| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,036,110 | C→T | 5.2% | I31I (ATC→ATT) | kinB → | sporulation sensor histidine kinase KinB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,036,110 | 0 | C | T | 5.2% | 378.0 / 6.8 | 115 | I31I (ATC→ATT) | kinB | sporulation sensor histidine kinase KinB |
| Reads supporting (aligned to +/- strand): ref base C (54/55); new base T (3/3); total (57/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.91e-01 | |||||||||||
Only 100 of 116 total aligned reads displayed.
TAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACTACATACAATACGGCCTTCAGATGATTCCCGTTATCAT > NZ_CP034943/3035972‑3036238 | tAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGAGTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGATTGGAAATCCGGCGATcc > 2:2120247/1‑140 (MQ=255) tgtTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTCTCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTtg > 1:591195/1‑140 (MQ=255) tgtTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTTCTGCACATCTGCTTTATTTTGTTTCCTATTCTTCTTTACCAAGTGTTTTGGCTTGGAAAACCTGCGATTCTtg > 1:2374105/1‑140 (MQ=255) tgtTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTTCTGCACATCTGCTTTATTTTGTTTCCTATTCTTCTTTACCAAGTGTTTTGGCTTGGAAAACCTGCGATTCTtg > 1:668707/1‑140 (MQ=255) tgtTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTTCTGCACATCTGCTTTATTTTGTTTCCTATTCTTCTTTACCAAGTGTTTTGGCTTGGAAAACCTGCGATTCTtg > 1:2374122/1‑140 (MQ=255) tgtTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTtg > 1:722852/1‑140 (MQ=255) ataataGATTCTTATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGcc > 1:598067/1‑140 (MQ=255) ataataGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATGTGCTTTATTTTGTTTCCTCTTCTTCTCTACCAAGTGTTTTGGCTTGGATAGCCGGCGAGCCTTGTGcc > 1:1544879/1‑140 (MQ=255) ataataGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGcc > 1:2147085/1‑140 (MQ=255) ataataGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGcc > 1:1857438/1‑140 (MQ=255) ataataGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGcc > 1:1737361/1‑140 (MQ=255) ataataGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGcc > 2:1716852/1‑140 (MQ=255) gATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAAt > 1:369536/1‑140 (MQ=255) gATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAAt > 1:2399023/1‑140 (MQ=255) gATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAAt > 1:479822/1‑140 (MQ=255) gATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCGATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAAt > 1:389148/1‑140 (MQ=255) ttCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAATCCGGCGATCCTTGTGCCCAAAATaa > 2:2008130/1‑140 (MQ=255) ttCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATaa > 2:588294/1‑140 (MQ=255) tatTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAg > 2:1140911/1‑140 (MQ=255) tatTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAg > 2:569954/1‑140 (MQ=255) ttttATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCg < 2:2147085/140‑1 (MQ=255) tcttcGACAGCATTTCACAAGAATCGCAATTCAACAAGACTATCTCCTGCATATCTGATTTATTGTGTTTCCTATTCTGCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCGAAAATAAACAGCGGGt < 1:666624/136‑1 (MQ=255) tataCGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGt > 1:2044832/1‑140 (MQ=255) tataCGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGt > 2:438402/1‑140 (MQ=255) tataCGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGt > 1:834876/1‑140 (MQ=255) cGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTCCCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGt < 1:733801/140‑1 (MQ=255) cGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGt < 1:2139558/140‑1 (MQ=255) cGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGt < 2:2399023/140‑1 (MQ=255) cGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGt < 2:479822/140‑1 (MQ=255) aaGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCAc > 1:745009/1‑140 (MQ=255) aaGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCAc > 1:2022106/1‑140 (MQ=255) gATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTATACCAAGGGTTTTGGCTTGGAAAGCCGGCGCTCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGtt > 2:1244072/1‑140 (MQ=255) gAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTgc > 2:2106584/1‑140 (MQ=255) aTGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTgcgg < 1:914532/140‑1 (MQ=255) aTGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTgcgg < 1:914612/140‑1 (MQ=255) aaTTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCt < 1:2187750/140‑1 (MQ=255) aGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTAt < 2:722852/140‑1 (MQ=255) gACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATg < 2:1162111/140‑1 (MQ=255) aCTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGc < 2:1574794/140‑1 (MQ=255) cTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCa < 1:1102583/140‑1 (MQ=255) cTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCa < 1:494501/140‑1 (MQ=255) tctcCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCgg > 1:1001412/1‑96 (MQ=255) tctcCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCgg < 2:1001412/96‑1 (MQ=255) gCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTcc > 1:2039331/1‑140 (MQ=255) gCACATCTGCTTTATTTTGTTTCCTATTCTTCTTTACCAAGTGTTTTGGCTTGGAAAACCTGCGATTCTTGTGCCAAAAATAAACAGCGGTTTGGTCACGCTCTTCGCCTGCGGCGCCTCCGTTTTATGCATTATTTTcc < 2:668707/140‑1 (MQ=255) gCACATCTGCTCTATTTTGTTTCCTATTCTTCTTTACCAAGTGTTTTGGCTTGGAAAACCTGCGATTCTTGTGCCAAAAATAAACAGCGGTTTGGTCACGCTCTTCGCCTGCGGCGCCTCCGTTTTATGCATTATTTTcc < 2:2374122/140‑1 (MQ=255) cATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCCAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTccc < 2:66822/140‑1 (MQ=255) cATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTccc < 2:64825/140‑1 (MQ=255) cATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTccc > 2:385100/1‑140 (MQ=255) atCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGCGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTAt > 1:1190890/1‑140 (MQ=255) gCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCAt > 2:1149787/1‑140 (MQ=255) gtttATTTTGTTTCCTATTCTTCTCTACCCAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATg < 1:898419/139‑1 (MQ=255) cTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATAtt < 1:1612121/129‑1 (MQ=255) cTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATAtt > 2:1612121/1‑129 (MQ=255) cTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATg > 2:85061/1‑140 (MQ=255) cTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATg > 2:924649/1‑140 (MQ=255) ttATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGaa < 1:624820/140‑1 (MQ=255) ttATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGaa < 1:1871173/140‑1 (MQ=255) ttATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGaa < 1:385100/140‑1 (MQ=255) aTTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAAt < 2:226221/140‑1 (MQ=255) ttttGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAATCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCTCCTCCGTTTTATGCATTATATTCACTATTCATGAAATg > 1:170832/1‑140 (MQ=255) ttttGTTTCCTATTCTTATCTACCAAGTGTTTTGGCTTGGAAATCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATg > 1:338402/1‑140 (MQ=255) ttGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGa < 1:924649/140‑1 (MQ=255) ttGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGa < 1:1029076/140‑1 (MQ=255) ttGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGa < 1:1140911/140‑1 (MQ=255) ttGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGa < 1:1500208/140‑1 (MQ=255) ttGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGa < 2:304886/140‑1 (MQ=255) ttGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGa < 2:294978/140‑1 (MQ=255) ttGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGa < 2:1865884/140‑1 (MQ=255) ttGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGa < 1:588294/140‑1 (MQ=255) ttGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGa < 1:569954/140‑1 (MQ=255) ttGTTTCCTATTCGTCTCTACCAAGTGTTTTGGCTAGGAAAGCCGGCGAGCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCTCTTGCGGCGCCTCCGTTTTATGCATTATAGTCCCGAGTCCTGAAATGGa < 2:1967710/140‑1 (MQ=255) gTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACt < 1:1471002/140‑1 (MQ=255) gTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACt < 2:745009/140‑1 (MQ=255) gTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACt < 2:2022106/140‑1 (MQ=255) gTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACt < 1:1764723/140‑1 (MQ=255) tttCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACta > 1:55686/1‑140 (MQ=255) tttCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACta > 1:332939/1‑140 (MQ=255) tttCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACta > 1:1267534/1‑140 (MQ=255) gttCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTAGTCATGAACTGGACta > 1:1389793/2‑140 (MQ=255) tCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACtaca < 1:1225025/140‑1 (MQ=255) tCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACtaca < 1:1149787/140‑1 (MQ=255) ccTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACtacat < 1:993964/140‑1 (MQ=255) ctctACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGaa < 1:1469497/120‑1 (MQ=255) ctctACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGaa > 2:1469497/1‑120 (MQ=255) ctctACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAAt > 1:1861342/1‑122 (MQ=255) ctctACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAAt < 2:1861342/122‑1 (MQ=255) ctctACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACTACATACAATACgg > 1:2151184/1‑140 (MQ=255) aCCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACTACATACAATACGGCCtt < 1:1939974/140‑1 (MQ=255) aGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACtaca < 1:820799/122‑1 (MQ=255) aGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACtaca < 1:189727/122‑1 (MQ=255) aGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACtaca > 2:820799/1‑122 (MQ=255) aGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACtaca > 2:189727/1‑122 (MQ=255) aGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACTACATACAATACGGCCTTCAga > 1:2387659/1‑140 (MQ=255) aGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACTACATACAATACGGCCTTCAga > 1:1869552/1‑140 (MQ=255) tGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACTACATACAATACGGCCTTCAGATGATTcc > 2:650457/1‑140 (MQ=255) tGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGttt < 1:1328938/74‑1 (MQ=255) tGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGttt > 2:1328938/1‑74 (MQ=255) tGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACTACATACAATACGGCCTTCAGATGATTCCCGTTa > 1:1652343/1‑140 (MQ=255) aaGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACTACATACAATACGGCCTTCAGATGATTCCCGTTATCAt < 1:47463/140‑1 (MQ=255) | TAGTGTTATAATAGATTCATATTTTATACGAAAGGATTTCACACGAATGGAAATTCTAAAAGACTATCTCCTGCATATCTGCTTTATTTTGTTTCCTATTCTTCTCTACCAAGTGTTTTGGCTTGGAAAGCCGGCGATCCTTGTGCCCAAAATAAACAGCGGGTTGGTCACGTTATTCGCTTGCGGCGCCTCCGTTTTATGCATTATATTCCCTATTCATGAAATGGACTACATACAATACGGCCTTCAGATGATTCCCGTTATCAT > NZ_CP034943/3035972‑3036238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |