| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,611,703 | T→G | 5.1% | intergenic (‑322/+12) | alaS ← / ← EO946_RS13520 | alanine‑‑tRNA ligase/AI‑2E family transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,611,703 | 0 | T | G | 5.1% | 522.7 / 9.9 | 164 | intergenic (‑322/+12) | alaS/EO946_RS13520 | alanine‑‑tRNA ligase/AI‑2E family transporter |
| Reads supporting (aligned to +/- strand): ref base T (90/65); new base G (4/5); total (94/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 164 total aligned reads displayed.
CACTCAGGATTAGCTTCCTCCGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCAAGCAGTGCAAGCATAAT > NZ_CP034943/2611566‑2611840 | cACTCAGGATTAGCTTCCTCCGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGc > 2:1523188/1‑140 (MQ=255)cACTCAGGATTAGCTTCCTCCGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGc > 2:1996976/1‑140 (MQ=255) cTCAGGATTAGCTTCCTCCGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCAc > 2:933622/1‑140 (MQ=255) cTCAGGATTAGCTTCCTCCGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCAc > 2:211234/1‑140 (MQ=255) cTCAGGATTAGCTTCCTCCGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCAc > 2:2126937/1‑140 (MQ=255) aGGATTAGCTTCCTCCGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGcc < 1:747003/140‑1 (MQ=255) aGGATTAGCTTCCTCCGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGcc < 1:832313/140‑1 (MQ=255) gATTAGCTTCCTCCGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCaa < 2:1441516/140‑1 (MQ=255) gATTAGCTTCCTCCGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCaa < 2:1905372/140‑1 (MQ=255) gATTAGCTTCCTCCGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCaa < 2:350396/140‑1 (MQ=255) gATTAGCTTCCTCCGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCaa < 2:1929207/140‑1 (MQ=255) gATTAGCTTCCTCCGATCTTCTGAGAAAGCTCCTGTCAGCTTCCGGAGCTTCTCACTTTCACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCaa < 1:1056679/140‑1 (MQ=255) tcctccGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATg < 2:2118429/140‑1 (MQ=255) ctccGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACACGCTGCACGCCAATGTCAATGCt > 2:1471129/1‑140 (MQ=255) ctccGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCt > 2:2176714/1‑140 (MQ=255) ctccGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCt < 1:2080308/140‑1 (MQ=255) ctccGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCt > 2:2291615/1‑140 (MQ=255) ctccGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCt < 1:1626910/140‑1 (MQ=255) ctccGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAAGGCt < 1:1447670/140‑1 (MQ=255) ctccGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCACATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAACCTGCACGCCAATGTCAATGCt > 2:316870/1‑140 (MQ=255) ctccGATCTTCTGATAAAGCTCATTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCt < 2:220256/140‑1 (MQ=255) tCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTaaaaaa > 2:2007531/1‑140 (MQ=255) ccTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTaaaaaag > 2:416342/1‑139 (MQ=255) aCGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGatcatcatc > 1:1017227/1‑140 (MQ=255) aCGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGatcatcatc > 1:1109343/1‑140 (MQ=255) aCGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGatcatcatc < 2:1705953/140‑1 (MQ=255) cTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACtttt > 2:302353/1‑140 (MQ=255) tttAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGc > 2:511856/1‑140 (MQ=255) tttAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCGGCACGCCGATGTCAATGCTCCGTCCTCATCCGCAAAAAATGGATCATCATTACTTTTAAAACAGc > 2:235341/1‑140 (MQ=255) tAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCgg > 1:1936299/1‑140 (MQ=255) tAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCgg > 1:336193/1‑140 (MQ=255) ggCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATTTATTCGACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCTCAg > 1:190764/1‑140 (MQ=255) ggCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGatcatcatc > 1:389445/1‑118 (MQ=255) ggCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGatcatcatc > 1:11956/1‑118 (MQ=255) ggCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGatcatcatc < 2:389445/118‑1 (MQ=255) ggCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGatcatcatc < 2:11956/118‑1 (MQ=255) ggCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAg > 2:1483270/1‑140 (MQ=255) ggCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAg > 1:1028521/1‑140 (MQ=255) ggCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAg > 1:1373512/1‑140 (MQ=255) ggCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAg > 1:1411716/1‑140 (MQ=255) cTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACACGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGa > 2:763792/1‑140 (MQ=255) cTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGa > 1:105012/1‑140 (MQ=255) cTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGa < 2:577971/140‑1 (MQ=255) cTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGa < 2:2151345/140‑1 (MQ=255) cTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCGGCACGCCGATGTCAATGCTCCGTCCTCATCCGCAAAAAATGGATCATCATTACTTTTAAAACAGCCGTCGCAGGa > 2:499582/1‑140 (MQ=255) cTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCGGCACGCCGATGTCAATGCTCCGTCCTCATCCGCAAAAAATGGATCATCATTACTTTTAAAACAGCCGTCGCAGGa > 2:499552/1‑140 (MQ=255) cTTCGGCGTACTCAGATACGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGa < 2:2120481/140‑1 (MQ=255) ttCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGaa < 1:234589/140‑1 (MQ=255) ttCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATGATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGaa < 2:261992/140‑1 (MQ=255) ttCGGCGTACTCAGATCCGTCAATGGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGaa < 2:2318408/140‑1 (MQ=255) cGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACa > 2:1630077/1‑140 (MQ=255) cGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCAGCACTTTTAAAACAGCGGTCGCAGGAACa > 2:1440599/1‑140 (MQ=255) ggCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAg > 2:182783/1‑140 (MQ=255) cTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGaa > 2:2053933/1‑140 (MQ=255) aTCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAACTGGATCCTCATCACTTTTAACACAGCGGTCGCAGGAACAGCCAGAATCAtt > 1:710461/1‑140 (MQ=255) aTCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCAtt > 1:1812928/1‑140 (MQ=255) aTCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCAtt > 2:2309892/1‑140 (MQ=255) gTCACTCGAGATTCGTATGTATTCTACAAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCaa < 1:315729/140‑1 (MQ=255) tCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCCATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAAc > 2:600611/1‑140 (MQ=255) tCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAAc > 1:942225/1‑140 (MQ=255) tCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAAc > 2:211054/1‑140 (MQ=255) tCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAAc > 2:871243/1‑140 (MQ=255) tCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAAc > 2:2186329/1‑140 (MQ=255) aCTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGa < 1:2053933/140‑1 (MQ=255) aCTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGa < 1:168887/140‑1 (MQ=255) tCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGAtt < 2:1713820/140‑1 (MQ=255) cGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTc > 1:90471/1‑140 (MQ=255) aTTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGc < 1:1708737/140‑1 (MQ=255) aTTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGc < 2:2418653/140‑1 (MQ=255) cGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACCGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAg < 2:1333461/140‑1 (MQ=255) cGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAg < 2:110176/140‑1 (MQ=255) tACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGACCAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCgg > 2:1157247/1‑140 (MQ=255) tACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGa > 1:1194195/1‑106 (MQ=255) tACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGa < 2:73189/106‑1 (MQ=255) tACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCgg > 1:2120140/1‑140 (MQ=255) tACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCgg > 1:2333561/1‑140 (MQ=255) tACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGAGTCCCGCAAGCTCTCCTCCgg > 2:2272359/1‑140 (MQ=255) cGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGc < 2:2175520/124‑1 (MQ=255) cGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGc > 1:2175520/1‑124 (MQ=255) cGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCa > 1:594116/1‑140 (MQ=255) cGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCa > 1:2206856/1‑140 (MQ=255) cGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCa > 1:917471/1‑140 (MQ=255) agaAATTCTAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGAGTCCCGCAAGCTCTCCTCCGGCAAg < 2:826864/140‑1 (MQ=255) agaAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCAAg < 2:1268302/140‑1 (MQ=255) agaAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCAAg < 1:766207/140‑1 (MQ=255) agaAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCAAg < 2:171146/140‑1 (MQ=255) agaAATTATAGACAAGCGGCACGCCGATGTCAATGCTCCGTCCTCATCCGCAAAAAATGGATCATCATTACTTTTAAAACAGCCGTCGCAGGAACAGCCAGAATCATCCCGACGATACCCGCAAGCTCCCCTCCGGCAAg < 1:499552/140‑1 (MQ=255) gaAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCAAGc > 1:2034189/1‑140 (MQ=255) gaAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCAAGc > 1:1222742/1‑140 (MQ=255) caaaTTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCAAGc < 2:1297700/139‑1 (MQ=255) tataGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCAAGCAGTGc < 1:2176714/140‑1 (MQ=255) tataGACAAGCGGCACGCCGATGTCAATGCTCCGTCCTCATCCGCAAAAAATGGATCATCATTACTTTTAAAACAGCCGTCGCAGGAACAGCCAGAATCATCCCGACGATACCCGCAAGCTCCCCTCCGGCAAGGAGTGc < 1:235341/140‑1 (MQ=255) gCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCAAGCAGTGc < 2:678049/131‑1 (MQ=255) gCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCAAGCAGTGc > 1:678049/1‑131 (MQ=255) gCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCAAGCAGTGCAAGCATAAt > 1:1564331/1‑140 (MQ=255) gCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCAAGCAGTGCAAGCATAAt > 2:587218/1‑140 (MQ=255) gCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCAAGCAGTGCAAGCATAAt > 2:1559026/1‑140 (MQ=255) gCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCAAGCAGTGCAAGCATAAt > 1:2411394/1‑140 (MQ=255) gCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCAAGCAGTGCAAGCATAAt > 1:456814/1‑140 (MQ=255) gCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCACTCCAACGATTCCCGCAAGCTCTCCTCCGGCAAGCAGTGCAAGCATAAt > 1:2385258/1‑140 (MQ=255) | CACTCAGGATTAGCTTCCTCCGATCTTCTGATAAAGCTCCTTTCAGCTTACGGAGCTTCTCTCTTTAACAGGGCTTCGGCGTACTCAGATCCGTCACTCGAGATTCGTATGTATTCTACGAGAAATTATAGACAAGCTGCACGCCAATGTCAATGCTCCGTCCTCATCCGTAAAAAATGGATCATCATCACTTTTAAAACAGCGGTCGCAGGAACAGCCAGAATCATTCCAACGATTCCCGCAAGCTCTCCTCCGGCAAGCAGTGCAAGCATAAT > NZ_CP034943/2611566‑2611840 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |