| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,212,271 | A→C | 5.3% | L121L (CTT→CTG) | EO946_RS16630 ← | ABC transporter substrate‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,212,271 | 0 | A | C | 5.3% | 553.5 / 12.7 | 170 | L121L (CTT→CTG) | EO946_RS16630 | ABC transporter substrate‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (95/66); new base C (5/4); total (100/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.95e-01 | |||||||||||
Only 100 of 172 total aligned reads displayed.
CGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGACACCGACCACTTTGTCACCGAGACCGAGAGCG > NZ_CP034943/3212132‑3212409 | cGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCa < 1:600076/140‑1 (MQ=255) ccGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATc < 2:1079377/140‑1 (MQ=255) ttGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGaa > 1:1979657/1‑140 (MQ=255) acCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTtctc < 1:1195875/140‑1 (MQ=255) acCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTtctc < 1:1342732/140‑1 (MQ=255) acCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTtctc < 1:2410365/140‑1 (MQ=255) cTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCaa > 1:1629780/1‑140 (MQ=255) cGGAGAATGATTGTGCATCATTGACAGTCAGCACTGTAATGCCCGCGTCCTTCAGCTGTTTGATGGCATCCGCTGATGCTGACATGGAAGACTCATGGGCCAGAACGAGATCTGGTTTTAGAGAAATGACTTTTTCAACg > 2:852804/1‑140 (MQ=255) cGGAGAATGATTGTGCATCATTGACAGTCAGCACTGTAATGCCCGCGTCCTTCAGCTGTTTGATGGCATCCGCTGATGCTGACATGGAAGACTCATGGGCCAGAACGAGATCTGGTTTTAGAGAAATGACTTTTTCAACg > 2:686385/1‑140 (MQ=255) cGGAGAATGATTGTGCATCATTGACAGTCAGCACTGTAATGCCCGCGTCCTTCAGCTGTTTGATGGCATCCGCTGATGCTGACATGGAAGACTCATGGGCCAGAACGAGATCTGGTTTTAGAGAAATGACTTTTTCAACg > 2:1156812/1‑140 (MQ=255) cGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACg > 1:2115711/1‑140 (MQ=255) cGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACg > 2:1293977/1‑140 (MQ=255) cGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACg > 1:1572564/1‑140 (MQ=255) cGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACg > 2:644948/1‑140 (MQ=255) gAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGtt > 2:2319291/1‑140 (MQ=255) aTGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACa < 2:158853/140‑1 (MQ=255) gATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACAtt > 1:2301315/1‑140 (MQ=255) ttGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCa < 1:893654/140‑1 (MQ=255) ttGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCa < 2:1797688/140‑1 (MQ=255) ttGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCa < 1:2256865/140‑1 (MQ=255) cGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCg > 1:2067349/1‑140 (MQ=255) gTTGACAGTCAGCACGTTAATGCCCGCGTCTCTCAGCTGTTTGATTGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGTGATCCGGCTTTAGAGAAATGACTTTCTAAACGTTTACATTCATATCTCCGa < 1:1560102/140‑1 (MQ=255) gTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGa < 1:1942967/140‑1 (MQ=255) ttGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATc < 1:2311530/92‑1 (MQ=255) ttGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATc > 2:2311530/1‑92 (MQ=255) aGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTtct > 1:1733669/1‑140 (MQ=255) tCAGCTCGGTAATGCCAGCGTCTCTCAGCTGTTTGATGGCATACGCTGAAGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCa < 2:122761/140‑1 (MQ=255) tCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCa < 2:122720/140‑1 (MQ=255) gCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAACTGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAAcc > 1:1494233/1‑140 (MQ=255) gCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAAcc > 2:796173/1‑140 (MQ=255) tGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCa > 1:1792595/1‑111 (MQ=255) tGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCa > 1:1036831/1‑111 (MQ=255) tGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCa > 1:556876/1‑111 (MQ=255) tGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCa < 2:1792595/111‑1 (MQ=255) cccGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGAt > 1:643529/1‑70 (MQ=255) cccGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCttttt < 1:2377869/134‑1 (MQ=255) cccGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCttttt > 2:2377869/1‑134 (MQ=255) cccGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTc > 1:408880/1‑140 (MQ=255) cccGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGAATTTCTCAACGTTTACATTCATATCTCGGACCTTCTCAACCTGTTTGAGTTc > 1:378748/1‑140 (MQ=255) gcgTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCTACCTTTTTGACTTCCtt > 1:549862/1‑140 (MQ=255) gTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGATATCCGGCTTTAGAGAAAAGACTTTCTCAACGATTACATTCATATCTCAGACCTTCTCAACATTTTTGACTTCATTTg > 2:373479/1‑140 (MQ=255) gTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGtt > 1:403850/1‑96 (MQ=255) gTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGAGTTCCGTTg > 1:112711/1‑140 (MQ=255) gTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTg < 1:993604/140‑1 (MQ=255) gTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTg > 1:1745636/1‑140 (MQ=255) gTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTg > 1:359704/1‑140 (MQ=255) tctctcAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTgg < 2:2180460/140‑1 (MQ=255) tctctcAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTgg < 2:607737/140‑1 (MQ=255) ccttcAGCTGTTTGATGGCATCCGCTGATGCTGACATGGAAGACTCATGGGCCAGAACGAGATCTGGTTTTAGAGAAATGACTTTTTCAACGTTTACATTCATATCTCCGACTTTCTCAACCTTTTTGACTTCCTTTGGa < 1:1156812/137‑1 (MQ=255) ccttcAGCTGTTTGATGGCATCCGCTGATGCTGACATGGAAGACTCATGGGCCAGAACGAGATCTGGTTTTAGAGAAATGACTTTTTCAACGTTTACATTCATATCTCCGACTTTCTCAACCTTTTTGACTTCCTTTGGa < 1:686385/137‑1 (MQ=255) tctcAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGat < 2:2187550/140‑1 (MQ=255) tctcAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGat < 2:2187728/140‑1 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGAc < 2:620195/120‑1 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGt > 1:1037400/1‑140 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGt > 2:1913970/1‑140 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGt > 1:2175800/1‑140 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGt > 1:782907/1‑140 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGt > 2:1032153/1‑140 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACATTCTCAACCTTTTTGACTTAATTTGGATATGTATCGt > 1:294922/1‑140 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCAGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGt > 2:2259217/1‑140 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCGCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGt > 1:2317953/1‑140 (MQ=255) tttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGATTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCATTTGGATATGTATCGt > 2:404740/1‑140 (MQ=255) ttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAATGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt < 2:513485/140‑1 (MQ=255) ttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt < 2:563487/140‑1 (MQ=255) ttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt < 2:2305417/140‑1 (MQ=255) ttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt < 2:2299821/140‑1 (MQ=255) ttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt < 2:556494/140‑1 (MQ=255) ttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt < 2:1700518/140‑1 (MQ=255) ttGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt < 2:11096/140‑1 (MQ=255) tGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGa < 1:1856479/69‑1 (MQ=255) tGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGa > 2:1856479/1‑69 (MQ=255) tGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGttt > 1:1104269/1‑140 (MQ=255) tGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGttt > 1:753293/1‑140 (MQ=255) tGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt < 1:71945/139‑1 (MQ=255) tGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt > 2:71945/1‑139 (MQ=255) tGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt < 1:1266034/139‑1 (MQ=255) tGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt > 2:1521909/1‑139 (MQ=255) tGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt < 1:1521909/139‑1 (MQ=255) tGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGtt > 2:1266034/1‑139 (MQ=255) tCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGac > 1:694640/1‑140 (MQ=255) tCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGac > 1:270190/1‑140 (MQ=255) tCCGCTGACGCTGACATGGAAGACTCATGAGAAAGAACGAGATCCGGCTTTAGAGAAATGACTTTATCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTGGGTGGTGac > 2:1579465/1‑140 (MQ=255) cgctgacgctgaCATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGacac > 2:550752/1‑140 (MQ=255) cgctgacgctgaCATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGacac < 2:2317953/140‑1 (MQ=255) cgctgacgctgaCATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGacac < 2:273641/140‑1 (MQ=255) ctgacgctgacATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTTGTGACACCg > 2:1997452/1‑140 (MQ=255) acgctgacATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAACTGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGACACCGAcc > 1:813820/1‑140 (MQ=255) cgctgacATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGACACCGACCa < 2:2115711/140‑1 (MQ=255) aaGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGACACCGACCACTTTGTCaccg > 1:1859600/1‑140 (MQ=255) aaGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGACACCGACCACTTTGTCaccg > 1:798370/1‑140 (MQ=255) aaGACTCATGAGAAAGAACGAGATCCGGCTTTAGATAAATGACTTTATCAACGTTTACAATCATATCTCCGACCTTCTCAACCTTGTTGACTTCCTTTGGATATGTATCGTTTGTGGTGACACCGACCACTTTGTCaccg > 1:471779/1‑140 (MQ=255) aGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGACACCGACCACTTTGTCaccga < 1:1366491/140‑1 (MQ=255) aGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGACACCGACCACTTTGTCaccga < 1:2390705/140‑1 (MQ=255) aGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGACACCGACCACTTTGTCaccga < 2:1979657/140‑1 (MQ=255) aGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGACACCGACCACTTTGTCaccga < 2:770473/140‑1 (MQ=255) cTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGACACCGAACACTTTGTCaccgagac > 2:1127202/1‑140 (MQ=255) cTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAAACTTTTTGACTTCGTTTGGATATGTATCGTTTGTGGTGACACCGACCACTTTGTCaccgagac > 2:1294074/1‑140 (MQ=255) cTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTAATATCTCCGACCTTCTCAACCTTATTGACTTCCTGTGGATATGTATCGTTTGTGGTGAGACCGACCACTTTGTCaccgagac > 2:1209737/1‑140 (MQ=255) cATGAGCAAGAACGAGTTCCGGCTTTAGAGAAATGACTTTCTCAACGTTTAAATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGAAACAGACCACTTTGTCaccgagaacg > 2:330562/1‑140 (MQ=255) cAAGAACGAGATCCGGCTTTAGAGAAATGACTGTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGACACCGACCACTTTGTCACCGAGACCGAGAGCg < 2:1417133/140‑1 (MQ=255) | CGGCAGCTTCTCCGATCATTTCAATTGATTTGTACACCTCGGAAAATGATTGTGCATCGTTGACAGTCAGCACGGTAATGCCCGCGTCTCTCAGCTGTTTGATGGCATCCGCTGACGCTGACATGGAAGACTCATGAGCAAGAACGAGATCCGGCTTTAGAGAAATGACTTTCTCAACGTTTACATTCATATCTCCGACCTTCTCAACCTTTTTGACTTCCTTTGGATATGTATCGTTTGTGGTGACACCGACCACTTTGTCACCGAGACCGAGAGCG > NZ_CP034943/3212132‑3212409 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |