| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,212,247 | C→T | 6.0% | A129A (GCG→GCA) | EO946_RS16630 ← | ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,212,247 | 0 | C | T | 6.0% | 479.1 / 13.2 | 149 | A129A (GCG→GCA) | EO946_RS16630 | ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (82/57); new base T (5/4); total (87/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 167 total aligned reads displayed.
CTGATCGGCTTTTTTCTCTGCCCCGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGACACCGACCA > NZ_CP034943/3212109‑3212386 | cTGATCGGCTTTTTTCTCTGCCCCGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCcgctgacg < 2:453247/140‑1 (MQ=255)cTGATCGGCTTTTTTCTCTGCCCCGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCcgctgacg < 2:682679/140‑1 (MQ=255)cTGATCGGCTTTTTTCTCTGCCCCGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCcgctgacg < 1:1851234/140‑1 (MQ=255) cTTTTTTCTCTGCCCCGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATg < 2:1768377/140‑1 (MQ=255) cTTTTTTCTCTGCCCCGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATg < 2:1363875/140‑1 (MQ=255) ttttCTCTGCCCCGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGaa > 1:122761/1‑140 (MQ=255) ttttCTCTGCCCCGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCAGCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGaa > 1:124074/1‑140 (MQ=255) ttCTCTGCCCCGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGa > 2:572731/1‑140 (MQ=255) ctGCCCCGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCa > 1:2305417/1‑140 (MQ=255) tGCCCCGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCAt > 1:1478898/1‑140 (MQ=255) tGCCCCGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCAt > 1:1682845/1‑140 (MQ=255) tGCCCCGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGATTGATGGCATACGCTGACGCTGACATGGAAGACTCAt > 1:1300826/1‑140 (MQ=255) cGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCa < 1:600076/140‑1 (MQ=255) ccGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATc < 2:1079377/140‑1 (MQ=255) ttGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGaa > 1:382689/1‑140 (MQ=255) ttGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGaa > 1:1979657/1‑140 (MQ=255) acCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTtctc < 1:1418592/140‑1 (MQ=255) acCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTtctc < 1:2410365/140‑1 (MQ=255) acCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTtctc < 1:2329369/140‑1 (MQ=255) acCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTtctc < 1:1195875/140‑1 (MQ=255) acCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTtctc < 1:166400/140‑1 (MQ=255) cTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCaa > 1:1593177/1‑140 (MQ=255) cGGAGAATGATTGTGCATCATTGACAGTCAGCACTGTAATGCCCGCGTCCTTCAGCTGTTTGATGGCATCCGCTGATGCTGACATGGAAGACTCATGGGCCAGAACGAGATCTGGTTTTAGAGAAATGACTTTTTCAACg > 2:852804/1‑140 (MQ=255) cGGAGAATGATTGTGCATCATTGACAGTCAGCACTGTAATGCCCGCGTCCTTCAGCTGTTTGATGGCATCCGCTGATGCTGACATGGAAGACTCATGGGCCAGAACGAGATCTGGTTTTAGAGAAATGACTTTTTCAACg > 2:1156812/1‑140 (MQ=255) cGGAGAATGATTGTGCATCATTGACAGTCAGCACTGTAATGCCCGCGTCCTTCAGCTGTTTGATGGCATCCGCTGATGCTGACATGGAAGACTCATGGGCCAGAACGAGATCTGGTTTTAGAGAAATGACTTTTTCAACg > 2:686385/1‑140 (MQ=255) cGGAGAATGATTGTGCATCATTGACAGTCAGCACTGTAATGCCCGCGTCCTTCAGCTGTTTGATGGCATCCGCTGATGCTGACATGGAAGACTCATGGGCCAGAACGAGATCTGGTTTTAGAGAAATGACTTTTTCAACg > 2:1963689/1‑140 (MQ=255) cGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCaatg > 1:513485/1‑138 (MQ=255) cGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACg > 2:644948/1‑140 (MQ=255) cGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACg > 2:1293977/1‑140 (MQ=255) cGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACg > 2:1223086/1‑140 (MQ=255) gAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGtt > 2:2319054/1‑140 (MQ=255) gAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGtt < 1:1568459/140‑1 (MQ=255) aTGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACa < 2:1869127/140‑1 (MQ=255) gATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACAtt > 1:2301315/1‑140 (MQ=255) ttGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCa < 1:2256865/140‑1 (MQ=255) ttGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCa < 1:893654/140‑1 (MQ=255) ttGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCa < 2:1797688/140‑1 (MQ=255) ttGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCa < 1:1521002/140‑1 (MQ=255) cGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCg > 1:811177/1‑140 (MQ=255) cGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCg > 1:2067349/1‑140 (MQ=255) gTTGACAGTCAGCACGTTAATGCCCGCGTCTCTCAGCTGTTTGATTGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGTGATCCGGCTTTAGAGAAATGACTTTCTAAACGTTTACATTCATATCTCCGa < 1:1560102/140‑1 (MQ=255) ttGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATc > 2:2311530/1‑92 (MQ=255) tCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCa < 2:122720/140‑1 (MQ=255) tCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCa < 2:124074/140‑1 (MQ=255) cAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTGaa > 1:1899090/1‑140 (MQ=255) gCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAAcc > 1:699439/1‑140 (MQ=255) tGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCa > 1:1792595/1‑111 (MQ=255) tGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCa > 1:1036831/1‑111 (MQ=255) tGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCa > 1:556876/1‑111 (MQ=255) tGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCa < 2:556876/111‑1 (MQ=255) tGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACt < 2:1098572/140‑1 (MQ=255) cccGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCttttt > 2:2377869/1‑134 (MQ=255) cccGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCttttt < 1:2377869/134‑1 (MQ=255) cccGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTc > 1:2143854/1‑140 (MQ=255) cccGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTc > 2:216338/1‑140 (MQ=255) cccGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTc > 1:408880/1‑140 (MQ=255) cccGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATACATAGATCCTACCTGCGAAACCTTTTTGACTTc > 2:775229/1‑140 (MQ=255) cccGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGAATTTCTCAACGTTTACATTCATATCTCGGACCTTCTCAACCTGTTTGAGTTc > 1:378748/1‑140 (MQ=255) gcgTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCTACCTTTTTGACTTCCtt > 1:549862/1‑140 (MQ=255) gTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGtt < 2:403850/96‑1 (MQ=255) gTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGAGTTCCGTTg > 1:112711/1‑140 (MQ=255) gTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTg > 1:359704/1‑140 (MQ=255) gTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTg < 1:993604/140‑1 (MQ=255) gTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTg > 1:1745636/1‑140 (MQ=255) tctctcAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTgg < 2:607737/140‑1 (MQ=255) ctctcAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGa < 2:408880/140‑1 (MQ=255) ccttcAGCTGTTTGATGGCATCCGCTGATGCTGACATGGAAGACTCATGGGCCAGAACGAGATCTGGTTTTAGAGAAATGACTTTTTCAACGTTTACATTCATATCTCCGACTTTCTCAACCTTTTTGACTTCCTTTGGa < 1:852804/137‑1 (MQ=255) ccttcAGCTGTTTGATGGCATCCGCTGATGCTGACATGGAAGACTCATGGGCCAGAACGAGATCTGGTTTTAGAGAAATGACTTTTTCAACGTTTACATTCATATCTCCGACTTTCTCAACCTTTTTGACTTCCTTTGGa < 1:686385/137‑1 (MQ=255) ccttcAGCTGTTTGATGGCATCCGCTGATGCTGACATGGAAGACTCATGGGCCAGAACGAGATCTGGTTTTAGAGAAATGACTTTTTCAACGTTTACATTCATATCTCCGACTTTCTCAACCTTTTTGACTTCCTTTGGa < 1:1963689/137‑1 (MQ=255) ccttcAGCTGTTTGATGGCATCCGCTGATGCTGACATGGAAGACTCATGGGCCAGAACGAGATCTGGTTTTAGAGAAATGACTTTTTCAACGTTTACATTCATATCTCCGACTTTCTCAACCTTTTTGACTTCCTTTGGa < 1:1156812/137‑1 (MQ=255) tctcAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGat < 2:2187550/140‑1 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGAc < 2:620195/120‑1 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGAc > 1:620195/1‑120 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGt > 1:1037400/1‑140 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGt > 1:2175800/1‑140 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGt > 1:273641/1‑140 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGt > 2:1032153/1‑140 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGt > 1:782907/1‑140 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCAGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGt > 2:2259217/1‑140 (MQ=255) ttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt < 2:1292466/140‑1 (MQ=255) ttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt < 2:2299821/140‑1 (MQ=255) ttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt < 2:2305417/140‑1 (MQ=255) ttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt < 2:556494/140‑1 (MQ=255) ttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt < 2:1700518/140‑1 (MQ=255) atGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt < 2:1655853/139‑1 (MQ=255) tGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTa < 1:2314335/134‑1 (MQ=255) tGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGttt > 1:753293/1‑140 (MQ=255) tGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGttt > 1:1104269/1‑140 (MQ=255) tGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt < 1:71945/139‑1 (MQ=255) tGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt > 2:1521909/1‑139 (MQ=255) tCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGac > 1:270190/1‑140 (MQ=255) tCCGCTGACGCTGACATGGAAGACTCATGAGAAAGAACGAGATCCGGCTTTAGAGAAATGACTTTATCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTGGGTGGTGac > 2:1579465/1‑140 (MQ=255) cgctgacgctgaCATGGAAGACTCATGAGCAATAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGacac > 2:550190/1‑140 (MQ=255) cgctgacgctgaCATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGacac > 2:277443/1‑140 (MQ=255) cgctgacgctgaCATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGacac < 2:273641/140‑1 (MQ=255) cgctgacgctgaCATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGacac < 2:2317953/140‑1 (MQ=255) cgctgacgctgaCATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGacac > 2:2184254/1‑140 (MQ=255) cgctgacgctgaCATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGacac > 2:1519919/1‑140 (MQ=255) cgctcacgctgaCATGGAAGACTCATGAGCAAGAACGAGATACGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTACCTTTGGATATGTATCGTTTGTGGTGacaa > 2:1799433/1‑139 (MQ=255) ctgacgctgacATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTTGTGACACCg > 2:1997452/1‑140 (MQ=255) | CTGATCGGCTTTTTTCTCTGCCCCGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGACACCGACCA > NZ_CP034943/3212109‑3212386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |