BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	1,902,254	A→G	5.6%	F13F (TTT→TTC)	EO946_RS09605 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	1,902,254	0	A	G	5.6%	344.6 / 7.4	107	F13F (TTT→TTC)	EO946_RS09605	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (27/74); new base G (3/3); total (30/77)
Fisher's exact test for biased strand distribution p-value = 3.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.52e-01

Only 100 of 107 total aligned reads displayed.

TGGATTTCTTCTCATCATCTGCATTTTGGCCGGCTTTCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATTTATT  >  NZ_CP034943/1902118‑1902372

tGGATTTCTTCTCATCATCTGCATTTTGGCCGGCTTTCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAAt                                                                                                                     <  1:1387429/140‑1 (MQ=255)

     ttcttcTCATCATCTGCATTTTGGCCGGCTTTCAACTCATGCATTTCCTGATGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGAt                                                                                                                >  2:699436/1‑140 (MQ=255)

       cttctCATCATCTGCATTTTGGCCGGCTTTCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATgg                                                                                                              >  2:86412/1‑140 (MQ=255)

       cttctCATCATCTGCATTTTGGCCGGCTTTCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATgg                                                                                                              <  2:1026816/140‑1 (MQ=255)

       cttctCATCATCTGCATTTTGGCCGGCTTTCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATgg                                                                                                              >  2:647306/1‑140 (MQ=255)

        ttctCATCATCTGCATTTTGGCCGGCTTTCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAATACTGGCAATCGCCAAAAATAAGATGGa                                                                                                             <  2:1396396/140‑1 (MQ=255)

        ttctCATCATCTGCATTTTGGCCGGCTTTCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGa                                                                                                             <  1:1770005/140‑1 (MQ=255)

        ttctCATCATCTGCATTTTGGCCGGCTTTCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGa                                                                                                             <  2:558854/140‑1 (MQ=255)

        ttctCATCATCTGCATTTTGGCCGGCTTTCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGa                                                                                                             <  1:694211/140‑1 (MQ=255)

        ttctCATCATCTGCATTTTGGCCGGCTTTCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGa                                                                                                             <  2:2375252/140‑1 (MQ=255)

        ttctCATCATCTGCATTTTGGCCGGCTTTCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGa                                                                                                             <  1:783239/140‑1 (MQ=255)

        ttctCATCATCTGCATTTTGGCCGGCTTTCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGa                                                                                                             <  2:1386702/140‑1 (MQ=255)

        ttctCATCATCTGCATTTTGGCCGGCTTTCAACTCATGCATGTCCTGCTGGTCGGCTACGGCTTTATATTGATGGCCGATATCTAAGGCGTGGGGAATGGAGAACAAATGTAAACTGTCTATCGCCAAAAATAAGATGGa                                                                                                             <  2:2051587/140‑1 (MQ=255)

            catcatCTGCATTTTGGCCGGCTTTCAACTCATGCATTTCCTGCGGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCt                                                                                                         <  2:2103643/140‑1 (MQ=255)

             atcatcTGCATTTTGGCCGGCTTTCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCtt                                                                                                        >  1:1748174/1‑140 (MQ=255)

                     cATTTTGGCCGGCTTTCAACTCATGCATATACTGCAGGTCGGCTACGGCATTAAAATGATGGCCGATAGCAAATGAGTTGGGAATGGACAACAAATGAAATCTGTCAATCGCCAAAAATAATATGGACCCTTAAACTATc                                                                                                >  1:1975890/1‑140 (MQ=255)

                                    tCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCaaa                                                                                 <  1:1549221/140‑1 (MQ=255)

                                     cAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAAt                                                                                <  1:1674861/140‑1 (MQ=255)

                                           aTGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATTGAGAACAAATGAAAACTGGCAATCGCCAAGAATAAGATGGATGCTTTCAATATCGTTACTTTTTTCAAATGAtctc                                                                          >  2:1912350/1‑140 (MQ=255)

                                           aTGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATTGAGAACAAATGAAAACTGGCAATCGCCAAGAATAAGATGGATGCTTTCAATATCGTTACTTTTTTCAAATGAtctc                                                                          >  2:1912854/1‑140 (MQ=255)

                                           aTGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATTGAGAACAAATGAAAACTGGCAATCGCCAAGAATAAGATGGATGCTTTCAATATCGTTACTTTTTTCAAATGAtctc                                                                          >  2:1912873/1‑140 (MQ=255)

                                           aTGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGAtctc                                                                          >  2:2186738/1‑140 (MQ=255)

                                              gaTTTCCTGCTTGTAGGCTACGGGTTTATAATGATGGCAGATATAAATGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                       <  2:2374749/139‑1 (MQ=255)

                                              cATTTCCTGCTGGTCGGCTACGGCTTTATAATGCTGGCCGATATCACAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAACTACCCTGGACGCTTTAAGTACCGTTACTTTTTTCAAATGATCTcccc                                                                       <  1:936570/140‑1 (MQ=255)

                                              cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATTGAGAACAAATGAAAACTGGCAATCGCCAAGAATAAGATGGATGCTTTCAATATCGTTACTTTTTTCAAATGATCTcccc                                                                       <  1:1912873/140‑1 (MQ=255)

                                              cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATTGAGAACAAATGAAAACTGGCAATCGCCAAGAATAAGATGGATGCTTTCAATATCGTTACTTTTTTCAAATGATCTcccc                                                                       <  1:1912854/140‑1 (MQ=255)

                                              cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATTGAGAACAAATGAAAACTGGCAATCGCCAAGAATAAGATGGATGCTTTCAATATCGTTACTTTTTTCAAATGATCTcccc                                                                       <  1:1912350/140‑1 (MQ=255)

                                              cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                       <  1:699436/140‑1 (MQ=255)

                                              cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                       <  2:1636907/140‑1 (MQ=255)

                                              cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                       <  2:2399948/140‑1 (MQ=255)

                                              cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                       <  1:641000/140‑1 (MQ=255)

                                              cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                       <  1:517551/140‑1 (MQ=255)

                                              cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                       <  2:968470/140‑1 (MQ=255)

                                              cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                       <  2:828880/140‑1 (MQ=255)

                                              cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                       <  1:1404047/140‑1 (MQ=255)

                                              cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                       <  1:2025425/140‑1 (MQ=255)

                                              cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                       <  1:2066478/140‑1 (MQ=255)

                                              cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAACGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                       <  2:562030/140‑1 (MQ=255)

                                              cATTTACTGCTTGTCGGCTACGGCTTTATCATGATGGCCGATATCACAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTATTTTCAAATGATCTcccc                                                                       <  1:606098/140‑1 (MQ=255)

                                               ctttCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTccccc                                                                      <  1:3092/139‑1 (MQ=255)

                                                   ccTGCTGGTCGGCTACGGCTTTATAATGCTGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                       <  1:1377207/135‑1 (MQ=255)

                                                   ccTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                       >  2:1377207/1‑135 (MQ=255)

                                                    ctggtgGTCGGCTAGGGCTTTATTATGTTGGCCGATATCAAAGGCGTGTTTAATGGAGAACAAATGAAATCTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCtt                                                                 <  2:2299097/140‑1 (MQ=255)

                                                    ctgctgGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCtt                                                                 <  2:769618/140‑1 (MQ=255)

                                                      gctgGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTa                                                               >  1:389264/1‑140 (MQ=255)

                                                         ggTCGGCTACGGCTTTATAATGCTGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAata                                                            <  1:2145586/140‑1 (MQ=255)

                                                         ggTCGGCTACGGCTTTATAATGATGGCCGATATCAACGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAata                                                            <  1:1916954/140‑1 (MQ=255)

                                                         ggTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACACATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAata                                                            <  2:2053461/140‑1 (MQ=255)

                                                         ggTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAata                                                            <  1:51538/140‑1 (MQ=255)

                                                         ggTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAata                                                            <  2:131903/140‑1 (MQ=255)

                                                         ggTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAata                                                            <  1:1565179/140‑1 (MQ=255)

                                                         ggTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAata                                                            <  1:1916524/140‑1 (MQ=255)

                                                         ggTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAata                                                            <  1:1916918/140‑1 (MQ=255)

                                                          gTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                       >  1:842250/1‑128 (MQ=255)

                                                          gTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                       <  2:842250/128‑1 (MQ=255)

                                                          gTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAatat                                                           >  1:23324/1‑140 (MQ=255)

                                                            cGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTa                                                         <  2:389264/140‑1 (MQ=255)

                                                             ggCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTAc                                                        >  2:1157185/1‑140 (MQ=255)

                                                                 aCGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGaa                                                    <  2:604763/140‑1 (MQ=255)

                                                                 aCGGATTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGaa                                                    <  2:1596033/140‑1 (MQ=255)

                                                                  cGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATCAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAat                                                   <  2:657097/140‑1 (MQ=255)

                                                                         ataATGCTCGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTta                                            <  2:1294250/140‑1 (MQ=255)

                                                                         ataATGATGGCCGATATCACAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTta                                            <  1:1908/140‑1 (MQ=255)

                                                                         ataATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTTCTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTta                                            <  2:2365535/140‑1 (MQ=255)

                                                                         ataATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTta                                            <  2:1910979/140‑1 (MQ=255)

                                                                         ataATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTta                                            <  2:1060859/140‑1 (MQ=255)

                                                                         ataATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTta                                            <  1:647306/140‑1 (MQ=255)

                                                                         ataATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTta                                            <  2:1614640/140‑1 (MQ=255)

                                                                         ataATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTta                                            <  1:86412/140‑1 (MQ=255)

                                                                              gatgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                       <  2:1994504/140‑1 (MQ=255)

                                                                              gatgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                       <  2:23324/140‑1 (MQ=255)

                                                                               atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCcctcc                                                                   <  2:1472299/111‑1 (MQ=255)

                                                                               atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCcctcc                                                                   >  1:1472299/1‑111 (MQ=255)

                                                                               atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataa                                      <  1:761533/140‑1 (MQ=255)

                                                                               atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataa                                      >  1:1160187/1‑140 (MQ=255)

                                                                               atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataa                                      <  1:118238/140‑1 (MQ=255)

                                                                               atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataa                                      <  1:2111993/140‑1 (MQ=255)

                                                                               atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataa                                      <  1:427454/140‑1 (MQ=255)

                                                                               atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataa                                      >  2:305596/1‑140 (MQ=255)

                                                                               atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataa                                      <  1:749781/140‑1 (MQ=255)

                                                                               atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                       >  1:1004398/1‑139 (MQ=255)

                                                                               atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                       <  2:1004398/139‑1 (MQ=255)

                                                                               atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                       >  1:1117997/1‑139 (MQ=255)

                                                                               atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                       <  2:1298850/139‑1 (MQ=255)

                                                                               atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                       >  1:1295724/1‑139 (MQ=255)

                                                                               atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                       <  2:1117997/139‑1 (MQ=255)

                                                                               atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                       >  1:1298850/1‑139 (MQ=255)

                                                                               atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                       <  2:1295724/139‑1 (MQ=255)

                                                                                 ggCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataata                                    >  2:2028440/1‑140 (MQ=255)

                                                                                    cGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCcctcc                                                                   >  1:1097348/1‑106 (MQ=255)

                                                                                    cGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCcctcc                                                                   <  2:1097348/106‑1 (MQ=255)

                                                                                    cGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCcctcc                                                                   <  2:2171812/106‑1 (MQ=255)

                                                                                           aaaGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCa                          <  1:1157185/140‑1 (MQ=255)

                                                                                               gCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCt                      <  1:305596/140‑1 (MQ=255)

                                                                                                 gTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTaa                    >  2:2169147/1‑140 (MQ=255)

                                                                                                   ggggAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                       >  2:47306/1‑119 (MQ=255)

                                                                                                   ggggAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                       <  1:47306/119‑1 (MQ=255)

                                                                                                         tGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAAc            >  2:202882/1‑140 (MQ=255)

                                                                                                         tGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAAc            >  2:135883/1‑140 (MQ=255)

                                                                                                                   aTGAAAACTGGCAATCCCCAAAAATCAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATttatt  <  2:2109717/140‑1 (MQ=255)

TGGATTTCTTCTCATCATCTGCATTTTGGCCGGCTTTCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATTTATT  >  NZ_CP034943/1902118‑1902372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`