| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 480,218 | C→T | 5.7% | N117N (AAC→AAT) | EO946_RS02465 → | glycosyltransferase family 2 protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 480,218 | 0 | C | T | 5.7% | 678.5 / 17.9 | 208 | N117N (AAC→AAT) | EO946_RS02465 | glycosyltransferase family 2 protein |
| Reads supporting (aligned to +/- strand): ref base C (54/141); new base T (5/7); total (60/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 209 total aligned reads displayed.
CCTTTATTATCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGATGAATGACGAAA > NZ_CP034943/480086‑480357 | ccTTTATTATCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGaa < 2:859919/140‑1 (MQ=255)ccTTTATTATCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGaa < 1:2285910/140‑1 (MQ=255) ttattaTCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGACAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAg > 2:209832/1‑140 (MQ=255) ttattaTCCGAAGGACAGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAg > 2:595029/1‑140 (MQ=255) attatCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGc < 2:1533747/140‑1 (MQ=255) attatCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGc < 2:578759/140‑1 (MQ=255) tatCCGCAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCaa < 2:844731/140‑1 (MQ=255) tatCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCaa < 1:359570/140‑1 (MQ=255) tatCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCaa < 2:1367622/140‑1 (MQ=255) tatCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCaa < 2:320526/140‑1 (MQ=255) cGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATcc > 2:2270102/1‑140 (MQ=255) cGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATAAAAATGGTGATCACAAAACCGCCTAAATCCGGAAAAGGCAAATcc > 2:357519/1‑140 (MQ=255) aGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCctct > 1:1333191/1‑140 (MQ=255) aCCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCa < 1:385548/140‑1 (MQ=255) aCCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCa < 2:404374/140‑1 (MQ=255) aCCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCa < 2:2148109/140‑1 (MQ=255) cggcTGGAGATTATCGTCGTTAATGATAATTCATCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTCATCAAAATGGTGATTACGAAGCCGCCAAATGCAGGAACAGGAAAATCCTCTGCACt > 1:565602/4‑140 (MQ=255) cggcTGGAGATTATCGTCGTTAATGATAATTCATCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTCATCAAAATGGTGATTACGAAGCCGCCAAATGCAGGAAAAGGAAAATCCTCTGCACt > 1:568637/4‑140 (MQ=255) cGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACt < 2:2210632/140‑1 (MQ=255) cGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACt < 2:442038/140‑1 (MQ=255) cGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACt < 1:485885/140‑1 (MQ=255) cGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACt < 2:278392/140‑1 (MQ=255) cGTCTGGAGATTATTGTGGTAAAAGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACt < 2:556692/140‑1 (MQ=255) attGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGAtt > 1:136661/1‑140 (MQ=255) tgGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGcc > 1:69252/1‑140 (MQ=255) tAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGTGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGaa > 2:1060727/1‑140 (MQ=255) cGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGa > 2:1256500/1‑140 (MQ=255) tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGACAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg > 2:1697202/1‑140 (MQ=255) tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg > 2:605074/1‑140 (MQ=255) tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg < 2:782485/140‑1 (MQ=255) tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg > 2:485944/1‑140 (MQ=255) tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGAAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg < 2:1227948/140‑1 (MQ=255) tAAGTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg < 2:1761932/140‑1 (MQ=255) tAAGTCGTCAGACCGGACGGCTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg < 2:1337456/140‑1 (MQ=255) aTTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGc < 1:2023600/140‑1 (MQ=255) cttcAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGAt < 2:1486599/140‑1 (MQ=255) cttcAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGAt < 2:2038326/140‑1 (MQ=255) cAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGAtgtg > 1:802206/1‑140 (MQ=255) gACCGGACGTGTGATATAGTCAATGAATTGTCCGAGATATTCGTTTTTATCAAAATGGTGATCACAAAACCGCCTAACTCAGGAAATGGCAAATCCTCTGCACTGAACTTTGGATTTGCCGAATCGAACGGCGATGTGAt < 1:209832/140‑1 (MQ=255) gACCGGACGGGTGATATCGTCAATGAATTTTCCGATAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt < 1:2223548/140‑1 (MQ=255) gACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTCTCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt < 2:263842/140‑1 (MQ=255) gACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt < 1:2270102/140‑1 (MQ=255) gACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt < 2:1893868/140‑1 (MQ=255) gACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCGGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt < 1:595029/140‑1 (MQ=255) ccGGACGGGTGATATCGTCAATGACTGTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCt < 2:307601/140‑1 (MQ=255) aCGGGTGATATCGTCAATGAATTTTCCGAGAAATGCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACGGACCTCTGGATTTGCCGCATCGAACGGCGATGTGATCtgtgg > 2:2396655/1‑139 (MQ=255) tGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATg < 2:693315/140‑1 (MQ=255) tGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATg < 2:515875/140‑1 (MQ=255) tGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATg < 1:2046599/140‑1 (MQ=255) tGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATg < 2:2433577/140‑1 (MQ=255) tGATATCGTCAATGAATTTTCCGAGAAATACGATTTCATCAAAATGGTGATTACGAAGCCGCCAAATGCAGGAAAAGGAAAATCCTCTGCACTTAACTCGGGTTTTGCCGAATCGAACGGCGATGTGATCTGTGTGTATg > 2:774784/1‑140 (MQ=255) tatCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACg < 2:2059340/140‑1 (MQ=255) atCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGc > 1:2088631/1‑140 (MQ=255) atCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGc > 1:1636737/1‑140 (MQ=255) tCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt > 2:1143662/1‑124 (MQ=255) tCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt < 1:1143662/124‑1 (MQ=255) gTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGa > 1:2013280/1‑140 (MQ=255) cAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGAtgt < 1:780111/117‑1 (MQ=255) aaTGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGacaa < 2:938315/140‑1 (MQ=255) aaTGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGacaa < 1:2409949/140‑1 (MQ=255) aaTGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGacaa < 2:1168520/140‑1 (MQ=255) aaTGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGacaa < 1:2212856/140‑1 (MQ=255) tttCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt < 1:956596/112‑1 (MQ=255) ttCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACACCTg > 1:1401569/1‑140 (MQ=255) gacaTACGATTTTATCAAAATGGTGATCACAAAACCGCCGAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGCCGCCGACAACACCCCTGAGaaaa < 2:2121749/137‑1 (MQ=255) gaAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGaaaa < 2:1603052/140‑1 (MQ=255) gaAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGaaaa < 2:1416897/140‑1 (MQ=255) aTACGATTTTATCAAACTGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATgg < 2:2322349/140‑1 (MQ=255) aTACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATgg < 2:1624595/140‑1 (MQ=255) aTACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATgg < 2:1124876/140‑1 (MQ=255) aTACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATgg < 1:1256500/140‑1 (MQ=255) aTACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATgg < 2:1851098/140‑1 (MQ=255) aTACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATgg < 2:1593949/140‑1 (MQ=255) aTACGATTTCATCAAAATGGTGATTACGAAGCCGCCAAATGCAGGAAAAGGAAAATCCTCTGCACTTAACTCGGGTTTTGCCGAATCGAACGGCGATGTGATCTGTGTGTATGACGCCGACAACACGCCTGAGAAAATgg < 2:682295/140‑1 (MQ=255) aagATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc < 1:1445471/138‑1 (MQ=255) aCGATTTTATCAAAATGGTGATCACAAAACCGCCTACCGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc < 2:1926079/140‑1 (MQ=255) aCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc < 1:1921552/140‑1 (MQ=255) aCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc < 1:1417038/140‑1 (MQ=255) aCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc < 1:177184/140‑1 (MQ=255) aCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc < 1:393471/140‑1 (MQ=255) aCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc < 2:648087/140‑1 (MQ=255) aCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc < 2:2075274/140‑1 (MQ=255) tttATCAAAATGGTGATCACAAACCCGCCTAACGCCGGACAAGGCAAATCCTCTGCACTGAACTCTGGACTTGCCTAATCGAACGCCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTa < 1:2075568/140‑1 (MQ=255) tttATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTa < 1:1831337/140‑1 (MQ=255) tttATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTa < 1:764578/140‑1 (MQ=255) ttATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTAt > 1:670236/1‑140 (MQ=255) ttATCAAAATGGTGATCAAAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTAt < 1:244588/140‑1 (MQ=255) tATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTAtt < 1:1016947/140‑1 (MQ=255) aaaaTGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCt < 1:149156/140‑1 (MQ=255) aaaaTGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCt < 1:905327/140‑1 (MQ=255) gTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCt < 1:301959/140‑1 (MQ=255) gTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCt < 1:508559/140‑1 (MQ=255) tGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTc > 1:1054972/1‑140 (MQ=255) aaaaCCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCtga > 2:1330303/1‑140 (MQ=255) ccGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGatgaa < 1:345962/140‑1 (MQ=255) ccGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGatgaa < 2:2165847/140‑1 (MQ=255) cGCCAAATGCAGGAAAAGGAAAATCCTCTGCACTTAACTCGGGTTTTGCCGAATCGAACGGCGATGTGATCTGTGTGTATGACGCCGACAACACGCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGatgaat < 1:2234693/140‑1 (MQ=255) ccTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGatgaatga > 2:1904856/1‑140 (MQ=255) cTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGATGAATGAc > 2:1567955/1‑140 (MQ=255) cGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGATGAATGACGaaa > 1:562386/1‑140 (MQ=255) | CCTTTATTATCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGATGAATGACGAAA > NZ_CP034943/480086‑480357 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |