| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,036,047 | T→C | 8.0% | H10H (CAT→CAC) | kinB → | sporulation sensor histidine kinase KinB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,036,047 | 0 | T | C | 8.0% | 223.4 / 8.4 | 75 | H10H (CAT→CAC) | kinB | sporulation sensor histidine kinase KinB |
| Reads supporting (aligned to +/- strand): ref base T (41/28); new base C (3/3); total (44/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.93e-01 | |||||||||||
GCCTTTACGTCATTCGTAAAGGCGTTCTTTATAAAGGAATTTTATATTTTACTTCTAATATTTAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCC > NZ_CP034943/3035910‑3036184 | gCCTTTACGTCATTCGTAAAGGCGTTATTTATAAAGGAATTTTATATTTTACTTCTAATATTTAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCatat < 2:1214919/140‑1 (MQ=255) ttACGTCATTCGTAAAGGCGTTCTTTATAAAGGAATTTTATATTTTACTTCTAATATTTAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGc > 2:624820/1‑140 (MQ=255) tACGTCATTCGTAAAGGCGTTCTTTATAAAGGAATTTTATATTTTACTTCTAATATTTAGTGTTATAATAGATTCATATTTTATACGAAATGATTTCACACGAATGGAAATTCTAAAAGTCTATCTCCTGCATATCTGCt > 2:1471002/1‑140 (MQ=255) tACGTCATTCGTAAAGGCGTTCTTTATAAAGGAATTTTATATTTTACTTCTAATATTTAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCt < 2:562663/140‑1 (MQ=255) tACGTCATTCGTAAAGGCGTTCTTTATAAAGGAATTTTATATTTTACTTCTAATATTTAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCt > 2:1764723/1‑140 (MQ=255) ttCGTAAAGGCGTTCTTTATAAAGGAATTTTATATTTTACTTCTAATATTTAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTAtttt > 2:993964/1‑140 (MQ=255) ttCGTAAAGGCGTTCTTTATAAAGGAATTTTATATTTTACTTCTAATATTTAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTAtttt > 2:2187750/1‑140 (MQ=255) gTAAAGGCGTTCTTTATAAAGGAATTTTATATTTTACTTCTAATATTTAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGtt < 1:1822395/140‑1 (MQ=255) gTAAAGGCGTTATTTATAAAGGAATTTTATATTTTACTTCTAATATTTAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGtt < 2:158219/140‑1 (MQ=255) aaaGGCGTTCTTTATAAAGGAATTTTATATTTTACTTCTAATATTTAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTc > 1:294978/1‑140 (MQ=255) aaGGCGTTCTTTATAAAGGAATTTTATATTTTACTTCTAATATTTAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTcc > 1:1085166/1‑140 (MQ=255) ggCGTTCTTTATACAGGAATTTTATATTTTACTTCTAATATTTAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTa < 1:386598/140‑1 (MQ=255) atTTTACTTCTAATATTTAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCt < 1:1240946/140‑1 (MQ=255) atTTTACTTATAATATTTAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCt < 1:976867/140‑1 (MQ=255) tACTTCTAATATTTAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGa > 1:196590/1‑140 (MQ=255) tACTTCTAATATTTAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGa > 1:55064/1‑140 (MQ=255) tAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGAGTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGATTGGAAATCCGGCGATcc > 2:2120247/1‑140 (MQ=255) tgtTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTCTCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTtg > 1:591195/1‑140 (MQ=255) tgtTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTTCTGCACATCTGCTTTATTTTGTTTCCTATTCTTCTTTACCAAGTGTTTTGGCTTGGAAAACCTGCGATTCTtg > 1:668707/1‑140 (MQ=255) tgtTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTTCTGCACATCTGCTTTATTTTGTTTCCTATTCTTCTTTACCAAGTGTTTTGGCTTGGAAAACCTGCGATTCTtg > 1:2374105/1‑140 (MQ=255) tgtTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTTCTGCACATCTGCTTTATTTTGTTTCCTATTCTTCTTTACCAAGTGTTTTGGCTTGGAAAACCTGCGATTCTtg > 1:2374122/1‑140 (MQ=255) tgtTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTtg > 1:722852/1‑140 (MQ=255) tataATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGc < 2:1085166/140‑1 (MQ=255) ataataGATTCTTATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGcc > 1:598067/1‑140 (MQ=255) ataataGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATGTGCTTTATTTTGTTTCCTCTTCTTCTCTACCAAGTGTTTTGGCTTGGATAGCCGGCGAGCCTTGTGcc > 1:1544879/1‑140 (MQ=255) ataataGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGcc > 2:1716852/1‑140 (MQ=255) ataataGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGcc > 2:1500208/1‑140 (MQ=255) ataataGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGcc > 1:1737361/1‑140 (MQ=255) ataataGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGcc > 1:1857438/1‑140 (MQ=255) ataataGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGcc > 1:1256217/1‑140 (MQ=255) ataataGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGcc > 1:2147085/1‑140 (MQ=255) gATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAAt > 1:369536/1‑140 (MQ=255) gATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAAt > 1:479822/1‑140 (MQ=255) gATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAAt > 1:2399023/1‑140 (MQ=255) gATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCGATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAAt > 1:389148/1‑140 (MQ=255) ttCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAATCCGGCGATCCTTGTGCCCAAAATaa > 2:2008130/1‑140 (MQ=255) ttCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATaa > 2:588294/1‑140 (MQ=255) tatTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAg > 2:569954/1‑140 (MQ=255) tatTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAg > 2:1140911/1‑140 (MQ=255) ttttATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCg < 2:2147085/140‑1 (MQ=255) tcttcGACAGCATTTCACAAGAATCGCAATTCAACAAGACTATCTCCTGCATATCTGATTTATTGTGTTTCCTATTCTGCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCGAAAATAAACAGCGGGt < 1:666624/136‑1 (MQ=255) tataCGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGt > 1:1960640/1‑140 (MQ=255) tataCGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGt > 1:1505622/1‑140 (MQ=255) tataCGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGt > 1:2044832/1‑140 (MQ=255) tataCGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGt > 1:834876/1‑140 (MQ=255) tataCGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGt > 2:438402/1‑140 (MQ=255) cGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTCCCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGt < 1:733801/140‑1 (MQ=255) cGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGt < 1:2139558/140‑1 (MQ=255) cGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGt < 2:2399023/140‑1 (MQ=255) cGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGt < 1:2370502/140‑1 (MQ=255) cGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGt < 2:479822/140‑1 (MQ=255) aaGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCAc > 1:2022106/1‑140 (MQ=255) aaGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCAc > 1:745009/1‑140 (MQ=255) gATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTATACCAAGGGTTTTGGCTTGGAAAGCCGGCGCTCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGtt > 2:1244072/1‑140 (MQ=255) gAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTgc > 2:2106584/1‑140 (MQ=255) aTGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTgcgg < 1:914612/140‑1 (MQ=255) aTGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTgcgg < 1:914532/140‑1 (MQ=255) aaTTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCt < 1:2187750/140‑1 (MQ=255) aaaGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGtttt < 2:196590/140‑1 (MQ=255) aGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTAt < 2:722852/140‑1 (MQ=255) gACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATg < 2:1162111/140‑1 (MQ=255) aCTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGc < 2:1574794/140‑1 (MQ=255) cTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCa < 1:1102583/140‑1 (MQ=255) cTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCa < 1:494501/140‑1 (MQ=255) tctcCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCgg > 1:1001412/1‑96 (MQ=255) tctcCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCgg < 2:1001412/96‑1 (MQ=255) cTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATAtt < 2:986634/140‑1 (MQ=255) tGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTc > 1:550922/1‑140 (MQ=255) gCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTcc > 1:2039331/1‑140 (MQ=255) gCACATCTGCTTTATTTTGTTTCCTATTCTTCTTTACCAAGTGTTTTGGCTTGGAAAACCTGCGATTCTTGTGCCAAAAATAAACAGCGGTTTGGTCACGCTCTTCGCCTGCGGCGCCTCCGTTTTATGCATTATTTTcc < 2:668707/140‑1 (MQ=255) gCACATCTGCTTTATTTTGTTTCCTATTCTTCTTTACCAAGTGTTTTGGCTTGGAAAACCTGCGATTCTTGTGCCAAAAATAAACAGCGGTTTGGTCACGCTCTTCGCCTGCGGCGCCTCCGTTTTATGCATTATTTTcc < 2:2374105/140‑1 (MQ=255) gCACATCTGCTCTATTTTGTTTCCTATTCTTCTTTACCAAGTGTTTTGGCTTGGAAAACCTGCGATTCTTGTGCCAAAAATAAACAGCGGTTTGGTCACGCTCTTCGCCTGCGGCGCCTCCGTTTTATGCATTATTTTcc < 2:2374122/140‑1 (MQ=255) cATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCCAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTccc < 2:66822/140‑1 (MQ=255) cATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTccc > 2:385100/1‑140 (MQ=255) cATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTccc < 2:64825/140‑1 (MQ=255) cATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTccc < 2:66853/140‑1 (MQ=255) | GCCTTTACGTCATTCGTAAAGGCGTTCTTTATAAAGGAATTTTATATTTTACTTCTAATATTTAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCC > NZ_CP034943/3035910‑3036184 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |