| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 480,215 | T→A | 5.5% | P116P (CCT→CCA) | EO946_RS02465 → | glycosyltransferase family 2 protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 480,215 | 0 | T | A | 5.5% | 715.5 / 21.7 | 217 | P116P (CCT→CCA) | EO946_RS02465 | glycosyltransferase family 2 protein |
| Reads supporting (aligned to +/- strand): ref base T (63/140); new base A (5/7); total (69/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.46e-01 | |||||||||||
Only 100 of 217 total aligned reads displayed.
ATGGTCAACCTTTATTATCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGATGAATGAC > NZ_CP034943/480078‑480353 | aTGGTCAACCTTTATTATCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTaa > 1:2174819/1‑140 (MQ=255)aTGGTCAACCTTTATTATCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTaa > 1:550734/1‑140 (MQ=255) ccagtattagCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTCTCAAAATGGTGATCACAAAACCGCCTAACGCCGGaa < 1:1540496/136‑1 (MQ=255) ccTTTATTATCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGaa < 2:859919/140‑1 (MQ=255) ccTTTATTATCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGaa < 1:2285910/140‑1 (MQ=255) ttattaTCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAg > 2:594970/1‑140 (MQ=255) ttattaTCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGACAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAg > 2:209832/1‑140 (MQ=255) attatCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGc < 2:1533747/140‑1 (MQ=255) tatCCGCAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCaa < 2:844731/140‑1 (MQ=255) tatCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCaa < 2:613957/140‑1 (MQ=255) cGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATcc > 2:2270102/1‑140 (MQ=255) cGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATcc > 2:68605/1‑140 (MQ=255) cGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATcc > 2:665030/1‑140 (MQ=255) gAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCct < 1:405051/140‑1 (MQ=255) aGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCctct > 1:1333191/1‑140 (MQ=255) aCCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCa < 2:2148109/140‑1 (MQ=255) aCCGTCTGGAGATTAGTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCa < 1:2038252/140‑1 (MQ=255) cGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACt < 2:278392/140‑1 (MQ=255) cGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACt < 2:2210632/140‑1 (MQ=255) cGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACt < 1:485885/140‑1 (MQ=255) gTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTg > 1:563903/1‑140 (MQ=255) attGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGAtt > 1:136661/1‑140 (MQ=255) cGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGa > 2:1256500/1‑140 (MQ=255) tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAATGGCCAATCCTCTGCACTGAACGCTGGATTTGCCGAATCGAACg > 2:1583271/1‑140 (MQ=255) tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg > 2:1342597/1‑140 (MQ=255) tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg < 2:1805445/140‑1 (MQ=255) tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg < 2:1337376/140‑1 (MQ=255) tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg > 2:36608/1‑140 (MQ=255) tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg < 1:1406307/140‑1 (MQ=255) tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg < 2:600572/140‑1 (MQ=255) tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg < 2:782485/140‑1 (MQ=255) tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg < 2:2041586/140‑1 (MQ=255) tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGAAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg < 2:1227948/140‑1 (MQ=255) aTTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGc < 1:2023600/140‑1 (MQ=255) cttcAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGAt < 2:1505747/140‑1 (MQ=255) cAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGAtgtg > 1:802206/1‑140 (MQ=255) gACCGGACGTGTGATATAGTCAATGAATTGTCCGAGATATTCGTTTTTATCAAAATGGTGATCACAAAACCGCCTAACTCAGGAAATGGCAAATCCTCTGCACTGAACTTTGGATTTGCCGAATCGAACGGCGATGTGAt < 1:209832/140‑1 (MQ=255) gACCGGACGGGTGATATCGTCAATGAATTTTCCGATAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt < 1:2223548/140‑1 (MQ=255) gACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTCTCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt < 2:263842/140‑1 (MQ=255) gACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt < 1:594970/140‑1 (MQ=255) gACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt < 2:1893868/140‑1 (MQ=255) gACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt < 1:68605/140‑1 (MQ=255) gACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt < 1:2270102/140‑1 (MQ=255) aCCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATc > 2:1617355/1‑140 (MQ=255) aCCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATc < 2:1389216/140‑1 (MQ=255) ccGGACGGGTGATATCGTCAATGACTGTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCt < 2:307601/140‑1 (MQ=255) ccGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCt < 2:514138/140‑1 (MQ=255) aCGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCtgt > 2:549214/1‑138 (MQ=255) tGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATg < 2:446159/140‑1 (MQ=255) tGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATg < 2:2433577/140‑1 (MQ=255) tGATATCGTCAATGAATTTTCCGAGAAATACGATTTCATCAAAATGGTGATTACGAAGCCGCCAAATGCAGGAAAAGGAAAATCCTCTGCACTTAACTCGGGTTTTGCCGAATCGAACGGCGATGTGATCTGTGTGTATg > 2:337913/1‑140 (MQ=255) tGATATCGTCAATGAATTTTCCGAGAAATACGATTTCATCAAAATGGTGATTACGAAGCCGCCAAATGCAGGAAAAGGAAAATCCTCTGCACTTAACTCGGGTTTTGCCGAATCGAACGGCGATGTGATCTGTGTGTATg > 2:774784/1‑140 (MQ=255) atCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGc > 1:2088631/1‑140 (MQ=255) atCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGc > 1:1636737/1‑140 (MQ=255) tCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt > 2:1143662/1‑124 (MQ=255) tCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt < 1:1143662/124‑1 (MQ=255) tCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGcc < 1:606107/140‑1 (MQ=255) tCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGcc < 1:566044/140‑1 (MQ=255) tCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGcc > 1:376441/1‑140 (MQ=255) gTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGa > 1:2013280/1‑140 (MQ=255) cAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGAtgt < 1:780111/117‑1 (MQ=255) cAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGAtgt > 2:164255/1‑117 (MQ=255) aaTGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGacaa < 2:1168520/140‑1 (MQ=255) aaTGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGacaa < 2:441544/140‑1 (MQ=255) aaTGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGacaa < 2:938315/140‑1 (MQ=255) aaTGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGacaa < 1:2212856/140‑1 (MQ=255) aaTGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGacaa < 1:2409949/140‑1 (MQ=255) tttCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt < 1:956596/112‑1 (MQ=255) gacaTACGATTTTATCAAAATGGTGATCACAAAACCGCCGAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGCCGCCGACAACACCCCTGAGaaaa < 2:2121749/137‑1 (MQ=255) gaAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATTTGATCTGTGTATATGACGCCGACAACACCCCTGAGaaaa < 2:2408884/140‑1 (MQ=255) gaAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGaaaa < 2:1990496/140‑1 (MQ=255) aTACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATgg < 1:1256500/140‑1 (MQ=255) aTACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATgg < 2:1124876/140‑1 (MQ=255) aTACGATTTCATCAAAATGGTGATTACGAAGCCGCCAAATGCAGGAAAAGGAAAATCCTCTGCACTTAACTCGGGTTTTGCCGAATCGAACGGCGATGTGATCTGTGTGTATGACGCCGACAACACGCCTGAGAAAATgg < 2:1595697/140‑1 (MQ=255) aCGATTTTATCAAAATGGTGATCACAAAACCGCCTACCGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc < 2:1926079/140‑1 (MQ=255) aCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc < 1:177184/140‑1 (MQ=255) aCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc < 1:1921552/140‑1 (MQ=255) aCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc < 2:2061970/140‑1 (MQ=255) aCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc < 2:2349688/140‑1 (MQ=255) aCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAAGCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc < 1:35457/140‑1 (MQ=255) tttATCAAAATGGTGATCACAAACCCGCCTAACGCCGGACAAGGCAAATCCTCTGCACTGAACTCTGGACTTGCCTAATCGAACGCCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTa < 1:2075568/140‑1 (MQ=255) tttATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTa < 1:1831337/140‑1 (MQ=255) tttATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTa < 1:764578/140‑1 (MQ=255) tttATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTa < 1:1479201/140‑1 (MQ=255) ttATCAAAATGGTGATCAAAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTAt < 1:244588/140‑1 (MQ=255) tATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTAtt < 1:390501/140‑1 (MQ=255) tATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTAtt < 1:2263929/140‑1 (MQ=255) tATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTAtt < 1:1016947/140‑1 (MQ=255) aaaaTGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCt < 1:905327/140‑1 (MQ=255) gTGATCACAAAACCGCCTACCGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCt < 2:573366/140‑1 (MQ=255) gTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCt < 1:508559/140‑1 (MQ=255) gTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCt < 1:301959/140‑1 (MQ=255) tGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTc > 1:1054972/1‑140 (MQ=255) aTCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATGTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCgg > 1:2047897/1‑140 (MQ=255) aTCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCgg > 1:143106/1‑140 (MQ=255) aaaaCCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCtga > 2:173598/1‑140 (MQ=255) ccGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGatgaa < 2:1054972/140‑1 (MQ=255) ccGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGatgaa < 2:2165847/140‑1 (MQ=255) ccTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGatgaatga > 2:1904856/1‑140 (MQ=255) cTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGATGAATGAc > 2:14609/1‑140 (MQ=255) | ATGGTCAACCTTTATTATCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGATGAATGAC > NZ_CP034943/480078‑480353 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |