| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,993,028 | G→A | 6.4% | S211L (TCG→TTG) | walK ← | cell wall metabolism sensor histidine kinase WalK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,993,028 | 0 | G | A | 6.4% | 1255.4 / 47.8 | 375 | S211L (TCG→TTG) | walK | cell wall metabolism sensor histidine kinase WalK |
| Reads supporting (aligned to +/- strand): ref base G (125/226); new base A (8/16); total (133/242) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 378 total aligned reads displayed.
ATCGCCTGGGCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGACATCTTCCATACTCGCGAC > NZ_CP034943/3992890‑3993161 | aTCGCCTGGGCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGa > 2:91118/1‑140 (MQ=255)aTCGCCTGGGCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGa > 2:4078191/1‑140 (MQ=255)aTCGCCTGGGCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGa > 1:3047864/1‑140 (MQ=255)aTCGCCTGGGCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGa > 1:2997793/1‑140 (MQ=255) cTGGGCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCAAAAGCg < 1:2080985/140‑1 (MQ=255) tGGGCATCTTCAAGCTCTCTCTTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACATTCCACGAGAAATTACCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCgg < 2:1100394/140‑1 (MQ=255) tGGGCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGCGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCgg < 2:1483862/140‑1 (MQ=255) tGGGCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCgg < 2:2223167/140‑1 (MQ=255) tGGGCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCgg < 2:4156384/140‑1 (MQ=255) tGGGCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCgg < 1:4078191/140‑1 (MQ=255) tGGGCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCgg < 2:4223086/140‑1 (MQ=255) tGGGCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCgg < 2:652563/140‑1 (MQ=255) tGGGCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCgg < 1:2636208/140‑1 (MQ=255) tGGGCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCgg < 2:787076/140‑1 (MQ=255) tGGGCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCAAAAGCgg < 1:1714657/140‑1 (MQ=255) tGGGCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCAGGCCCGTACTTTTTACCCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCgg < 1:3693998/140‑1 (MQ=255) gggCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGa < 1:1428274/140‑1 (MQ=255) ggCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGag > 1:3507825/1‑139 (MQ=255) ggCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGAt > 2:1421475/1‑140 (MQ=255) ggCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGAt > 1:1264626/1‑140 (MQ=255) gCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATg < 2:765909/140‑1 (MQ=255) ttCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTaa < 2:547678/140‑1 (MQ=255) ttCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTaa < 1:1568348/140‑1 (MQ=255) ttCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTaa < 2:2732969/140‑1 (MQ=255) ttCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACGTTTTAACCGTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTaa < 2:4288878/140‑1 (MQ=255) tctcGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCgg > 1:1798920/1‑123 (MQ=255) tctcGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTg > 2:75051/1‑140 (MQ=255) tctcGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCGCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTg > 2:2945999/1‑140 (MQ=255) tctcGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCAAGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCACGCTCCATCGCCTGTTTTCTCATATCCGACAGCGGATCGGTAATGGTTCTTg > 2:2319526/1‑140 (MQ=255) tctcGTTAAGTGATTAAACGTAGTGGCAACCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTg > 1:2134761/1‑140 (MQ=255) ctcGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCgg > 2:1818088/1‑122 (MQ=255) ctcGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGc < 1:1003079/140‑1 (MQ=255) ctcGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCAAAAGCGGATGGGTAATGGTTCTTGc < 2:1864694/140‑1 (MQ=255) ctcGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCATTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGc > 1:3477282/1‑140 (MQ=255) cGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCa < 1:4304878/140‑1 (MQ=255) gATTACCCGTTGTGGCAAGCTGCCCAATTTCATCCTGCCCGAACTTTTTAACCGTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATa < 1:2227582/140‑1 (MQ=255) gATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATa < 2:3624742/140‑1 (MQ=255) gATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATa < 2:3966659/140‑1 (MQ=255) gATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCAAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATa < 1:919426/140‑1 (MQ=255) aTTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATAc > 1:754049/1‑140 (MQ=255) tAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAgg < 2:2105384/140‑1 (MQ=255) gTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGc > 2:3265974/1‑140 (MQ=255) aGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCaa > 2:1979031/1‑140 (MQ=255) gCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACa < 1:2559038/140‑1 (MQ=255) gCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACa < 1:1979031/140‑1 (MQ=255) gCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACa < 2:842830/140‑1 (MQ=255) gCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACa < 1:2886511/140‑1 (MQ=255) gCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCAGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACa < 1:855621/140‑1 (MQ=255) gCCCAATTTCATCATCCCCGTACTTTATAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACa < 1:2797665/140‑1 (MQ=255) cccAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCCGAAAAATACCGAGAAGGGCCGTCAAAACaa > 1:473260/1‑140 (MQ=255) cccAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCCGAAAAATACCGAGAAGGGCCGTCAAAACaa > 2:2278654/1‑140 (MQ=255) cccAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACac > 1:2293152/1‑139 (MQ=255) cccAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACaa > 2:3911922/1‑140 (MQ=255) aTTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGc < 1:3522707/140‑1 (MQ=255) aTTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGc < 1:3950126/140‑1 (MQ=255) catcatGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCaaa > 1:2475954/1‑140 (MQ=255) tcatGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAAcc > 1:3879579/1‑140 (MQ=255) tcatGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAAcc > 1:629083/1‑140 (MQ=255) tcatGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAAcc > 1:3248152/1‑140 (MQ=255) cccGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATg > 2:3743572/1‑78 (MQ=255) cccGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATg > 2:1597181/1‑78 (MQ=255) cccGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATg < 1:3743572/78‑1 (MQ=255) cGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAGAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCg < 1:4327741/140‑1 (MQ=255) cGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCg < 1:1843930/140‑1 (MQ=255) cGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCg < 1:715419/140‑1 (MQ=255) cGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCg < 1:1621375/140‑1 (MQ=255) tttttAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGc < 1:3164607/140‑1 (MQ=255) tttAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCa > 1:3355146/1‑140 (MQ=255) aCCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTAt < 1:798091/140‑1 (MQ=255) tCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCCAAACACGTGCCACACCTGGGCCGGATGCCAGTATCgtg > 2:439614/1‑140 (MQ=255) tCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTa < 1:1064022/135‑1 (MQ=255) tCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTa > 2:3679494/1‑135 (MQ=255) tCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCgtg > 1:415350/1‑140 (MQ=255) tCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCgtg > 1:518609/1‑140 (MQ=255) cGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCACAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGa < 1:2898545/140‑1 (MQ=255) cGAGAAAGTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGa < 1:1347794/140‑1 (MQ=255) aTTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCt < 1:3844355/140‑1 (MQ=255) aTTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCt < 1:4240063/140‑1 (MQ=255) cTTGCGCAAGCGCCAGCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCAtt < 2:3485007/140‑1 (MQ=255) cGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGt > 2:1324460/1‑140 (MQ=255) cGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGACGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGt < 2:3310832/140‑1 (MQ=255) gCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAg > 2:2994458/1‑140 (MQ=255) tCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGAc < 2:3894205/140‑1 (MQ=255) tCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGAc < 1:2923448/140‑1 (MQ=255) tCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGAc < 2:2036303/140‑1 (MQ=255) tCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGAc < 2:3199867/140‑1 (MQ=255) tCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGAc < 2:1627343/140‑1 (MQ=255) tCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGAc < 2:243570/140‑1 (MQ=255) tCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGAc < 2:177614/140‑1 (MQ=255) tCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCGGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGAc < 1:662938/140‑1 (MQ=255) tCCATCGCCTGTTTTCTCATATCCAAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGAc < 2:707604/140‑1 (MQ=255) aTCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTAGCGTGTTGATCGTCTTCATTTGGTTAAAGACATc > 2:2576128/1‑140 (MQ=255) tCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGACATCt > 2:1039885/1‑140 (MQ=255) ccTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGACATCTTcc > 1:2436372/1‑140 (MQ=255) tttCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGACATCTTCCATACt < 1:2352415/140‑1 (MQ=255) tttCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGACATCTTCCATACt < 1:1201614/140‑1 (MQ=255) tctcATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGACATCTTCCATACTcg < 1:977851/140‑1 (MQ=255) tcATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGACATCTTCCATACTcgcg < 2:1350729/140‑1 (MQ=255) cATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGACATCTTCCATACTCGCGa < 2:3047864/140‑1 (MQ=255) atatCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGACATCTTCCATACTCGCGac > 1:3645528/1‑140 (MQ=255) | ATCGCCTGGGCATCTTCAAGCTCTCTCGTTAAGTGATTAAACGTAGTGGCAAGCTGCCCAATTTCATCATGCCCGTACTTTTTAACCTTCCTCGAGAAATTCCCTTTCGCAAGCTCCATCGCCTGTTTTCTCATATCCGAAAGCGGATGGGTAATGGTTCTTGCCAGAAAAATACCGAGAAGGGCCGTCAAAACAAGTGCCAAACCTGTGCCGGATGCCAGTATCGTGTTGATCGTCTTCATTTGGTTAAAGACATCTTCCATACTCGCGAC > NZ_CP034943/3992890‑3993161 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |