| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,994,110 | C→G | 6.0% | V89L (GTC→CTC) | walR ← | cell wall metabolism DNA‑binding response regulator WalR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,994,110 | 0 | C | G | 6.0% | 1346.7 / 56.9 | 421 | V89L (GTC→CTC) | walR | cell wall metabolism DNA‑binding response regulator WalR |
| Reads supporting (aligned to +/- strand): ref base C (180/214); new base G (11/15); total (191/230) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 422 total aligned reads displayed.
ATTAGAGGACGGCTCTTCCTCCGCAGGCGCTGTTGTCAGCTGGCGGCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCATAATATCTAAAAGAATTAAATCAGGCTGAAGCTCTTCT > NZ_CP034943/3993976‑3994249 | agagGACGGCTCTTCCTCCGCAGGCGCTGTTGTCAGCTGGCGGCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCaa < 1:2415140/140‑1 (MQ=255) agagGACGGCTCTTCCTCCGAAGGAGCTGTTGTCAGCTGGCGGCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGTATGGTTTTGTAACATAGTCATCAGCACAGATTTCAAGCCCGATGACCTTTTCaa < 1:3128446/140‑1 (MQ=255) agGACGGCTCTTCCTCCGCAGGCGCTGTTGTCAGCTGGCGGCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAAtt > 2:3164893/1‑140 (MQ=255) aCGGCTCTTCCTCCGCAGGCGCTGTTGTCAGCTGGCGGCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCt > 2:2234619/1‑140 (MQ=255) aCGGCTCTTCCTCCGCAGGCGCTGTTGTCAGCTGGCGGCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCt > 2:3030461/1‑140 (MQ=255) ggCTCTTCCTCCGCAGGCGCTGTTGTCAGCTGGCGGCGCACGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGa > 1:998483/1‑140 (MQ=255) ggCTCTTCCTCCGCAGGCGCTGTTGTCAGCTGGCGGCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGa > 1:1092011/1‑140 (MQ=255) ggCTCTTCCTCCGCAGGCGCTGTTGTCAGCTGGCGGCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGa > 1:2242817/1‑140 (MQ=255) ctctTCCTCCGCAGGCGCTGTTGTCAGCTGGCGGCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAAt > 1:849248/1‑140 (MQ=255) ccGCAGGCGCTGTTGTCAGCTGGCGGCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGcc > 1:3612031/1‑140 (MQ=255) gCAGGCGCTGTTGTCAGCTGGCGGCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGt < 2:1048782/140‑1 (MQ=255) gCAGGCGCTGTTGTCAGCTGGCGGCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGt < 1:3347172/140‑1 (MQ=255) aGGCGCTGTGGTCAGCTGGCGGCGCAAGTTCGCTTTTACACGCGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGAGTCCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCa < 2:2385809/140‑1 (MQ=255) ggCGCTGTTGTCAGCTGGCGGCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAg > 2:1651043/1‑140 (MQ=255) gtCAGCTGGCGTCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGAt < 2:83200/140‑1 (MQ=255) gtCAGCTGGCGGCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGAt < 1:2342878/140‑1 (MQ=255) gtCAGCTGGCGGCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGAt < 2:3679674/140‑1 (MQ=255) gtCAGCTGGCGGCGCAAGTTCGATTTTACAAGTGCGAGGAGCTCGCGTGTTCTGAATGTTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGAt < 1:3225195/140‑1 (MQ=255) cTGGCGGCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGAGCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCa < 2:2113419/140‑1 (MQ=255) ggcggcGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCata < 2:2501708/140‑1 (MQ=255) gcggcgCAAGTTCGCTTTTCCACGTGCCAGGAGCTCGCGTGTGCTGAAGGGTTTTGTAACATAGGCATCAGAACCGATTTCACGCCCGATGCGCTTGTGAATTTCTGAATCCGTCGCCGTCAGCATAATGATCGGCatat > 1:381808/1‑140 (MQ=255) gcggcgCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCatat > 1:1297919/1‑140 (MQ=255) gcAGGTTCGCTTTTACACGCGCCAAGAGCTCGCGTGTGCTGAATGGTTTTGTGACATAGTCATCAGCACCGATTTCAAGCCCGATAACCTTGTCAATTTCTGAATCCTTAGCCGTCAGCATAATGATTGGCATATCGTAt < 2:2932207/140‑1 (MQ=255) gcAGGTTCGCTTTTACACGCGCCAAGAGCTCGCGTGTGCTGAATGGTTTTGTGACATAGTCATCAGCACCGATTTCAAGCCCGATAACCTTGTCAATTTCTGAATCCTTAGCCGTCAGCATAATGATTGGCATATCGTAt < 2:1279640/140‑1 (MQ=255) gcAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTAt < 2:311048/140‑1 (MQ=255) gcAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTAt < 2:430494/140‑1 (MQ=255) gcAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACAGAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTAt < 1:1609156/140‑1 (MQ=255) tCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTAtttcttt < 2:2558850/140‑1 (MQ=255) gCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATttctttct < 1:2795279/140‑1 (MQ=255) gCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATttctttct < 1:100247/140‑1 (MQ=255) ttACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACt < 2:3797072/140‑1 (MQ=255) gTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATACTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGAGCGGCATCTCGTATTTCTTTCTGACTTCACgg < 2:1121891/140‑1 (MQ=255) gCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCATCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCa < 1:2485586/140‑1 (MQ=255) gCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCa > 2:1496520/1‑140 (MQ=255) gCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCa < 2:3889670/140‑1 (MQ=255) gCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCa < 2:1213143/140‑1 (MQ=255) gCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCa > 1:4201109/1‑140 (MQ=255) gCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCa < 1:472454/140‑1 (MQ=255) gCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCa < 2:1747832/140‑1 (MQ=255) gCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCa > 1:3288858/1‑140 (MQ=255) gCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCa < 1:314684/140‑1 (MQ=255) gCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCa < 1:1421835/140‑1 (MQ=255) gCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCa < 1:2973226/140‑1 (MQ=255) gCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCa < 2:3551412/140‑1 (MQ=255) gCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCa < 1:228619/140‑1 (MQ=255) gCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCa < 1:1859616/140‑1 (MQ=255) gCCAGGAGCTCCCGTGTGCTGAATGGTTTTGTTACATCGTCATCACCACCGATTTCAAGCCCGATGAGCTTGTCAATTTCTGACTCCTTCGCCGTCATCATAATGATCGGCATATCGTATTTCTTTCTGAATTCACGGCa < 2:3733731/140‑1 (MQ=255) cTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCaa > 1:3763483/1‑140 (MQ=255) cTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCaa > 2:4165542/1‑140 (MQ=255) tCGCGTGTGCTGAATGGTTTTTTAACATAGTCATCAGCACCGATTTGAAGCCCGATGACCTTGTAAATTTCTGAATCCTTCGCCGTAAGCATAATGATAGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAac < 1:1526505/140‑1 (MQ=255) cgcgTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGAGCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCa < 1:904703/125‑1 (MQ=255) cgcgTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGAGCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCa > 2:904703/1‑125 (MQ=255) cgcgTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGAGCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCa < 1:3844357/130‑1 (MQ=255) cgcgTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGa < 2:690349/73‑1 (MQ=255) cgcgTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCa > 2:2963900/1‑130 (MQ=255) cgcgTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAaca > 1:816385/1‑140 (MQ=255) cgcgTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAaca > 2:1084226/1‑140 (MQ=255) cgcgTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAaca > 2:592876/1‑140 (MQ=255) cgcgTGTGCTGAATGGTGTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAaca > 2:474988/1‑140 (MQ=255) tgtgCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGt < 1:4082428/140‑1 (MQ=255) tgCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCt > 1:511027/1‑140 (MQ=255) tgCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCt > 1:374000/1‑140 (MQ=255) aaTGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTttatt > 1:1802158/1‑140 (MQ=255) aaTGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTttatt > 1:388685/1‑140 (MQ=255) gtttttGTAACATAGTCATCATCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTAAACACCGTCTTTATTAgg < 1:2749871/138‑1 (MQ=255) ggTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAgg < 1:282999/140‑1 (MQ=255) ggTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAgg < 1:2021627/140‑1 (MQ=255) ggTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAgg < 1:1653847/140‑1 (MQ=255) ggTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAgg < 1:1244042/140‑1 (MQ=255) ggTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAgg < 1:569400/140‑1 (MQ=255) ggTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAgg < 1:77175/140‑1 (MQ=255) ttttGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGaa > 1:1732854/1‑140 (MQ=255) ttttGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGaa > 1:3397318/1‑140 (MQ=255) ttttGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGaa > 1:691095/1‑140 (MQ=255) tGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATAGTTCAACACCGGCTTTATTAGGAAGCa > 2:1536801/1‑140 (MQ=255) tGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCa < 2:2674457/140‑1 (MQ=255) tAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCata > 1:292551/1‑140 (MQ=255) tAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGAATATCGTATTTCTTTATTAATTCACGGGATAATTAAAAAACTTCTTTATTAGGAAgatta < 2:3392184/140‑5 (MQ=255) tAGTCATCAGCACCGATTTCAAGCCCGATGAGCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCATAATATc > 1:1173330/1‑140 (MQ=255) tAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCaa > 1:366901/1‑112 (MQ=255) tAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCATAATATc > 2:192986/1‑140 (MQ=255) tAGTCACCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCATAATATc > 2:806353/1‑140 (MQ=255) catcaGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCATAATATCTaaa < 1:3534361/140‑1 (MQ=255) atcaGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGAt > 2:2804309/1‑66 (MQ=255) atcaGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTATGAAGCATAATATCTaaaa > 2:778566/1‑140 (MQ=255) atcaGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCATAATATCTaaaa > 1:3054323/1‑140 (MQ=255) atcaGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCATAATATCTaaaa > 1:213145/1‑140 (MQ=255) aGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCATAATATCTAAAAGaa > 2:3239836/1‑140 (MQ=255) aGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCATAATATCTAAAAGaa > 2:2049724/1‑140 (MQ=255) aGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGAATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCATAATATCTAAAAGaa < 1:3075424/140‑1 (MQ=255) aGCACCGATTTCAACCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCCTCTTTCTTAGGAAGCATAATATCTAAAAGaa > 2:4132610/1‑140 (MQ=255) aTTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAaca < 2:3299256/99‑1 (MQ=255) aTTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAaca > 1:3301693/1‑99 (MQ=255) aTTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCATAATATCTAAAAGAATTAAATc > 2:449291/1‑140 (MQ=255) aTTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCATAATATCTAAAAGAATTAAATc > 1:630540/1‑140 (MQ=255) gCCCGATGAGCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCATAATATCTAAAAGAATTAAATCAGGCTGa < 1:3468582/140‑1 (MQ=255) gCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCATAATATCTAAAAGAATTAAATCAGGCTGa < 2:351943/140‑1 (MQ=255) ccGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCATAATATCTAAAAGAATTAAATCAGGCTGAAg < 1:4163971/140‑1 (MQ=255) gATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCATAATATCTAAAAGAATTAAATCAGGCTGAAGct > 2:4072399/1‑140 (MQ=255) aTGAGCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCTACACCGTCTTTATTAGGAAGCATAATATCTAAAAGAATTAAATCAGGCTGTAGctc > 1:263550/1‑140 (MQ=255) | ATTAGAGGACGGCTCTTCCTCCGCAGGCGCTGTTGTCAGCTGGCGGCGCAAGTTCGCTTTTACACGTGCCAGGAGCTCGCGTGTGCTGAATGGTTTTGTAACATAGTCATCAGCACCGATTTCAAGCCCGATGACCTTGTCAATTTCTGAATCCTTCGCCGTCAGCATAATGATCGGCATATCGTATTTCTTTCTGACTTCACGGCATACTTCAACACCGTCTTTATTAGGAAGCATAATATCTAAAAGAATTAAATCAGGCTGAAGCTCTTCT > NZ_CP034943/3993976‑3994249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |