Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NZ_CP034943 480,218 C→T 5.7% N117N (AAC→AAT EO946_RS02465 → glycosyltransferase family 2 protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP034943480,2180CT 5.7% 678.5 / 17.9 208N117N (AAC→AATEO946_RS02465glycosyltransferase family 2 protein
Reads supporting (aligned to +/- strand):  ref base C (54/141);  new base T (5/7);  total (60/148)
Fisher's exact test for biased strand distribution p-value = 3.29e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 209 total aligned reads displayed.

CCTTTATTATCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGATGAATGACGAAA  >  NZ_CP034943/480086‑480357
                                                                                                                                    |                                                                                                                                           
ccTTTATTATCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGaa                                                                                                                                      <  2:859919/140‑1 (MQ=255)
ccTTTATTATCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGaa                                                                                                                                      <  1:2285910/140‑1 (MQ=255)
   ttattaTCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGACAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAg                                                                                                                                   >  2:209832/1‑140 (MQ=255)
   ttattaTCCGAAGGACAGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAg                                                                                                                                   >  2:595029/1‑140 (MQ=255)
     attatCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGc                                                                                                                                 <  2:1533747/140‑1 (MQ=255)
     attatCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGc                                                                                                                                 <  2:578759/140‑1 (MQ=255)
       tatCCGCAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCaa                                                                                                                               <  2:844731/140‑1 (MQ=255)
       tatCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCaa                                                                                                                               <  1:359570/140‑1 (MQ=255)
       tatCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCaa                                                                                                                               <  2:1367622/140‑1 (MQ=255)
       tatCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCaa                                                                                                                               <  2:320526/140‑1 (MQ=255)
           cGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATcc                                                                                                                           >  2:2270102/1‑140 (MQ=255)
           cGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATAAAAATGGTGATCACAAAACCGCCTAAATCCGGAAAAGGCAAATcc                                                                                                                           >  2:357519/1‑140 (MQ=255)
              aGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCctct                                                                                                                        >  1:1333191/1‑140 (MQ=255)
                 aCCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCa                                                                                                                     <  1:385548/140‑1 (MQ=255)
                 aCCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCa                                                                                                                     <  2:404374/140‑1 (MQ=255)
                 aCCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCa                                                                                                                     <  2:2148109/140‑1 (MQ=255)
                   cggcTGGAGATTATCGTCGTTAATGATAATTCATCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTCATCAAAATGGTGATTACGAAGCCGCCAAATGCAGGAACAGGAAAATCCTCTGCACt                                                                                                                   >  1:565602/4‑140 (MQ=255)
                   cggcTGGAGATTATCGTCGTTAATGATAATTCATCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTCATCAAAATGGTGATTACGAAGCCGCCAAATGCAGGAAAAGGAAAATCCTCTGCACt                                                                                                                   >  1:568637/4‑140 (MQ=255)
                   cGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACt                                                                                                                   <  2:2210632/140‑1 (MQ=255)
                   cGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACt                                                                                                                   <  2:442038/140‑1 (MQ=255)
                   cGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACt                                                                                                                   <  1:485885/140‑1 (MQ=255)
                   cGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACt                                                                                                                   <  2:278392/140‑1 (MQ=255)
                   cGTCTGGAGATTATTGTGGTAAAAGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACt                                                                                                                   <  2:556692/140‑1 (MQ=255)
                               attGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGAtt                                                                                                       >  1:136661/1‑140 (MQ=255)
                                   tgGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGcc                                                                                                   >  1:69252/1‑140 (MQ=255)
                                      tAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGTGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGaa                                                                                                >  2:1060727/1‑140 (MQ=255)
                                          cGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGa                                                                                            >  2:1256500/1‑140 (MQ=255)
                                             tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGACAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg                                                                                         >  2:1697202/1‑140 (MQ=255)
                                             tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg                                                                                         >  2:605074/1‑140 (MQ=255)
                                             tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg                                                                                         <  2:782485/140‑1 (MQ=255)
                                             tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg                                                                                         >  2:485944/1‑140 (MQ=255)
                                             tAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGAAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg                                                                                         <  2:1227948/140‑1 (MQ=255)
                                             tAAGTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg                                                                                         <  2:1761932/140‑1 (MQ=255)
                                             tAAGTCGTCAGACCGGACGGCTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACg                                                                                         <  2:1337456/140‑1 (MQ=255)
                                               aTTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGc                                                                                       <  1:2023600/140‑1 (MQ=255)
                                                  cttcAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGAt                                                                                    <  2:1486599/140‑1 (MQ=255)
                                                  cttcAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGAt                                                                                    <  2:2038326/140‑1 (MQ=255)
                                                     cAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGAtgtg                                                                                 >  1:802206/1‑140 (MQ=255)
                                                       gACCGGACGTGTGATATAGTCAATGAATTGTCCGAGATATTCGTTTTTATCAAAATGGTGATCACAAAACCGCCTAACTCAGGAAATGGCAAATCCTCTGCACTGAACTTTGGATTTGCCGAATCGAACGGCGATGTGAt                                                                               <  1:209832/140‑1 (MQ=255)
                                                       gACCGGACGGGTGATATCGTCAATGAATTTTCCGATAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt                                                                               <  1:2223548/140‑1 (MQ=255)
                                                       gACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTCTCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt                                                                               <  2:263842/140‑1 (MQ=255)
                                                       gACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt                                                                               <  1:2270102/140‑1 (MQ=255)
                                                       gACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt                                                                               <  2:1893868/140‑1 (MQ=255)
                                                       gACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCGGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt                                                                               <  1:595029/140‑1 (MQ=255)
                                                         ccGGACGGGTGATATCGTCAATGACTGTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCt                                                                             <  2:307601/140‑1 (MQ=255)
                                                             aCGGGTGATATCGTCAATGAATTTTCCGAGAAATGCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACGGACCTCTGGATTTGCCGCATCGAACGGCGATGTGATCtgtgg                                                                         >  2:2396655/1‑139 (MQ=255)
                                                                  tGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATg                                                                    <  2:693315/140‑1 (MQ=255)
                                                                  tGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATg                                                                    <  2:515875/140‑1 (MQ=255)
                                                                  tGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATg                                                                    <  1:2046599/140‑1 (MQ=255)
                                                                  tGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATg                                                                    <  2:2433577/140‑1 (MQ=255)
                                                                  tGATATCGTCAATGAATTTTCCGAGAAATACGATTTCATCAAAATGGTGATTACGAAGCCGCCAAATGCAGGAAAAGGAAAATCCTCTGCACTTAACTCGGGTTTTGCCGAATCGAACGGCGATGTGATCTGTGTGTATg                                                                    >  2:774784/1‑140 (MQ=255)
                                                                     tatCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACg                                                                 <  2:2059340/140‑1 (MQ=255)
                                                                      atCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGc                                                                >  1:2088631/1‑140 (MQ=255)
                                                                      atCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGc                                                                >  1:1636737/1‑140 (MQ=255)
                                                                       tCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt                                                                               >  2:1143662/1‑124 (MQ=255)
                                                                       tCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt                                                                               <  1:1143662/124‑1 (MQ=255)
                                                                         gTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGa                                                             >  1:2013280/1‑140 (MQ=255)
                                                                           cAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGAtgt                                                                                  <  1:780111/117‑1 (MQ=255)
                                                                            aaTGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGacaa                                                          <  2:938315/140‑1 (MQ=255)
                                                                            aaTGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGacaa                                                          <  1:2409949/140‑1 (MQ=255)
                                                                            aaTGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGacaa                                                          <  2:1168520/140‑1 (MQ=255)
                                                                            aaTGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGacaa                                                          <  1:2212856/140‑1 (MQ=255)
                                                                                   tttCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGAt                                                                               <  1:956596/112‑1 (MQ=255)
                                                                                    ttCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACACCTg                                                  >  1:1401569/1‑140 (MQ=255)
                                                                                          gacaTACGATTTTATCAAAATGGTGATCACAAAACCGCCGAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGCCGCCGACAACACCCCTGAGaaaa                                            <  2:2121749/137‑1 (MQ=255)
                                                                                          gaAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGaaaa                                            <  2:1603052/140‑1 (MQ=255)
                                                                                          gaAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGaaaa                                            <  2:1416897/140‑1 (MQ=255)
                                                                                             aTACGATTTTATCAAACTGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATgg                                         <  2:2322349/140‑1 (MQ=255)
                                                                                             aTACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATgg                                         <  2:1624595/140‑1 (MQ=255)
                                                                                             aTACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATgg                                         <  2:1124876/140‑1 (MQ=255)
                                                                                             aTACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATgg                                         <  1:1256500/140‑1 (MQ=255)
                                                                                             aTACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATgg                                         <  2:1851098/140‑1 (MQ=255)
                                                                                             aTACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATgg                                         <  2:1593949/140‑1 (MQ=255)
                                                                                             aTACGATTTCATCAAAATGGTGATTACGAAGCCGCCAAATGCAGGAAAAGGAAAATCCTCTGCACTTAACTCGGGTTTTGCCGAATCGAACGGCGATGTGATCTGTGTGTATGACGCCGACAACACGCCTGAGAAAATgg                                         <  2:682295/140‑1 (MQ=255)
                                                                                               aagATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc                                       <  1:1445471/138‑1 (MQ=255)
                                                                                               aCGATTTTATCAAAATGGTGATCACAAAACCGCCTACCGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc                                       <  2:1926079/140‑1 (MQ=255)
                                                                                               aCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc                                       <  1:1921552/140‑1 (MQ=255)
                                                                                               aCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc                                       <  1:1417038/140‑1 (MQ=255)
                                                                                               aCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc                                       <  1:177184/140‑1 (MQ=255)
                                                                                               aCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc                                       <  1:393471/140‑1 (MQ=255)
                                                                                               aCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc                                       <  2:648087/140‑1 (MQ=255)
                                                                                               aCGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGcc                                       <  2:2075274/140‑1 (MQ=255)
                                                                                                    tttATCAAAATGGTGATCACAAACCCGCCTAACGCCGGACAAGGCAAATCCTCTGCACTGAACTCTGGACTTGCCTAATCGAACGCCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTa                                  <  1:2075568/140‑1 (MQ=255)
                                                                                                    tttATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTa                                  <  1:1831337/140‑1 (MQ=255)
                                                                                                    tttATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTa                                  <  1:764578/140‑1 (MQ=255)
                                                                                                     ttATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTAt                                 >  1:670236/1‑140 (MQ=255)
                                                                                                     ttATCAAAATGGTGATCAAAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTAt                                 <  1:244588/140‑1 (MQ=255)
                                                                                                      tATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTAtt                                <  1:1016947/140‑1 (MQ=255)
                                                                                                          aaaaTGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCt                            <  1:149156/140‑1 (MQ=255)
                                                                                                          aaaaTGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCt                            <  1:905327/140‑1 (MQ=255)
                                                                                                                gTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCt                      <  1:301959/140‑1 (MQ=255)
                                                                                                                gTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCt                      <  1:508559/140‑1 (MQ=255)
                                                                                                                 tGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTc                     >  1:1054972/1‑140 (MQ=255)
                                                                                                                        aaaaCCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCtga              >  2:1330303/1‑140 (MQ=255)
                                                                                                                            ccGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGatgaa          <  1:345962/140‑1 (MQ=255)
                                                                                                                            ccGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGatgaa          <  2:2165847/140‑1 (MQ=255)
                                                                                                                             cGCCAAATGCAGGAAAAGGAAAATCCTCTGCACTTAACTCGGGTTTTGCCGAATCGAACGGCGATGTGATCTGTGTGTATGACGCCGACAACACGCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGatgaat         <  1:2234693/140‑1 (MQ=255)
                                                                                                                               ccTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGatgaatga       >  2:1904856/1‑140 (MQ=255)
                                                                                                                                cTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGATGAATGAc      >  2:1567955/1‑140 (MQ=255)
                                                                                                                                    cGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGATGAATGACGaaa  >  1:562386/1‑140 (MQ=255)
                                                                                                                                    |                                                                                                                                           
CCTTTATTATCCGAAGGACCGTCTGGAGATTATTGTGGTAAACGATAATTCTTCAGACCGGACGGGTGATATCGTCAATGAATTTTCCGAGAAATACGATTTTATCAAAATGGTGATCACAAAACCGCCTAACGCCGGAAAAGGCAAATCCTCTGCACTGAACTCTGGATTTGCCGAATCGAACGGCGATGTGATCTGTGTATATGACGCCGACAACACCCCTGAGAAAATGGCCGTGTATTACCTCGTGCTCGGCCTGATGAATGACGAAA  >  NZ_CP034943/480086‑480357

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: