| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,180,184 | T→C | 6.8% | D18D (GAT→GAC) | sspL → | small, acid‑soluble spore protein L |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,180,184 | 0 | T | C | 6.8% | 318.3 / 10.2 | 103 | D18D (GAT→GAC) | sspL | small, acid‑soluble spore protein L |
| Reads supporting (aligned to +/- strand): ref base T (25/71); new base C (4/3); total (29/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.57e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.68e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
ATCATCTGGCAAAAGAAGCGATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTACACGATCTCTCTAGCGTTCAGCTTTTCAAGCATGCGCTCAATTCCTTTGATTTG > NZ_CP034943/2180047‑2180323 | atcatcTGGCAAAAGAAGCGATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCt > 2:1936098/1‑140 (MQ=255) tcatcTGGCAAAAGAAGCGATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTg < 2:19090/140‑1 (MQ=255) atcTGGCAAAATAAGCGATTCGGCTGAATGATCACAATGAAATCTCGATAAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATGTGGa < 2:2434211/140‑1 (MQ=255) atcTGGCAAAAGAAGCGATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGa < 2:724462/140‑1 (MQ=255) atcTGGCAAAAGAAGCGATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGa < 2:1987383/140‑1 (MQ=255) atcTGGCAAAAGAAGCGATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGa < 1:1372171/140‑1 (MQ=255) atcTGGCAAAAGAAGCGATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGa < 1:1994658/140‑1 (MQ=255) atcTGGAAAAAGAAGCGATTCGGATGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGa < 2:2251147/140‑1 (MQ=255) tcTGGCAAAAGAAGCGATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGaa < 2:424706/140‑1 (MQ=255) ggCAAAAGAAGCGATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGc < 2:679984/140‑1 (MQ=255) aaaGAAGCGATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATa < 2:95462/140‑1 (MQ=255) aaaGAAGCGATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATa < 2:569406/140‑1 (MQ=255) aaaGAAGCGATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATa < 1:824814/140‑1 (MQ=255) aagCGATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGACGGCTGACCGGCGGTGTTACTCCGCAATGCGATCTGGAAGGCAATAcaca > 1:1016812/1‑140 (MQ=255) taTTCGGCTGAATGATAAGACTGAAATCTCGAACAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAATATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAAt < 2:1946420/139‑1 (MQ=255) gATTCGGCTTAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAAt < 2:754103/140‑1 (MQ=255) gATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAAt < 2:445870/140‑1 (MQ=255) gATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAAt < 2:164128/140‑1 (MQ=255) gATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAAt < 2:1410130/140‑1 (MQ=255) gATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAAt < 2:1288195/140‑1 (MQ=255) gATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAAt < 1:943677/140‑1 (MQ=255) gATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAAt < 1:461470/140‑1 (MQ=255) gATTAGGCTGAATGATAAGAATGAAATCTCTATCAATTGTAATCCTACTGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTTTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAAt < 2:462599/140‑1 (MQ=255) ttCGGCTTAATGATAAGAATGAAATCTCGATCAATGGACATCCTAATGACGATGTGTACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGa < 2:1026991/140‑1 (MQ=255) ttCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGa < 1:1113543/140‑1 (MQ=255) ttCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGa < 2:1658861/140‑1 (MQ=255) ttCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGa < 2:108152/140‑1 (MQ=255) ttCGGCTGAATCATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGa < 2:2374723/140‑1 (MQ=255) ggCTGAATGATCAGAATTAAATCTCGATAAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGAccc < 2:1589413/140‑1 (MQ=255) ggCTGAATGATAAGACTGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGAccc < 1:2370733/140‑1 (MQ=255) ggCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGAccc < 2:2254782/140‑1 (MQ=255) tGATAAGAATTAAATCTCGATCAATTTTCATCCTAATGACGAGGTGAAAAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGAAATGCGATCTGGAAGGCAATACACATAATGACACTaaaaaa > 2:1663686/1‑138 (MQ=255) tGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACa < 1:1106939/140‑1 (MQ=255) tGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACa < 1:959174/140‑1 (MQ=255) agATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGCTTAACATACATGAAATAGAAAGATAAAGGCCGGCTGACCGGCGTTGTTACTGCGGAAGGCGATCTGGAAGGCTATACACATTATGACCCTAAAACa < 2:1122604/139‑1 (MQ=255) gATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGTTAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACag < 1:1187859/140‑1 (MQ=255) gATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACag < 1:2150869/140‑1 (MQ=255) aaTCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCaa < 1:2089940/106‑1 (MQ=255) tagATCAATGGTCATCCTAATGACGATGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAagag < 2:2246706/138‑1 (MQ=255) cAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCaaa < 2:1950828/140‑1 (MQ=255) cAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCaaa < 1:1773441/140‑1 (MQ=255) cAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCaaa < 2:382249/140‑1 (MQ=255) cAATGGTCATCATAATGACGAGTTGAACAAACATGAAAAAGAAAGATAAATGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCaaa < 2:1950837/140‑1 (MQ=255) tGGTCATCCTAATGACGATGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGATGGCAATACACATAATGACCCTATAACAGAGCTTGAAGAAAGAGCCaaaaaa < 1:1188285/140‑1 (MQ=255) gTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAg < 1:813589/140‑1 (MQ=255) tCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAAt > 2:617742/1‑140 (MQ=255) tAATGACGAGGTGAACAAACATGAAAAAGAAAGATTAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACa < 2:650435/140‑1 (MQ=255) aaTGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAACACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACaa < 2:583626/140‑1 (MQ=255) aaTGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACaa < 2:37935/140‑1 (MQ=255) aaTGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACaa < 2:193579/140‑1 (MQ=255) aaTGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACaa < 2:1774419/140‑1 (MQ=255) aaTGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACaa < 2:1570290/140‑1 (MQ=255) aaTGACGAGGTGAACAAAAATGAAAAAGAAATATAAAGGCCGGCTGACCGTCTGTGTTACTCCTCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGGTTGAAGAAAGAGCCAAAAAAAGCAATACaa < 2:1680433/140‑1 (MQ=255) aCGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACg < 1:881276/140‑1 (MQ=255) aCGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACg < 1:1599049/140‑1 (MQ=255) aGGTGAACTAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGACCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAGGAGAGAGCAAAAAAAAGCAATACAAAACGCTa > 1:1391420/1‑140 (MQ=255) aGGTGAACTAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGACCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAGGAGAGAGCAAAAAAAAGCAATACAAAACGCTa > 1:556730/1‑140 (MQ=255) aGGTGAACTAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGACCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAGGAGAGAGCAAAAAAAAGCAATACAAAACGCTa > 1:1391497/1‑140 (MQ=255) aGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGAccc > 2:910315/1‑92 (MQ=255) aGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGAccc < 1:910315/92‑1 (MQ=255) aGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTa > 2:274255/1‑140 (MQ=255) aGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTa > 2:1218087/1‑140 (MQ=255) aGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTa > 2:281554/1‑140 (MQ=255) aGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGAACGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTa > 2:1084762/1‑140 (MQ=255) acaaacaTGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGagaag < 1:1443525/140‑1 (MQ=255) aTGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAg < 2:546010/113‑1 (MQ=255) aTGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAg > 1:546010/1‑113 (MQ=255) tGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTaca > 2:223124/1‑140 (MQ=255) tGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTaca > 2:1793572/1‑140 (MQ=255) tGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTaca > 2:2394731/1‑140 (MQ=255) tGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTaca > 1:2028805/1‑140 (MQ=255) tGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTaaa > 2:2394062/1‑138 (MQ=255) gAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTacac < 1:1628492/140‑1 (MQ=255) gAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGACCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAGGAGAGAGCAAAAAAAAGCAATACAAAACGCTAGAGAGGATCTaaac < 2:1391420/140‑1 (MQ=255) gAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGACCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAGGAGAGAGCAAAAAAAAGCAATACAAAACGCTAGAGAGGATCTaaac < 2:556730/140‑1 (MQ=255) aaagaaagATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTACACGAt < 2:550330/140‑1 (MQ=255) aagaaagaTAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATCCAAAACGCTAGAGAAGATCTACACGAtc < 1:894280/140‑1 (MQ=255) aagaTAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTACACGAtctctc > 2:709260/1‑140 (MQ=255) aagaTAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTACACGAtctctc > 2:709686/1‑140 (MQ=255) cggCCGGCTGACCGGCGGTGGTACTCCGCAACGCGATCGGGAAGGCAACACACAGAATGACCCTACCCCACCGCGCGAAGAAAGAGCCAAAAAAAGCAATACAACCCGCTAGAGAAGATCTACACGATCTCTCTAGCGtt < 2:2189941/139‑1 (MQ=255) ccGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGACGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAACACGCTAGAGAAGATCTACACGATCTCTCTAGCGTTCAg < 1:1021063/140‑1 (MQ=255) gCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTACACGATCTCTCTAGCGTTCAGCtt > 1:1610843/1‑140 (MQ=255) gCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTACACGATCTCTCTAGCGTTCAGCtt > 1:1293697/1‑140 (MQ=255) cTGACCGGCGGTGTTACTCCGCAAGGCGACCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAGGAGAGAGCAAAAAAAGGCACTACAAAACGCTAGAGAGGATCTAAACGATCTCTCTAGCGTTCAGCttt > 2:1082915/1‑140 (MQ=255) aCCGGCGGTGGTACTCCTCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAACAAAGCACTACAAAACGCTAGAGAAGATCTACACGATCTCTATAGCGTTCAGCTTTTCa < 1:1004471/140‑1 (MQ=255) cggcggTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTACACGATCTCTCTAGCGTTCAGCTTTTCAAg > 1:501249/1‑140 (MQ=255) gggggtACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTACACGATCTCTCTAGCGTTCAGCTTTTCAAGCATg < 1:1091786/135‑1 (MQ=255) ggTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTACACGATCTCTCTAGCGTTCAGCTTTTCAAGCATg < 1:2167163/140‑1 (MQ=255) ggTGTTACTCCGCAAGGCGATCTGGAACGCCATAAACATAATGACCCTAACCCAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACCCTAGAGAAGATCTACACGATCTCTCTAGCGTTCAGCTTTTCAAGCATg < 1:966333/140‑1 (MQ=255) ttACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAACACGCTAGAGAAGATCTACACGATCTCTCTAGCGTTCAGCTTTTCAAGCATGCGCt < 2:824832/140‑1 (MQ=255) aCTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTACACGATCTCTCTAGCGTTCAGCTTTTCAAGCATGCGCTCa < 1:1218087/140‑1 (MQ=255) cTCCGCAAGGCGATCGGGAAGGAAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATAAAAAACGCTAGAGAAGATCTACACGATCTCTCTAGCGTTCAGCTTTTCAAGCATGCGCTCaa < 2:1440443/140‑1 (MQ=255) ccGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTACACGATCTCTCTAGCGTTCAGCTTTTCAAGCATGCGCTCAAtt > 1:2367401/1‑140 (MQ=255) cAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTACACGATCTCTCTAGCGTTCAGCTTTTCAAGCATGCGCTCAATTCCt > 1:1832268/1‑140 (MQ=255) aGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTACACGATCTCTCTAGCGTTCAGCTTTTCAAGCATGCGCTCAATTCCttt > 2:682346/1‑140 (MQ=255) ggCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTACACGATCTCTCTAGCGTTc > 2:2411824/1‑110 (MQ=255) ggCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTACACGATCTCTCTAGCGTTc < 1:2411824/110‑1 (MQ=255) tCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGACGATCTACACGATCTCTCTAGCGTTCAGCTTTTCAAGCATGCGCTCAATTCCTTTGATTtg > 1:438463/1‑140 (MQ=255) tCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTACACGATCTCTCTAGCGTTCAGCTTTTCAAGCATGCGCTCAATTCCTTTGATTtg > 1:452826/1‑140 (MQ=255) tCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGAGCTACACGATCTCTCTAGCGTTCAGCTTTTCAAGCATGCGCTCAATTCCTTTGATTtg > 1:222148/1‑140 (MQ=255) | ATCATCTGGCAAAAGAAGCGATTCGGCTGAATGATAAGAATGAAATCTCGATCAATGGTCATCCTAATGACGAGGTGAACAAACATGAAAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAGGCGATCTGGAAGGCAATACACATAATGACCCTAAAACAGAGCTTGAAGAAAGAGCCAAAAAAAGCAATACAAAACGCTAGAGAAGATCTACACGATCTCTCTAGCGTTCAGCTTTTCAAGCATGCGCTCAATTCCTTTGATTTG > NZ_CP034943/2180047‑2180323 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |