BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	1,902,272	A→C	5.6%	L7L (CTT→CTG) ‡	EO946_RS09605 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	1,902,272	0	A	C	5.6%	344.1 / 6.9	107	L7L (CTT→CTG) ‡	EO946_RS09605	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (23/78); new base C (3/3); total (26/81)
Fisher's exact test for biased strand distribution p-value = 1.53e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.14e-01

Only 100 of 107 total aligned reads displayed.

CATTTTGGCCGGCTTTCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACTTTGTTAAGTATA  >  NZ_CP034943/1902139‑1902406

cATTTTGGCCGGCTTTCAACTCATGCATATACTGCAGGTCGGCTACGGCATTAAAATGATGGCCGATAGCAAATGAGTTGGGAATGGACAACAAATGAAATCTGTCAATCGCCAAAAATAATATGGACCCTTAAACTATc                                                                                                                                  >  1:1975890/1‑140 (MQ=255)

               tCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCaaa                                                                                                                   <  1:1549221/140‑1 (MQ=255)

                cAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAAt                                                                                                                  <  1:1674861/140‑1 (MQ=255)

                      aTGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATTGAGAACAAATGAAAACTGGCAATCGCCAAGAATAAGATGGATGCTTTCAATATCGTTACTTTTTTCAAATGAtctc                                                                                                            >  2:1912873/1‑140 (MQ=255)

                      aTGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATTGAGAACAAATGAAAACTGGCAATCGCCAAGAATAAGATGGATGCTTTCAATATCGTTACTTTTTTCAAATGAtctc                                                                                                            >  2:1912854/1‑140 (MQ=255)

                      aTGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGAtctc                                                                                                            >  2:2186738/1‑140 (MQ=255)

                      aTGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGAtctc                                                                                                            >  2:1345215/1‑140 (MQ=255)

                         cATTTCCTGCTGGTCGGCTACGGCTTTATAATGCTGGCCGATATCACAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAACTACCCTGGACGCTTTAAGTACCGTTACTTTTTTCAAATGATCTcccc                                                                                                         <  1:936570/140‑1 (MQ=255)

                         cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATTGAGAACAAATGAAAACTGGCAATCGCCAAGAATAAGATGGATGCTTTCAATATCGTTACTTTTTTCAAATGATCTcccc                                                                                                         <  1:1912350/140‑1 (MQ=255)

                         cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATTGAGAACAAATGAAAACTGGCAATCGCCAAGAATAAGATGGATGCTTTCAATATCGTTACTTTTTTCAAATGATCTcccc                                                                                                         <  1:1912854/140‑1 (MQ=255)

                         cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATTGAGAACAAATGAAAACTGGCAATCGCCAAGAATAAGATGGATGCTTTCAATATCGTTACTTTTTTCAAATGATCTcccc                                                                                                         <  1:1912873/140‑1 (MQ=255)

                         cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                                                         <  1:2025425/140‑1 (MQ=255)

                         cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                                                         <  1:1404047/140‑1 (MQ=255)

                         cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                                                         <  1:517551/140‑1 (MQ=255)

                         cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                                                         <  2:2399948/140‑1 (MQ=255)

                         cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                                                         <  1:699436/140‑1 (MQ=255)

                         cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                                                         <  2:1636907/140‑1 (MQ=255)

                         cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                                                         <  2:828880/140‑1 (MQ=255)

                         cATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAACGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                                                         <  2:562030/140‑1 (MQ=255)

                         cATTTACTGCTTGTCGGCTACGGCTTTATCATGATGGCCGATATCACAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTATTTTCAAATGATCTcccc                                                                                                         <  1:606098/140‑1 (MQ=255)

                          ctttCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTccccc                                                                                                        <  1:3092/139‑1 (MQ=255)

                              ccTGCTGGTCGGCTACGGCTTTATAATGCTGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                                                         <  1:1377207/135‑1 (MQ=255)

                              ccTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                                                         >  2:1377207/1‑135 (MQ=255)

                               ctggtgGTCGGCTAGGGCTTTATTATGTTGGCCGATATCAAAGGCGTGTTTAATGGAGAACAAATGAAATCTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCtt                                                                                                   <  2:2299097/140‑1 (MQ=255)

                               ctgctgGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCtt                                                                                                   <  2:769618/140‑1 (MQ=255)

                                 gctgGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTa                                                                                                 >  1:389264/1‑140 (MQ=255)

                                    ggTCGGCTACGGCTTTATAATGCTGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAata                                                                                              <  1:2145586/140‑1 (MQ=255)

                                    ggTCGGCTACGGCTTTATAATGATGGCCGATATCAACGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAata                                                                                              <  1:1916954/140‑1 (MQ=255)

                                    ggTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACACATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAata                                                                                              <  2:2053461/140‑1 (MQ=255)

                                    ggTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAata                                                                                              <  1:51538/140‑1 (MQ=255)

                                    ggTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAata                                                                                              <  1:1916524/140‑1 (MQ=255)

                                    ggTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAata                                                                                              <  1:1916918/140‑1 (MQ=255)

                                    ggTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAata                                                                                              <  2:131903/140‑1 (MQ=255)

                                     gTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                                                         >  1:842250/1‑128 (MQ=255)

                                     gTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTcccc                                                                                                         <  2:842250/128‑1 (MQ=255)

                                     gTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAatat                                                                                             >  1:23324/1‑140 (MQ=255)

                                       cGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTa                                                                                           <  2:389264/140‑1 (MQ=255)

                                        ggCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTAc                                                                                          >  2:1157185/1‑140 (MQ=255)

                                            aCGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGaa                                                                                      <  2:604763/140‑1 (MQ=255)

                                            aCGGATTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGaa                                                                                      <  2:1596033/140‑1 (MQ=255)

                                             cGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATCAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAat                                                                                     <  2:657097/140‑1 (MQ=255)

                                                    ataATGCTCGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTta                                                                              <  2:1294250/140‑1 (MQ=255)

                                                    ataATGATGGCCGATATCACAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTta                                                                              <  1:1908/140‑1 (MQ=255)

                                                    ataATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTTCTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTta                                                                              <  2:2365535/140‑1 (MQ=255)

                                                    ataATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTta                                                                              <  2:1614640/140‑1 (MQ=255)

                                                    ataATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTta                                                                              <  2:1910979/140‑1 (MQ=255)

                                                    ataATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTta                                                                              <  2:248913/140‑1 (MQ=255)

                                                    ataATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTta                                                                              <  2:1060859/140‑1 (MQ=255)

                                                    ataATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTta                                                                              <  1:86412/140‑1 (MQ=255)

                                                    ataATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTta                                                                              <  1:647306/140‑1 (MQ=255)

                                                         gatgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                                                         <  2:1994504/140‑1 (MQ=255)

                                                         gatgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                                                         <  2:23324/140‑1 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCcctcc                                                                                                     <  2:1472299/111‑1 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCcctcc                                                                                                     >  1:1472299/1‑111 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataa                                                                        <  1:749781/140‑1 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataa                                                                        <  1:427454/140‑1 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataa                                                                        <  1:2111993/140‑1 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataa                                                                        <  1:1731832/140‑1 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataa                                                                        <  1:749883/140‑1 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataa                                                                        >  2:305596/1‑140 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataa                                                                        <  1:118238/140‑1 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataa                                                                        >  1:1160187/1‑140 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataa                                                                        <  1:761533/140‑1 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                                                         >  1:1004398/1‑139 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                                                         >  1:1298850/1‑139 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                                                         >  1:1295724/1‑139 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                                                         >  1:1117997/1‑139 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                                                         <  2:1004398/139‑1 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                                                         <  2:1295724/139‑1 (MQ=255)

                                                          atgGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                                                         <  2:1298850/139‑1 (MQ=255)

                                                            ggCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataata                                                                      >  2:2028468/1‑140 (MQ=255)

                                                            ggCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataataata                                                                      >  2:2028440/1‑140 (MQ=255)

                                                               cGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCcctcc                                                                                                     >  1:1097348/1‑106 (MQ=255)

                                                               cGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCcctcc                                                                                                     <  2:1097348/106‑1 (MQ=255)

                                                               cGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCcctcc                                                                                                     <  2:2171812/106‑1 (MQ=255)

                                                               cGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCcctcc                                                                                                     >  1:2171812/1‑106 (MQ=255)

                                                                      aaaGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCa                                                            <  1:1157185/140‑1 (MQ=255)

                                                                          gCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCt                                                        <  1:305596/140‑1 (MQ=255)

                                                                            gTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTaa                                                      >  2:2169147/1‑140 (MQ=255)

                                                                              ggggAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                                                         <  1:47306/119‑1 (MQ=255)

                                                                              ggggAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTataata                                                                         >  2:47306/1‑119 (MQ=255)

                                                                                    tGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAAc                                              >  2:202882/1‑140 (MQ=255)

                                                                                    tGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAAc                                              >  2:135883/1‑140 (MQ=255)

                                                                                              aTGAAAACTGGCAATCCCCAAAAATCAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATttatt                                    <  2:2109717/140‑1 (MQ=255)

                                                                                                                    aataccaTGGACGCTTTAAGTATCGTTACTTTTTTCATATGATATCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTCATCCACCCTAACAGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACt              <  1:519249/134‑1 (MQ=255)

                                                                                                                         gATTGACGCTTTAAGTATCTTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAACAGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACTTTGtt         <  1:1361076/140‑1 (MQ=255)

                                                                                                                         gATGGACGCTTTAATTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACTTTGtt         <  2:264841/140‑1 (MQ=255)

                                                                                                                         gATGGACGCTTTAAGTATCGTTAGTTTTTTAAAATGATCTCCCCGTCCTTTATTATTACTGAATATTTTTATTATAATAACCTAATCCACCCTAACTGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACTTTGtt         <  2:1194021/140‑1 (MQ=255)

                                                                                                                         gATGGACGCTTTAAGTATCGTTACTTTTTTCTAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACTTTGtt         <  1:1774776/140‑1 (MQ=255)

                                                                                                                         gATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACTTTGtt         <  1:812335/140‑1 (MQ=255)

                                                                                                                         gATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACTTTGtt         <  1:1134397/140‑1 (MQ=255)

                                                                                                                         gATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACTTTGtt         <  2:628076/140‑1 (MQ=255)

                                                                                                                         gATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACTTTGtt         <  1:1863554/140‑1 (MQ=255)

                                                                                                                         gATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACTTTGtt         <  2:1013020/140‑1 (MQ=255)

                                                                                                                         gATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACTTTGtt         <  2:1046678/140‑1 (MQ=255)

                                                                                                                         gATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACTTTGtt         <  2:2375152/140‑1 (MQ=255)

                                                                                                                         gATGGACGCTTTAAGTATAGTTAATTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACTTTGtt         <  2:1046115/140‑1 (MQ=255)

                                                                                                                                gCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACTTTGTTAAGtata  <  1:135883/140‑1 (MQ=255)

                                                                                                                                gCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACTTTGTTAAGtata  <  1:202882/140‑1 (MQ=255)

                                                                                                                                gCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACTTTGTTAAGtata  <  1:616402/140‑1 (MQ=255)

CATTTTGGCCGGCTTTCAACTCATGCATTTCCTGCTGGTCGGCTACGGCTTTATAATGATGGCCGATATCAAAGGCGTGGGGAATGGAGAACAAATGAAAACTGGCAATCGCCAAAAATAAGATGGACGCTTTAAGTATCGTTACTTTTTTCAAATGATCTCCCCCTCCTTTAATATTACTGAATATTTTTATAATAATACCCTAATCCACCCTAAAAGTAAACCTGATTTATTAAATTTAAAAATAAATTTCACTTTGTTAAGTATA  >  NZ_CP034943/1902139‑1902406

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`