| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,928,097 | T→C | 5.6% | intergenic (‑57/+83) | alaP ← / ← asnB | alanine permease AlaP/asparagine synthase (glutamine‑hydrolyzing) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,928,097 | 0 | T | C | 5.6% | 513.0 / 13.6 | 159 | intergenic (‑57/+83) | alaP/asnB | alanine permease AlaP/asparagine synthase (glutamine‑hydrolyzing) |
| Reads supporting (aligned to +/- strand): ref base T (84/66); new base C (5/4); total (89/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 | |||||||||||
Only 100 of 164 total aligned reads displayed.
CTCCTATAGCAGCTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCAT > NZ_CP034943/2927959‑2928227 | cTCCTATAGCAGCTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGtgtg > 1:1068408/1‑140 (MQ=255)cTCCTATAGCAGCTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGtgtg > 2:2107105/1‑140 (MQ=255)cTCCTATAGCAGCTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGtgtg > 2:1747902/1‑140 (MQ=255)cTCCTATAGCAGCTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGtgtg > 2:524023/1‑140 (MQ=255) ccTATAGCAGCTCCTCAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTCGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTGTCCGTGTGGa < 2:786048/140‑1 (MQ=255) ccTATAGCAGCTCCTAAAGACCTTACAGAAAGAGGCCATTCTTCGAGTCCGCGGTGCAGCACTTGTTTTTGTTTTTGCATGCGTTCTTCTCCCCTAGAAAAAAATCTCAATAAATCATGTTTCTGAATTTTCCGTGTGGa < 1:1490594/140‑1 (MQ=255) ccTATAGCAGCTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGa < 1:176344/140‑1 (MQ=255) ccTATAGCAGCTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGa < 2:2140525/140‑1 (MQ=255) ccTATAGCAGCTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGa < 1:707070/140‑1 (MQ=255) ccTATAGCAGCTCCTAAAGACATTAAAGAAATATGCCTTTCTTAGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGa < 1:588027/140‑1 (MQ=255) tataGCAGCTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGC‑TTCTTCTCCCCTAGAAAAAAATATCATTATATCATTTTTCTGAATATTCCGTACGGATTg > 1:940722/1‑140 (MQ=255) tataGCAGCTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGCCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGC‑TTCTTCTCCCCTAGAAAAAAATATCATTATATCATTTTTCTGAATATTCCGTACGGATTg > 1:681411/1‑140 (MQ=255) ataGCAGCTCCTAAAGACATTAAAGAAATATGCGTTTCTTCGAGTCCGCGGTGCAGGTCTGGTTTTTGTGTTTGCATGCTTTCTTATACCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTGTCCGTGTGGATTg > 1:808345/1‑140 (MQ=255) ataGCAGCTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTg > 2:1169335/1‑140 (MQ=255) ataGCAGCTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTg > 2:167714/1‑140 (MQ=255) ataGCAGCTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTg > 1:101691/1‑140 (MQ=255) taGCAGCTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTgg > 1:1764443/1‑140 (MQ=255) taGCAGCTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTgg > 1:1378758/1‑140 (MQ=255) agcagcTCCTACAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCATGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTggg < 2:1507755/140‑1 (MQ=255) agcagcTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTggg < 2:2205112/140‑1 (MQ=255) agcagcTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTggg < 2:1226858/140‑1 (MQ=255) agcagcTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTggg < 2:1346149/140‑1 (MQ=255) agcagcTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTggg < 2:35260/140‑1 (MQ=255) agcagcTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTggg < 2:435854/140‑1 (MQ=255) agcagcTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTggg < 2:457194/140‑1 (MQ=255) cagcTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTa > 1:1083797/1‑140 (MQ=255) gcTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTGTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTGTCCGTGTGGATTGGGTaaa > 2:587442/1‑140 (MQ=255) gcTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCTTGTGGATTGGGTaaa > 1:2148524/1‑140 (MQ=255) gcTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTaaa > 2:25378/1‑140 (MQ=255) gcTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTaaa > 2:916461/1‑140 (MQ=255) gcTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTaaa > 2:1072802/1‑140 (MQ=255) gcTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTaaa > 1:853976/1‑140 (MQ=255) tCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATc > 2:139528/1‑140 (MQ=255) tCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATc > 1:1598464/1‑140 (MQ=255) tCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATc > 2:1096787/1‑140 (MQ=255) tCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATc > 1:693048/1‑140 (MQ=255) tCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATc > 1:693025/1‑140 (MQ=255) tCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATc > 2:459395/1‑140 (MQ=255) tCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATc > 2:2021322/1‑140 (MQ=255) tCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATc > 1:500989/1‑140 (MQ=255) tCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATc > 2:2050378/1‑140 (MQ=255) tCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATc > 1:2174036/1‑140 (MQ=255) tCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGAGTGGGTAAAta > 2:1878223/1‑139 (MQ=255) tCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTATGAATTTTCCGTGTGGATTGGGTAAATc > 2:338055/1‑140 (MQ=255) tCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTGTGGTTGGTGCATGCTTTCTTCTCCCCTAGAAAAATATATCAATAATTCATTTTTCTGCATTTTCCGTGTGGATTGGGTACAta > 2:1259161/1‑139 (MQ=255) tCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCGTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTCAATTTTCCGAGTGGATTGGGTAAATc > 2:1659864/1‑140 (MQ=255) cTAAAGACATTAAAGACATATCCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTGGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCaa < 2:67323/140‑1 (MQ=255) cTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCAGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCaa < 2:867937/140‑1 (MQ=255) cATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGC‑TTCTTCTCCCCTAGAAAAAAATATCATTATATCATTTTTCTGAATATTCCGTACGGATTGGGTAAATCAatgatgatg > 2:625544/1‑140 (MQ=255) cATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGC‑TTCTTCTCCCCTAGAAAAAAATATCATTATATCATTTTTCTGAATATTCCGTACGGATTGGGTAAATCAatgatgatg > 2:2331193/1‑140 (MQ=255) aTTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAatgatgatg > 2:1389800/1‑140 (MQ=255) aTTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAatgatgatg > 1:661660/1‑140 (MQ=255) aTTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAatgatgatg > 1:569823/1‑140 (MQ=255) tAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATgaa > 2:1287978/1‑140 (MQ=255) tAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATgaa > 2:152210/1‑140 (MQ=255) tAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATgaa > 2:2426180/1‑140 (MQ=255) tAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATgaa > 2:55750/1‑140 (MQ=255) tatGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAaataat > 2:2378036/1‑140 (MQ=255) tatGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAaataat > 2:398755/1‑140 (MQ=255) gCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATaaa < 2:1629330/140‑1 (MQ=255) tcttctAGTCTGCTGTGGAGATATTTTTTTTGTTTTTGAATTCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTTTGTAAATCAATGATGATTAATAAATAATAAAAGGat < 2:2001864/140‑1 (MQ=255) tctgcGATTACGCGGTGCAGCTATTTATTGTGTTATTGCATGCTTTCTTCTCCCCCAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTTGATTGGGTAAATCAATGATTATGAAGAAATAATAAACGGat < 2:888459/140‑1 (MQ=255) ttcGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGataa > 2:191621/1‑140 (MQ=255) gTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACa > 1:935162/1‑140 (MQ=255) cgcgGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATaaa > 1:369279/1‑125 (MQ=255) cgcgGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATaaa < 2:369279/125‑1 (MQ=255) cAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTcga > 1:245657/1‑140 (MQ=255) cAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTcga > 1:2221620/1‑140 (MQ=255) aGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTcgac < 2:853976/140‑1 (MQ=255) ctTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATAAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAAAAAGGCTTTCGACGAAt > 2:2190542/1‑140 (MQ=255) gtttttgtttttGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGa > 1:2068353/1‑140 (MQ=255) gtttttgtttttGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGa > 1:2248958/1‑140 (MQ=255) ttgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCttgtt < 2:693048/140‑1 (MQ=255) ttgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCttgtt < 1:1015708/140‑1 (MQ=255) ttgCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCttgtt < 1:418572/140‑1 (MQ=255) tGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTg < 2:661660/140‑1 (MQ=255) gCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGt < 1:1860209/140‑1 (MQ=255) tcCCCTATAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAg < 1:2050516/140‑1 (MQ=255) tcCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAg < 1:1404245/140‑1 (MQ=255) cccTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGAt > 2:500283/1‑140 (MQ=255) cccTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGAt > 2:2407386/1‑140 (MQ=255) cTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTTTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGa < 2:1988403/140‑1 (MQ=255) cTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGa < 1:2165745/140‑1 (MQ=255) cTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGa < 1:1331996/140‑1 (MQ=255) tAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGACGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGAc > 2:2309103/1‑140 (MQ=255) tAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGAc > 1:209489/1‑140 (MQ=255) tAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGAGTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGAc > 2:674043/1‑140 (MQ=255) aaaaTATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCttt < 2:830398/140‑1 (MQ=255) cAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCtga < 1:55955/140‑1 (MQ=255) cATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAg < 1:1642067/140‑1 (MQ=255) aTTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGc > 2:2269261/1‑140 (MQ=255) tttttCTGAATATTCCGTACGGATTGGGTAAATCAATGATGATGGAGA‑‑‑AATAAAAGGATAACAACAAGGCTTTCGACTACTCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTAGGCTGATGGCTCAGCTCtt < 2:940722/140‑1 (MQ=255) tttttCTGAATATTCCGTACGGATTGGGTAAATCAATGATGATGGAGA‑‑‑AATAAAAGGATAACAACAAGGCTTTCGACTACTCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTAGGCTGATGGCTCAGCTCtt < 1:625544/140‑1 (MQ=255) tttttCTGAATATTCCGTACGGATTGGGTAAATCAATGATGATGGAGA‑‑‑AATAAAAGGATAACAACAAGGCTTTCGACTACTCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTAGGCTGATGGCTCAGCTCtt < 2:681411/140‑1 (MQ=255) tttttCTGAATATTCCGTACGGATTGGGTAAATCAATGATGATGGAGA‑‑‑AATAAAAGGATAACAACAAGGCTTTCGACTACTCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTAGGCTGATGGCTCAGCTCtt < 1:2331193/140‑1 (MQ=255) ttttCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTGGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGctc > 1:2253463/1‑140 (MQ=255) ttCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCtt < 1:191621/140‑1 (MQ=255) ttCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCtt < 1:2433960/140‑1 (MQ=255) ttCTGAATTTTCCGTGTGGACTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCtt < 1:1241885/140‑1 (MQ=255) ttttCCGTGTGGATTGGGTAAATCACTGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCat > 2:920194/1‑140 (MQ=255) | CTCCTATAGCAGCTCCTAAAGACATTAAAGAAATATGCCTTTCTTCGAGTCCGCGGTGCAGCTCTTGTTTTTGTTTTTGCATGCTTTCTTCTCCCCTAGAAAAAAATATCAATAAATCATTTTTCTGAATTTTCCGTGTGGATTGGGTAAATCAATGATGATGAAGAAATAATAAAAGGATAATAACAAGGCTTTCGACGAATCGAAAGCCTTGTTGTCTGTTACACAAAGATGACTTCTTTCGGCTGATGACTCAGCTCTTCAGGCAT > NZ_CP034943/2927959‑2928227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |