQ=255) cccTCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCTCACCTCa > 2:1230443/1‑140 (MQ=255) tCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGACCCGTAATAACAAACAGCTCCGCTCACCTCAGGc > 2:2609863/1‑140 (MQ=255) tCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCTCACCTCAGGc > 2:3450474/1‑140 (MQ=255) tCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCTCACCTCAGGc > 1:1462378/1‑140 (MQ=255) tCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGAGTATCCGGGAACCGTAATAACAAACAGCTCCGCTCACCTCAGGc > 2:1916410/1‑140 (MQ=255) tCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGGTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCTCACCTCAgga > 1:677634/1‑139 (MQ=255) tCAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCTCACCTCAGGc > 1:3723311/1‑140 (MQ=255) catttttttGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCTCACCTCAGGCa < 2:134866/137‑1 (MQ=255) cAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCTCACCTCAGGCa < 1:1306330/140‑1 (MQ=255) cAGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCTCACCTCAGGCa < 2:3723311/140‑1 (MQ=255) aGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCTCACCTCAGGCaa > 2:2216393/1‑139 (MQ=255) aGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCTCACCTCAGGCAt > 2:1089048/1‑140 (MQ=255) aGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGGATCCGGGAACCGAAATAACAAACAGCTCCGCTCACCTCAGGCAt > 2:3875866/1‑140 (MQ=255) aGTATTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGGCGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGACCCGTACTAACAAACAGCGCCGCTCACCGCAGGCAt > 2:3759970/1‑140 (MQ=255) | TTCTGCCTCGTTTTTGATGATGGAAAGCGTTTTGAAGAAGAGTGGCCTGTCAAAATAAACCGACTCGGGATTGGCAAAGCCATGAAGAGCATCAAATTGATAAATCTCCAAATTGGGATGCTGTTGTTCCCTCAGTTTTTTGATAAGAACCGCAACATCAAACGACGGTTCATATGAAGGGAAAAACAATAGGACCGGGCAGACTGGCACGTGATGAAGAGAATCGCGTATCCGGGAACCGTAATAACAAACAGCTCCGCTCACCTCAGGCATA > NZ_CP034943/451989‑452262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |