| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,945,599 | G→T | 5.3% | intergenic (+26/‑28) | EO946_RS15185 → / → EO946_RS15190 | cytochrome d ubiquinol oxidase subunit II/DUF1540 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,945,599 | 0 | G | T | 5.3% | 410.9 / 7.5 | 132 | intergenic (+26/‑28) | EO946_RS15185/EO946_RS15190 | cytochrome d ubiquinol oxidase subunit II/DUF1540 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (61/63); new base T (3/4); total (64/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 | |||||||||||
Only 100 of 132 total aligned reads displayed.
GAGCGCTGTTTGCGACGTATATCGTTGCATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGCCATACTGGTGAAACGGCTGAAA > NZ_CP034943/2945464‑2945738 | gcgcTGTTTGCGACGTATATCGTTGCATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAATCCAGaa < 1:61438/140‑1 (MQ=255) gcgcTGTTTGCGACGTATATCGTTGCATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGaa < 1:913959/140‑1 (MQ=255) cTGTTTGCGACGTATATCGTTGCATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCt > 2:356684/1‑140 (MQ=255) tGTTTGCGACGTATATCGTTGCATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCtt > 2:1311381/1‑140 (MQ=255) tGTTTGCGACGTATATCGTTGCATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCtt > 2:35319/1‑140 (MQ=255) tGTTTGCGACGTATATCGTTGCATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCtt > 2:1004755/1‑140 (MQ=255) tGTTTGCGACGTATATCGTTGCATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCtt > 2:664076/1‑140 (MQ=255) tGTTTGCGACGTATATCGTTGCATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCtt > 2:41497/1‑140 (MQ=255) gTATATCGTTGCATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACATTTATAaggagg > 2:1150948/1‑140 (MQ=255) atatCGTTGCATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAgggg > 2:385374/1‑140 (MQ=255) tatCGTTGCATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGa < 2:2024907/140‑1 (MQ=255) tatCGTTGCATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGa < 2:1168129/140‑1 (MQ=255) tatCGTTGCATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGa < 2:2267712/140‑1 (MQ=255) tatCGTTGCATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGa < 2:130622/140‑1 (MQ=255) tatCGTTGCATTTATCATTCTCTTTCCAGGCGTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGa < 2:129820/140‑1 (MQ=255) tatCGTTGCATTTATAATTCTCTGTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGa < 2:1268095/140‑1 (MQ=255) atCGTTGCATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGTACAAGCCCGAGGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGAt > 1:1161254/1‑140 (MQ=255) cATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGaa < 2:2315884/115‑1 (MQ=255) cATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGaa > 1:2315884/1‑115 (MQ=255) aTCATTCTATTTCCGGGCTTCTTTTTCTTCTGGAAAATGTTTATGCGAGATAAACGCTATATCCGCCAGGAGGAATAGAGGGCAAGCCAGCCGGCTATACTAATCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAg > 2:2014731/1‑140 (MQ=255) aTCATTCTATTTCCGGGCTTCTTTTTCTTCTGGAAAATGTTTATGCGAGATAAACGCTATATCCGCCAGGAGGAATAGAGGGCAAGCCAGCCGGCTATACTAATCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAg > 2:807288/1‑140 (MQ=255) aTCATTCTATTTCCGGGCTTCTTTTTCTTCTGGAAAATGTTTATGCGAGATAAACGCTATATCCGCCAGGAGGAATAGAGGGCAAGCCAGCCGGCTATACTAATCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAg > 2:807437/1‑140 (MQ=255) tCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGa < 1:1679022/140‑1 (MQ=255) cATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCGTTATAAGGAGGGGATGGCATGGAGCAGaa > 2:1663653/1‑140 (MQ=255) tctcTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAAGAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAAt > 1:1992123/1‑140 (MQ=255) ttCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTAt > 2:1466067/1‑140 (MQ=255) tCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAAt > 2:1551293/1‑134 (MQ=255) tCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAAt < 1:1551293/134‑1 (MQ=255) ccggCTTCTATTTTTTCGGGAAACTGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCg < 1:942419/138‑1 (MQ=255) cAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCg < 1:448393/140‑1 (MQ=255) cAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCg < 1:448569/140‑1 (MQ=255) cAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCg < 1:768055/140‑1 (MQ=255) cAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTGTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCg < 1:724215/140‑1 (MQ=255) ttCTTTTTCTTCTGGAAAATGTTTATGCGAGATAAACGCTATATCCGCCAGGAGGAATAGAGGGCAAGCCAGCCGGCTATACTAATCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGTGAGGTc < 1:807437/140‑1 (MQ=255) ttCTTTTTCTTCTGGAAAATGTTTATGCGAGATAAACGCTATATCCGCCAGGAGGAATAGAGGGCAAGCCAGCCGGCTATACTAATCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGTGAGGTc < 1:807288/140‑1 (MQ=255) ttCTTTTTCTTCTGGAAAATGTTTATGCGAGATAAACGCTATATCCGCCAGGAGGAATAGAGGGCAAGCCAGCCGGCTATACTAATCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGTGAGGTc < 1:2014731/140‑1 (MQ=255) tATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTcaac > 2:470078/1‑140 (MQ=255) ttttttCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGACCCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTcaacaa < 2:1916531/140‑1 (MQ=255) ttttttCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTcaacaa < 1:1095885/140‑1 (MQ=255) ttttttCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTcaacaa < 1:1442219/140‑1 (MQ=255) ttttttCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTcaacaa < 2:344609/140‑1 (MQ=255) tCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTATATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGtt > 2:2366292/1‑140 (MQ=255) ttATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCa < 2:1156407/140‑1 (MQ=255) cGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGa < 1:559815/140‑1 (MQ=255) cGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGa < 1:246057/140‑1 (MQ=255) cGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGa < 1:2280969/140‑1 (MQ=255) cGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGa < 1:987368/140‑1 (MQ=255) cGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCAAGAACCTTTATAATGAGGGGATGTCTTGGAGCAGAAAATTCTATGCGTAGTCAACAACTGTTCTTATTGGGGCAAAGGa < 1:1263260/140‑1 (MQ=255) aTAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCCGAACCGTTATAAGGAGGGGATGGCATGGAGCAGACAATTCTATGCGAAGTCAACACCTGTTCTTATTGGGGCACAGGAACCa > 1:2161058/1‑140 (MQ=255) tataTCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCAcc > 1:2353011/1‑140 (MQ=255) tataTCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCAcc > 2:377467/1‑140 (MQ=255) tataTCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCAcc > 2:377686/1‑140 (MQ=255) atatCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCg > 2:173167/1‑140 (MQ=255) tatCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATg > 2:137126/1‑134 (MQ=255) tatCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATg < 1:137126/134‑1 (MQ=255) ccGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTcaac < 2:923510/99‑1 (MQ=255) ccGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTcaac > 1:923510/1‑99 (MQ=255) ccGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTcaac < 2:2356743/99‑1 (MQ=255) ccGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTcaac > 1:2356743/1‑99 (MQ=255) cGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGAt < 2:1095961/140‑1 (MQ=255) cGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGAt < 2:1959585/140‑1 (MQ=255) cGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACCAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGAt < 2:311851/140‑1 (MQ=255) ccAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTtat > 1:1406831/1‑52 (MQ=255) ccAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTtat < 2:1406831/52‑1 (MQ=255) ccAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGa > 1:1058715/1‑76 (MQ=255) ccAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGa < 2:1058715/76‑1 (MQ=255) aaGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCg < 1:2125608/86‑1 (MQ=255) aaGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCg > 2:2125608/1‑86 (MQ=255) gagGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCAtt > 2:2194936/1‑140 (MQ=255) agGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCAttt < 1:2247109/140‑1 (MQ=255) agGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCAttt < 1:490277/140‑1 (MQ=255) gagGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTAtgttgt < 1:2194936/140‑1 (MQ=255) agGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTc > 2:2336237/1‑140 (MQ=255) agGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTc < 2:1825966/140‑1 (MQ=255) agGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTc > 1:1758066/1‑140 (MQ=255) gACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGc > 1:995083/1‑125 (MQ=255) gACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAg > 1:757737/1‑140 (MQ=255) gACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAg > 1:567470/1‑140 (MQ=255) gACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAg > 2:1051394/1‑140 (MQ=255) gACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAg > 1:1242430/1‑140 (MQ=255) gACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAg > 1:106305/1‑140 (MQ=255) cAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGcc > 2:2259975/1‑140 (MQ=255) cAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGcc > 2:2262994/1‑140 (MQ=255) cAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGcc > 2:1383252/1‑140 (MQ=255) aaaGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGACATTTATGTTGTCAGcc > 2:1256132/2‑140 (MQ=255) aaGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGCCa > 1:504688/1‑140 (MQ=255) aaGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGCCa > 1:1696821/1‑140 (MQ=255) gCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGCCaga > 2:1583185/1‑138 (MQ=255) gCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGCCATa > 1:489550/1‑140 (MQ=255) gCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGCCATa > 2:235026/1‑140 (MQ=255) cccGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGCCATAc < 1:35319/140‑1 (MQ=255) cccGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGCCATAc < 1:1004755/140‑1 (MQ=255) aCGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGCCATACTGGt > 1:2404114/1‑140 (MQ=255) aCGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGCCATACTGGt > 1:1979904/1‑140 (MQ=255) aGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGTGAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGCCATACTGGTGAAACGGCTGaa > 2:1428745/1‑140 (MQ=255) aGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGCCATACTGGTGAAACGGCTGaa > 1:2176833/1‑140 (MQ=255) aGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGCCATACTGGTGAAACGGCTGaa > 1:824441/1‑140 (MQ=255) aGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGCCATACTGGTGAAACGGCTGaa > 2:1051451/1‑140 (MQ=255) aGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGCCATACTGGTGAAACGGCTGaa > 2:1724072/1‑140 (MQ=255) aGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTCGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGCCATACTGGTGAAACGGCTGaa > 1:2025696/1‑140 (MQ=255) | GAGCGCTGTTTGCGACGTATATCGTTGCATTTATCATTCTCTTTCCAGGCTTCTATTTTTTCTGGAAAATGTTTATGCGTGATAAACGGTATATCCGCCAAGAGGAATAGAGGACAAGCCCGACGGCTATACTAAGCCAGAACCTTTATAAGGAGGGGATGGCATGGAGCAGAAAATTCTATGCGAAGTCAACAACTGTTCTTATTGGGGCAAAGGAAACAAATGCACCGCTGATGCCATTTATGTTGTCAGCCATACTGGTGAAACGGCTGAAA > NZ_CP034943/2945464‑2945738 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |