| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 438,597 | G→A | 5.3% | A46A (GCC→GCT) | gabR ← | transcriptional regulator GabR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 438,597 | 0 | G | A | 5.3% | 627.7 / 15.1 | 189 | A46A (GCC→GCT) | gabR | transcriptional regulator GabR |
| Reads supporting (aligned to +/- strand): ref base G (71/108); new base A (4/6); total (75/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 190 total aligned reads displayed.
ATGGGGGGTGCTCCACGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATT > NZ_CP034943/438458‑438735 | ggggggTGCTCCACGGCAGAAAACAGGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACACATAGCCCTCAGCCAGAAGCTGCTGATAGGCGGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGc < 1:1205277/140‑1 (MQ=255) gagggTGCTCCTCGGCGGAAAACATGTCTAGTTCCTCCACGAAGAAACCCTTTCGTTCAATGGCGTACAAATACCCCTCAGCCAGCAGCTGCTGATAGGCTGAATTCACTGAATTTACGCTGACCTTGAGATTTTCAGcc > 1:100111/3‑140 (MQ=255) gagggTGCTCCTCGGCGGAAAACATGTCTAGTTCCTCCACGAAGAAACCCTTTCGTTCAATGGCGTACAAATACCCCTCAGCCAGCAGCTGCTGATAGGCTGAATTCACTGAATTTACGCTGACCTTGAGATTTTCAGcc > 1:1127422/3‑140 (MQ=255) gagggTGCTCCTCGGCGGAAAACATGTCTAGTTCCTCCACGAAGAAACCCTTTCGTTCAATGGCGTACAAATACCCCTCAGCCAGCAGCTGCTGATAGGCTGAATTCACTGAATTTACGCTGACCTTGAGATTTTCAGcc > 1:397235/3‑140 (MQ=255) gagggTGCTCCTCGGCGGAAAACATGTCTAGTTCCTCCACGAAGAAACCCTTTCGTTCAATGGCGTACAAATACCCCTCAGCCAGCAGCTGCTGATAGGCTGAATTCACTGAATTTACGCTGACCTTGAGATTTTCAGcc > 1:621177/3‑140 (MQ=255) gggTGCTCCACGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAg > 2:524815/1‑140 (MQ=255) gTGCTCCACGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGct < 1:1805021/140‑1 (MQ=255) gTGCTCCACGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGct < 1:1961474/140‑1 (MQ=255) gTGCTCCACGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGct < 1:1402104/140‑1 (MQ=255) gTGCTCCACGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGct < 1:591277/140‑1 (MQ=255) gTGCTCCACGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGct < 2:925159/140‑1 (MQ=255) gTGCTCCACGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGct < 2:961335/140‑1 (MQ=255) gTGCTCCACGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCATCAGCTTCTCGGCCAGct < 1:2415839/140‑1 (MQ=255) gTGCTCCACGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAAGGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGct < 1:2283995/140‑1 (MQ=255) gCTCCACGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGctct > 2:1070964/1‑140 (MQ=255) gCTCCACGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGctct < 1:2015774/140‑1 (MQ=255) gCTCCACGGCAGAAAACATGTCCAGCGTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATAGCCCGCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGctct < 1:698905/140‑1 (MQ=255) cTCCACGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGctctc > 2:266132/1‑140 (MQ=255) cTCCACGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGctctc > 1:1008180/1‑140 (MQ=255) ccACGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGctctctc < 2:298003/140‑1 (MQ=255) ctcggcggAAAACATGTCTAGTTCCTCCACGAAGAAACCCTTTCGTTCAATGGCGTACAAATACCCCTCAGCCAGCAGCTGCTGATAGGCTGAATTCACTGAATTTACGCTGACCTTGAGATTTTCAGCCAGctcccgct < 2:1205147/138‑6 (MQ=255) cGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTg > 1:1269634/1‑140 (MQ=255) cGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTg > 1:1808203/1‑140 (MQ=255) cGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTg < 2:891957/140‑1 (MQ=255) gCAGAACAAATGTCCAGCTTCTCCCCGAAAACCCCCTGTCGCTCAATGGCGTACAAATATCCCTCACCCAGAAGCTGCCGCTAGGCTGAATTCACTGAGTTTACGCTGACCTGCAGCTTCTCGGCCAGCTCTCTCTTGGa < 2:501739/140‑1 (MQ=255) cAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAg > 2:411574/1‑140 (MQ=255) gTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCg < 2:44127/140‑1 (MQ=255) cAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAgt > 1:2245631/1‑140 (MQ=255) cTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGtgtg > 2:2311140/1‑140 (MQ=255) tcCACGTAAAACCCATTTCGCTCAATTGCGTTCAAATATCCCTCAGCCAGATGCTGCTGTTAGGCTGAATTCACTGAGTTGACGCTGACCTTCAGCTTCTCGGGCAGCTCTCTCTTGGAGGGGAGCTTCGAGTGTTgcag < 2:1348496/140‑1 (MQ=255) tcCACGAAAAACCCCTTTCGCTGAAGGGCGGACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGCTTACGCTGACCTTCAGGGTCTCGGCCAGCGCTCTCTTGGAGGGGACCTTCGAGTGTGgcag < 2:2014946/140‑1 (MQ=255) tcCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGgcag < 2:1912651/140‑1 (MQ=255) tcCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGgcag < 2:1367315/140‑1 (MQ=255) tcCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGgcag < 2:1336329/140‑1 (MQ=255) tcCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGgcag < 1:2118609/140‑1 (MQ=255) tcCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGgcag < 1:1042564/140‑1 (MQ=255) gccACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCGGCTGATAGGCTGAAGTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGgcag < 2:1607764/139‑1 (MQ=255) gAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCGTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGAt < 1:1650396/140‑1 (MQ=255) cccTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCt > 1:2277529/1‑140 (MQ=255) tCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGaa > 1:2081827/1‑140 (MQ=255) cTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAAttt > 1:1811270/1‑140 (MQ=255) tGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCtttt > 1:589286/1‑140 (MQ=255) cGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAgg > 1:1466645/1‑93 (MQ=255) tACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTTGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAg > 2:1417446/1‑140 (MQ=255) tACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAg > 1:1070552/1‑140 (MQ=255) atatCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGttttt > 1:1088496/1‑140 (MQ=255) atatCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGttttt > 1:763274/1‑140 (MQ=255) atCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGctc < 1:1360008/73‑1 (MQ=255) atCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGa > 2:534606/1‑140 (MQ=255) tCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGAt > 2:951733/1‑140 (MQ=255) cAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAAtt > 2:518340/1‑140 (MQ=255) ccAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGc > 1:1392414/1‑140 (MQ=255) gAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTga < 2:1683597/140‑1 (MQ=255) gAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTga < 2:1503665/140‑1 (MQ=255) gAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTga < 2:1795722/140‑1 (MQ=255) gAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTga < 2:2203670/140‑1 (MQ=255) gAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTga < 1:313707/140‑1 (MQ=255) ctgATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGatat > 1:1271727/1‑140 (MQ=255) gATAGGCTGAATTCACTGAGTTTACTCTTACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGTACCTTCGAGTGTGGCAGAAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATaa < 2:2029410/140‑1 (MQ=255) gATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATaa < 2:941325/140‑1 (MQ=255) gATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATaa < 2:621444/140‑1 (MQ=255) gATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATaa < 1:2071842/140‑1 (MQ=255) gATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATaa < 2:184262/140‑1 (MQ=255) gATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATaa < 1:888514/140‑1 (MQ=255) gATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATaa < 2:1010415/140‑1 (MQ=255) gATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATaa < 2:2277529/140‑1 (MQ=255) gATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCGGATAGATATaa < 2:745751/140‑1 (MQ=255) gATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTGTTTGATAAATTTGCTGATAGAtatac < 2:1017572/140‑2 (MQ=255) gATAGGCTGAATTCACTGAGTTTACGCTGAACTTCATCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTTTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATaa < 1:926920/140‑1 (MQ=255) ggCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCgg < 2:147433/140‑1 (MQ=255) gCTGACTTCACTGAGTTTACGCGGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGc < 2:1174001/140‑1 (MQ=255) gCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGc < 1:518340/140‑1 (MQ=255) gCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGc < 2:2245631/140‑1 (MQ=255) gCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGc < 1:1547614/140‑1 (MQ=255) gCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGc < 1:1593134/140‑1 (MQ=255) gCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGc < 1:2311140/140‑1 (MQ=255) gCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGc < 2:1717626/140‑1 (MQ=255) gCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGc < 1:430594/140‑1 (MQ=255) gCTGAATTCAATGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGc < 2:1374339/140‑1 (MQ=255) gtGAGTTTACTCTTAGCTTGAGGTTATCGTCCTGTTTTGTTTTGGTGGGGAGCTTCGATTGTGGCAGAATATTACTGCTGTTAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGTTAGTTATATTCGGTTTGTTTTGAg < 2:2174474/139‑1 (MQ=255) cTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAg < 2:850278/140‑1 (MQ=255) cTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAg < 2:1392414/140‑1 (MQ=255) tttACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTc < 1:448435/140‑1 (MQ=255) tttACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTc < 1:884682/140‑1 (MQ=255) tttACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTc > 1:1420899/1‑140 (MQ=255) ccGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTGGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAg < 2:2133966/139‑1 (MQ=255) aCGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAg < 2:1292592/140‑1 (MQ=255) cGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGc < 1:1737763/121‑1 (MQ=255) tGACCTTGAGATTTTCAGCCAGCTCCCGCTTGGAGGGAACCTTCGAGTGCGGCAGCAGATTGCGGCTGAGGATTTCTTTTTTCAGCTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAACGATCGAgtgta < 2:397235/140‑2 (MQ=255) tGACCTTGAGATTTTCAGCCAGCTCCCGCTTGGAGGGAACCTTCGAGTGCGGCAGCAGATTGCGGCTGAGGATTTCTTTTTTCAGCTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAACGATCGAgtgta < 2:1582267/140‑2 (MQ=255) tGACCTTGAGATTTTCAGCCAGCTCCCGCTTGGAGGGAACCTTCGAGTGCGGCAGCAGATTGCGGCTGAGGATTTCTTTTTTCAGCTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAACGATCGAgtgta < 2:100111/140‑2 (MQ=255) gACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGa < 1:259773/140‑1 (MQ=255) gACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGa > 1:2326792/1‑140 (MQ=255) gACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGa > 2:1832870/1‑140 (MQ=255) gCTTCTCGGCCAGCTCGCGCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATg < 2:1454480/140‑1 (MQ=255) tctcGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTcc > 2:202061/1‑140 (MQ=255) ctcGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCa > 2:2141747/1‑140 (MQ=255) ctcGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAAGTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCa > 1:1363448/1‑140 (MQ=255) tcGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCAt > 1:1154646/1‑140 (MQ=255) cGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCAtt < 1:827976/140‑1 (MQ=255) | ATGGGGGGTGCTCCACGGCAGAAAACATGTCCAGCTTCTCCACGAAAAACCCCTTTCGCTCAATGGCGTACAAATATCCCTCAGCCAGAAGCTGCTGATAGGCTGAATTCACTGAGTTTACGCTGACCTTCAGCTTCTCGGCCAGCTCTCTCTTGGAGGGGACCTTCGAGTGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATT > NZ_CP034943/438458‑438735 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |