| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,308,465 | G→T | 5.8% | Q180K (CAA→AAA) | EO946_RS17110 ← | glycosyl hydrolase family 18 protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,308,465 | 0 | G | T | 5.8% | 430.6 / 11.8 | 138 | Q180K (CAA→AAA) | EO946_RS17110 | glycosyl hydrolase family 18 protein |
| Reads supporting (aligned to +/- strand): ref base G (78/52); new base T (4/4); total (82/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.98e-01 | |||||||||||
Only 100 of 144 total aligned reads displayed.
AGCTTTTGATCCAGCTTGTGCTCGCCACTGATCCCGGATCGCCCCAAATGCCGTGTTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGATATTGATACCG > NZ_CP034943/3308327‑3308604 | agCTTTTGATCCAGCTTGTGCTCGCCACTGATCCCGGATCGCCCCAAATGCCGTGTTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGa > 2:1260386/1‑140 (MQ=255) ttttGATCCAGTTTGTGCTTGCCACTGACCCCGGCTCACCCCAAATGCCGTGTTCATCGTAGGTCATGACTTGTACGAAGTCGGCATATTTGCCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTTatca > 1:1231434/1‑140 (MQ=255) ttttGATCCAGTTTGTGCTTGCCACTGACCCCGGCTCACCCCAAATGCCGTGTTCATCGTAGGTCATGACTTGTACGAAGTCGGCATATTTGCCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTTatca > 1:595367/1‑140 (MQ=255) ttttGATCCAGTTTGTGCTTGCCACTGACCCCGGCTCACCCCAAATGCCGTGTTCATCGTAGGTCATGACTTGTACGAAGTCGGCATATTTGCCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTTatca > 1:2172943/1‑140 (MQ=255) ttGATCCAGCTTGTGCTCGCCACTGATCCCGGATCGCCCCAAATGCCGTGTTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGatcatc > 2:1190624/1‑140 (MQ=255) ttGATCCAGCTTGTGCTCGCCACTGATCCCGGATCGCCCCAAATGCCGTGTTCAGCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGatcatc > 2:2029964/1‑140 (MQ=255) aGCTTGTGCTCGCCACTGATCCCGGATCGCCCCAAATGCCGTGTTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCtt > 2:1511284/1‑140 (MQ=255) aGCTTGTGCTCGCCACTGATCCCGGATCGCCCCAAATGCCGTGTTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCtt > 2:1353881/1‑140 (MQ=255) gCCACTGATCCCGGATCGCCCCAAATGCCGTGTTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCCGCTCCCGTCATCATTTTGATCATCGGCGCTTTTGGCAGGTAc > 1:122269/1‑140 (MQ=255) gCCACTGATCCCGGATCGCCCCAAATGCCGTGTTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAAc < 1:464008/140‑1 (MQ=255) gCCACTGATCCCGGATCGCCCCAAATGCCGTGTTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAAc < 1:2250483/140‑1 (MQ=255) aCTGATCCCGGATCGCCCCAAATGCCGTGTTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGa < 2:1816240/140‑1 (MQ=255) tCCCGGATCGCCCCAAATGCCGTGTTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCa < 1:757665/140‑1 (MQ=255) tCCCGGATCGCCCCAAATGCCGTGTTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCa < 1:1604087/140‑1 (MQ=255) tCCCGGATCGCCCCAAATGCCGTGTTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCa < 1:934350/140‑1 (MQ=255) tCCCGGATCGCCCCAAATGCCGTGTTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCa < 2:566421/140‑1 (MQ=255) tCCCGGATCGCCCCAAATGCCGTGTTCATCGAAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCa < 2:609147/140‑1 (MQ=255) gCCGTGTTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCt < 1:1406341/140‑1 (MQ=255) ttgtTCATCGTAAGTAATCACCAGCACATAATCCGCAAATTTAACGATTTAAGCATAATCATACCGCCAGCTCCAGTCATCATATTGATCATCGGCGATTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCtttt > 1:440551/2‑140 (MQ=255) gtgtTCATCTTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCtttt > 2:1223968/1‑140 (MQ=255) gtgtTCATCGTAAGTCATCACCTGCACGTCATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCCTCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCtttt > 2:795675/1‑140 (MQ=255) gtgtTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCCTTGTTTTAATATGTTTCtttt > 1:2376764/1‑140 (MQ=255) gtgtTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCtttt > 1:1017286/1‑140 (MQ=255) gtgtTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCtttt > 1:1078750/1‑140 (MQ=255) gtgtTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCtttt > 2:2288749/1‑140 (MQ=255) gtgtTCATCGTAAGTCATCACCTGCACGTAAGCCGCATATTTACCGATTTTCGCAGAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAAGCAGTGTGTTAATATGTTTGtttt > 1:1267186/1‑140 (MQ=255) ttCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCa < 2:19574/140‑1 (MQ=255) aTCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCaga > 2:1510997/1‑139 (MQ=255) cGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCAGTGTTTTAATATGTTTCTTTTTCAGAGcc > 1:1869057/1‑140 (MQ=255) gTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTga > 2:1072349/1‑140 (MQ=255) atcaCCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGAc > 2:1386243/1‑140 (MQ=255) atcaCCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGAc > 2:1016897/1‑140 (MQ=255) atcaCCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGAc > 2:289955/1‑140 (MQ=255) atcaCCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGAc > 2:962546/1‑140 (MQ=255) atcaCCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTAATAGCCTGTGAGAc > 2:1523583/1‑140 (MQ=255) atcaCCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATAAGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGACTGTGAGAc > 2:2329472/1‑140 (MQ=255) caCCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACAt > 2:54011/1‑140 (MQ=255) cACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGTACCCATTGTTTTAATATGTTTCTTTTTCAGGGCCTGTGAGACATCTtgaa > 1:779278/1‑140 (MQ=255) cACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGATCCTGTGAGACATCtttat > 1:2255066/1‑137 (MQ=255) cACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTtgaa > 2:1137497/1‑140 (MQ=255) agtcggCATATTTGCCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTTATCATCGGCGCTTTTGGCCGGAACGGATACCATTGTTTTAATATGTTTCTTATTCAAAGCCTGTGAGACATATTGAATGAAg < 2:1231434/135‑1 (MQ=255) aaTCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAg < 2:2393227/140‑1 (MQ=255) cGCCTATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGcgcg < 1:1087823/140‑1 (MQ=255) cGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGcgcg < 1:1497919/140‑1 (MQ=255) cGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGcgcg < 1:1511284/140‑1 (MQ=255) cGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGcgcg < 1:1403754/140‑1 (MQ=255) cGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGcgcg < 1:275271/140‑1 (MQ=255) cGCATATTTACCGATGTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGcgcg < 1:1352489/140‑1 (MQ=255) cGCATATTTACCGAGTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGcgcg < 2:300278/140‑1 (MQ=255) gCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCAt < 2:982328/86‑1 (MQ=255) gCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCAt > 1:982328/1‑86 (MQ=255) cATATTTACCGATTTTCGCCTAATCATACGGCCAGCTCCCGTCATCATGTTGATCATCGGCGCTTTTGGCAGGAACAGAACCCAGGGGGGTCATCTGTGGCGGTTTCCGAGCCTGGGAGACCTCTTGTATGAAGCGCGAg > 2:2240817/1‑140 (MQ=255) cATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCCTTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAg > 2:1266748/1‑140 (MQ=255) cATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATGTTGAATGAAGCGCGAg > 1:150139/1‑140 (MQ=255) cATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAg > 2:900755/1‑140 (MQ=255) cgatagtCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAAGATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGAt < 2:1842732/134‑1 (MQ=255) cGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGAACATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGAt < 1:2065449/140‑1 (MQ=255) aTTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCg < 2:574398/140‑1 (MQ=255) aTTTTCGCATAATCATACGGCCAGCTCCAGTAATCATTTTGATCATCGGCGCTTTTGTCAGGAACAGAAACAATTTTTTTAATATGTTTCTTTTTCAGAGAATGTGATACATCTTTAATGAAGCGCGAGGATTTGTATCg > 2:1525515/1‑140 (MQ=255) aTTTTCGCATAATCATACGGCCAGCTCCAGGCATCATTTTGATCATCGCCGCTTTTGGCCTGAACAGTAACCATTGTTTTAATCTGTTACTTTTTCAGAGCCAGTCAGACATCTTCAATGAAGCGCCAGTATTTGGAACg > 2:469582/1‑140 (MQ=255) tttCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGGTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGACGCGCGAGGAGTTGGATCGGt > 1:1606400/1‑140 (MQ=255) gttCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGACACCGTTGGTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTCTTTGGATCGGt > 2:1608200/2‑140 (MQ=255) tCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGtct > 2:779506/1‑140 (MQ=255) tCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGtct > 2:1852726/1‑140 (MQ=255) ataacgCCAGCTCCATTCATCATTTTGATCATCGTCGCTTTGTGCAGTAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATATTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCa < 2:485834/135‑1 (MQ=255) aTACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCa < 2:353312/140‑1 (MQ=255) tACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGAt > 1:1512781/1‑123 (MQ=255) aGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCCTGGGTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGTATGAAGCGCGAGTAGTTGGATCGGTCTTCTGGAGTCACTGCTTCa > 2:1364286/1‑140 (MQ=255) aGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTCATAAGTTTCTTTTTCAGAGCCTGTGAGACATAGTGAATGAATCGCGAGTATTTGGATCGGTCTTCTGGATTAACTTCTTCa > 1:839782/1‑140 (MQ=255) aGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGa < 2:2389971/106‑1 (MQ=255) aGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCg > 1:2171415/1‑118 (MQ=255) aGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCg < 2:2171415/118‑1 (MQ=255) aGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCa > 1:1036763/1‑140 (MQ=255) aGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAAGATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCa > 1:2133325/1‑140 (MQ=255) aGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCACGAACAGAAACCATGGTTTTAATATGTTTCTTTTTCAGAGCCGGTGATACCTCTTGAATGAAGCGCGAGTATTTGGATAGGTCTTCTGGATTCACTGCTTcc > 1:2276327/1‑139 (MQ=255) cTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCaaa > 1:326706/1‑140 (MQ=255) cTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCGTCaaa > 1:1298020/1‑140 (MQ=255) cTCCAGTCATCATGTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCAGTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGGTCGGTGTTCTGGATTCACTGATTCaaa > 1:1624940/1‑140 (MQ=255) gTCATCATTTTGATCATCGGCGCTTTTGGCAGTAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTTAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAACTCGa > 1:2071336/1‑140 (MQ=255) gTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACCTCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAACTCGa > 2:1951892/1‑140 (MQ=255) gTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGa > 2:2027979/1‑140 (MQ=255) gTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGa > 2:885128/1‑140 (MQ=255) gTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGa > 1:1977477/1‑140 (MQ=255) gTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGa > 2:454719/1‑140 (MQ=255) gTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGa > 2:1037980/1‑140 (MQ=255) tcatcaTTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTGTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGat < 1:710372/140‑1 (MQ=255) tcatcaTTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTtgaa < 2:1890855/88‑1 (MQ=255) tcatcaTTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTtgaa > 1:1890855/1‑88 (MQ=255) catTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGATATTg > 1:36517/1‑140 (MQ=255) catTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGATATTg > 2:950561/1‑140 (MQ=255) catTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGATATTg > 2:796023/1‑140 (MQ=255) atTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGATATTGa < 2:2059866/140‑1 (MQ=255) ttGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCCCTGCTTCAAAATCGATATTGATAc < 1:546684/140‑1 (MQ=255) ttGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGATATTGATAc < 1:2027979/140‑1 (MQ=255) ttGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGATATTGATAc < 1:1037980/140‑1 (MQ=255) ttGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGATATTGATAc < 2:985966/140‑1 (MQ=255) gATCATCGGCGTTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGATATTGATACCg < 1:974581/140‑1 (MQ=255) gATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGATATTGATACCg < 2:719249/140‑1 (MQ=255) gATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGATATTGATACCg > 2:1155997/1‑140 (MQ=255) gATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGATATTGATACCg < 1:707351/140‑1 (MQ=255) | AGCTTTTGATCCAGCTTGTGCTCGCCACTGATCCCGGATCGCCCCAAATGCCGTGTTCATCGTAAGTCATCACCTGCACGTAATCCGCATATTTACCGATTTTCGCATAATCATACGGCCAGCTCCAGTCATCATTTTGATCATCGGCGCTTTTGGCAGGAACAGAAACCATTGTTTTAATATGTTTCTTTTTCAGAGCCTGTGAGACATCTTGAATGAAGCGCGAGTATTTGGATCGGTCTTCTGGATTCACTGCTTCAAAATCGATATTGATACCG > NZ_CP034943/3308327‑3308604 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |