| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,996,851 | A→T | 9.0% | intergenic (‑157/+49) | purA ← / ← EO946_RS20530 | adenylosuccinate synthase/VOC family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,996,851 | 0 | A | T | 9.0% | 609.9 / 7.2 | 204 | intergenic (‑157/+49) | purA/EO946_RS20530 | adenylosuccinate synthase/VOC family protein |
| Reads supporting (aligned to +/- strand): ref base A (114/67); new base T (2/21); total (116/88) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.96e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 252 total aligned reads displayed.
AACCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGG > NZ_CP034943/3996712‑3996989 | acccTTTCAAAACGATTCTATACACACACATCAAGTTTATCAGTCAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATAAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 1:2212372/138‑1 (MQ=255)aaCCTTTCAACACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 2:1486604/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAACTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTACATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 2:550866/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCCTTCGTTTTACAAGCGTTTTCTCATCGCa < 2:685320/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 2:1731133/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 1:1200436/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 1:2236653/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 1:1290364/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 2:1266146/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 2:1306895/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 2:1646043/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 1:207348/140‑1 (MQ=255)aaCCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTCCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 2:73003/140‑1 (MQ=255) cTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa > 1:708189/1‑137 (MQ=255) cTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa < 2:829998/137‑1 (MQ=255) cTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa > 1:829998/1‑137 (MQ=255) ttCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAATCGTTTTCTCATCGCATTGTc > 2:2146761/1‑140 (MQ=255) ttCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTc > 1:2187228/1‑140 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCCGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 2:1817015/1‑140 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAATTTATTGTAAATCTATATTCGTTCGCTTACATTCTTTTTATAAGCGTTTTCTCACTGCTTTGTca > 2:3261116/1‑139 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATTTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 2:3712991/1‑140 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAGTCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGtac > 2:2024297/1‑138 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACCAGCGTTTTCTCATCGCATTGTca > 2:4077535/1‑139 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 2:3167687/1‑140 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 1:3145278/1‑140 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 1:2946451/1‑140 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 2:3879045/1‑140 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 2:2196606/1‑140 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTAGCTTCCATTCGTTTTACATGCGTTTTCTCATCGCATTGTcc > 2:4163795/1‑140 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAAGTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAATCGTTTTATAATCGCATTGTcc > 2:3526354/1‑140 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAAGTGTAAATCCGAACATTACATTAATGTAAATCAATATTCGTTCGCGTCCAGTCGTTTTACAAGCGTTTTCTCATCGCATTGtgc > 1:3656706/1‑138 (MQ=255) tCAAAACGATTCTATTCAAACAAATCAAGGTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATACGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTGCATTCGTTTTACAAGCGTTTTCTCATCGGATTGTcc > 1:2905090/1‑140 (MQ=255) ttCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCt > 2:4195836/1‑140 (MQ=255) ttaaaaaaaaTAAAGTTTATCATTGAAGAAACATAAAGTCAATTGTAAATCAGAAAATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTAAAAGGGTTTTATCATCGCATTGTCCTAAAAAGCTCGTGa < 2:3733304/137‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:179501/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:4195836/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 2:1108261/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:105133/140‑1 (MQ=255) aaacaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAAc > 2:2645303/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCCTTCGTGTTACAAGCGTTTTCTCAGCGCTGTGTGCGAAAAAGCTCGTGAAACtt > 2:2495757/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 2:2143480/1‑140 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 1:1250480/1‑140 (MQ=255) aaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCa > 2:1139446/1‑112 (MQ=255) tCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCTTCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATc > 1:3438696/1‑140 (MQ=255) tCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATc > 1:1125399/1‑140 (MQ=255) tCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATc > 1:2915112/1‑140 (MQ=255) tCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATc > 1:1517927/1‑140 (MQ=255) tCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATc > 1:3774873/1‑140 (MQ=255) tCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATc > 1:3810065/1‑140 (MQ=255) tATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAATCTCGTGAAACTTGTATCCTTTAGc > 2:2976895/1‑140 (MQ=255) aTCAGTGAAGAAACAGAAACTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCa < 2:3054580/140‑1 (MQ=255) tCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCAc > 1:4248658/1‑140 (MQ=255) aGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGa < 2:628761/140‑1 (MQ=255) gAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACt > 1:654837/1‑140 (MQ=255) gAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACt > 1:1704814/1‑140 (MQ=255) gAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACt > 1:440137/1‑140 (MQ=255) aaGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCATTTAGCACGAAAAAGAGTTAcgtc > 2:1954699/1‑137 (MQ=255) aaTTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGACAAAGAGTTACTTGCCTGa > 1:3025918/1‑140 (MQ=255) aaTTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGa < 2:2189718/140‑1 (MQ=255) ttGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGata > 2:844116/1‑140 (MQ=255) ttGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGata > 2:2332112/1‑140 (MQ=255) tGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGatat < 1:2650181/140‑1 (MQ=255) tGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGatat < 1:3167687/140‑1 (MQ=255) aTCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCtt > 1:2754163/1‑140 (MQ=255) aTCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCtt > 1:522382/1‑140 (MQ=255) gAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGt > 2:4002382/1‑140 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACCAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAACAAGAGTTACTTGCGTGATATCCCTTTTGTa > 1:3607759/1‑140 (MQ=255) aaCATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTa > 1:1864765/1‑140 (MQ=255) aattaaTGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATaa > 1:2378573/1‑140 (MQ=255) aattaaTGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATaa > 1:397004/1‑140 (MQ=255) aattaaTGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATaa > 1:1482725/1‑140 (MQ=255) aattaaTGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATaa > 2:44387/1‑140 (MQ=255) aaTTTAAATCATTATTCTTTCGCTTCCATTGGTTTTACATTCGTTTTCTCTTCGCATTGTCATAAAAAGTTCTTTAAACTTTTATCCTTTAGCACGAAAAATTGTTACTGGCCTTATTTCCCTTTTGTATTCAAAAacac < 2:1399985/140‑1 (MQ=255) aaTGAAAATCAACATTCGTTCGCGTCCAGTGGTTTTACAAGGGTTTTCTCATCTCATTGTCCTAAAAAGCTCGTGAAACTTTTATCATTTAGCACGAAAAAAAGTTACGTGCCTGATAGCCGTTTTGAAGTCATAAAAAc < 2:2405804/140‑1 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCTCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACTAAAAAGAGTTACTTGCGTGATATCCCTTTTGTATTCATAAAATCGa > 1:2731208/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 1:3351272/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 1:3996500/1‑140 (MQ=255) atatTCTTTCGTTTCAATTCGTTTTAAAAGCGTTTTATCATCGAATTTTAATAAAAAGCTCGTTAAACTTTTATCCTTTAGCACGAAAAAGAGTTAGTTGCCTGATATCCCTTTTTTATTCATAAAAACGACTCGCCAAc < 2:2572639/140‑1 (MQ=255) ggttcgCTTCATTTCTTTTTACAAGCTTTTTCTCTTCGATTTTTCCTAAAAAGCTCTTTAAAATTTTATCCTTGAGCACCAAAAATAGTTAGTTGCCTTATATCCTTTTTGTATTCTAAAAAACGACTCGCCAACCGTcc < 1:895373/139‑1 (MQ=255) cgttcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGa > 2:2540182/1‑100 (MQ=255) cgttcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGa < 1:2540173/100‑1 (MQ=255) cTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAGCAGTTCCTTGCCTGATATCCCTTTTGTATGAATAAAAACGACACGCCCACCGGCCGGagcg > 1:2564255/1‑137 (MQ=255) cTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCACCCGTCCGGATcc > 2:384232/1‑140 (MQ=255) ttttACAAGCTTTTTATAATCGCTTTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAGTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCa < 2:2946451/140‑1 (MQ=255) ttttAAAAGGTTTTTATCATCGATTTGTAATAAAAAGCTCGTCAAAATTTTATCCTTTCGCACGAAAAAGATTTATTTGCCTTATATCCATTTTGTATTAAAAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCa < 1:2830786/140‑1 (MQ=255) tttaACACGCGTTTTCTAATCGAATTGTCAAAAAAAGCTGGTGAAATTTTTATCCTTTCCCACAAAAATTTTTTAGTTGCCTGATATCCTTTTTGTATTCATCAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCa < 1:1806461/140‑1 (MQ=255) ttccAAGCGTTTTATAATCGCATTGTCCTAAAAAGCTCGTTAAACTTTTATCCTTTAGCACTAAAAAGATTTACTTGCCTGATATCCTTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACg < 2:935578/137‑1 (MQ=255) tACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACTAAAAAGAGTTAGTTGCCTGATAGCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGc < 2:3358966/140‑1 (MQ=255) ggtttttCTCATCGCTTTGTCATAAAAAGCTGGTGAAATTTTTATCCTTTAGCACTAAAAAGTGTTACTGGCGTGATAGCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCa < 2:522382/137‑1 (MQ=255) ggtttttCTAATCGATTTGTCATAAAAAGCGCGTTAAATTTTTAGCATTTAGCACAAAAAAGTGTTCCTTGCCTTATAGCCCTTTTTTATTAATAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCa < 1:1317133/137‑1 (MQ=255) gtttttCTCTTCTATTTTTCCTAAAACGCTCGTTAAAATTTTATCATTACGCACTAAAAAGTTTTAGTTGCGTTATATCCGTTTTTTATTCAAAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 1:2146761/138‑1 (MQ=255) gtttttCTCTTCGATTTGTCATAAAAAGCTCGTTAAAATTTTATCATTTAGCACCAAAAAGAGTTACTGGCTTCATATCCTTTTTGTTTTAAAAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 1:1412433/138‑1 (MQ=255) cattttCTCATCGAATTGGACTAAAAAGATCGTGAAAGTTTTATCATTTAGCACTAAAAAGAGTTACTTGCCTGTGACCCCTTGTGTTTGCATAAAAACGACTCGCGAACCGTCCGGATCCTCTATCGTCCCGCCTCCAt < 2:2840064/138‑1 (MQ=255) tttCTCATGGCATTGTCATAAAAAGCTCGTGAAAATTTTAGCCTTTCGCAAGAAAAAGAGTTACTGGCTTTATCACCCTTTTGTATGCAAAAAAACGACTCGCCAACCGTCAGGATCCTCTATCGTCCCGCCTCTATGGc < 2:273940/140‑1 (MQ=255) tttCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGc < 2:1843052/140‑1 (MQ=255) tgtctaATCGAATTGTCCTAAAAAGCTCGTCAAACTTTTATCCTTTAGAACTAAAAAGTGTTAGTGGCCTGATATCCCTTTTTTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGc < 2:1162501/138‑1 (MQ=255) tctcATCGCATTGTCCTAAAAAGCCCGCGAAACTTTTATCCTTTAGCACCAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTc < 2:2250607/140‑1 (MQ=255) tCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTa > 2:261864/1‑140 (MQ=255) gCATTGTCCTAAAAAGCTCTTCAAACTTTTATCCTTTCGCACCAAAAAGAGTTACTGGCCTTATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACg < 2:1367602/140‑1 (MQ=255) cATTGTCATAAACAGCTCGTCAAACTTTTATCGTGTAGCACGAAAAAGAGTTAGTTGCCTGATAGCCCTTTTTTTTTCAAAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACgg < 2:1558982/140‑1 (MQ=255) | AACCTTTCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTACTTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGG > NZ_CP034943/3996712‑3996989 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |