| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,991,699 | T→C | 29.0% | K46E (AAA→GAA) | walH ← | WalRK two‑component regulatory system regulator WalH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,991,699 | 0 | T | C | 29.0% | 327.8 / 168.4 | 216 | K46E (AAA→GAA) | walH | WalRK two‑component regulatory system regulator WalH |
| Reads supporting (aligned to +/- strand): ref base T (71/81); new base C (29/32); total (102/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 234 total aligned reads displayed.
TGAGGCAAGTCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGAGTACCGTAAGTAATATCGTTTTTATATTTTCACGCTTCATCC > NZ_CP034943/3991563‑3991836 | tGAGGCAAGTCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCCGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTtctc < 1:625726/140‑1 (MQ=255)tGAGGCAAGTCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTtctc < 2:690371/140‑1 (MQ=255)tGAGGCAAGTCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTtctc < 2:1770236/140‑1 (MQ=255)tGAGGCAAGTCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTcctc < 2:2402990/140‑1 (MQ=255) ggCAAGTCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACg < 1:728388/140‑1 (MQ=255) ggCAAGTCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACg < 1:1903037/140‑1 (MQ=255) ggCAAGTCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTATTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACg < 1:1636649/140‑1 (MQ=255) ggCAACTCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACg < 2:1292821/140‑1 (MQ=255) gCAAGTCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGc < 2:422858/140‑1 (MQ=255) gCAAGTCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGc < 2:1725073/140‑1 (MQ=255) gCAAGTCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGc < 1:492173/140‑1 (MQ=255) gCAAGTCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGc < 2:67803/140‑1 (MQ=255) gCAAGTCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGc < 1:1693733/140‑1 (MQ=255) cAAGTCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGca > 1:163275/1‑140 (MQ=255) aGTCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGcaca > 1:1962836/1‑140 (MQ=255) tCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGt < 1:638939/140‑1 (MQ=255) cagaccagacTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTa < 1:1171908/140‑1 (MQ=255) cagaccagacTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTa < 2:1264076/140‑1 (MQ=255) cagaccagacTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTa < 2:163275/140‑1 (MQ=255) cagaccagacTACTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTa < 2:593707/140‑1 (MQ=255) accagacTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGAc > 1:67377/1‑140 (MQ=255) accacacTTCTTAATAGAGGGATTCATCAACCACTTTGTAATGAGCGCAGTCATCATGGATAAACATGTCCATCGGTCTTACCGTTTCAGACAACTTATCTGTGTTTTTTTCTATTTTATGTTTCTCACGCACAGAAGAc > 2:1678032/1‑140 (MQ=255) ccagacTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGAct < 2:2282537/140‑1 (MQ=255) cagacTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGActc < 2:2414957/140‑1 (MQ=255) cagacTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGActc < 2:76644/140‑1 (MQ=255) gacTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTg < 2:400007/140‑1 (MQ=255) acTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGACTCTGt > 1:1944621/1‑140 (MQ=255) cttcttCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGtt > 1:1928658/1‑140 (MQ=255) cttcttCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGtt < 2:61825/140‑1 (MQ=255) cttcATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACCTGTCCCTCGGTCTTACCGTTTCAGACAAGTTGGGGGTGTTTTGTTCGCTTTTATGTTCCTCAGGCCCCGTAGCCTCTGtgggt > 2:1885386/1‑136 (MQ=255) ttcATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTtgatg > 1:1754794/1‑140 (MQ=255) atagGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCACTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATTTTTCTCACGCACAGTAGACTCTGTTGATGATGAg > 2:1139916/3‑140 (MQ=255) agagGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAg > 2:5670/1‑140 (MQ=255) agagGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTGTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAg > 2:336243/1‑140 (MQ=255) agGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGa < 1:1522978/122‑1 (MQ=255) agGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGACTCTGTTGATGATGAGcc > 1:1049849/1‑140 (MQ=255) agGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGACTCTGTTGATGATGAGcc > 1:356461/1‑140 (MQ=255) tgCTTAATCATCCACTTTGTAAAGAGCGCCGTCATCATTGATTAACATGTCCCTCCGTCTTACCGGTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGGTCATGATTAGCCtt > 2:1215552/2‑140 (MQ=255) ggCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTg < 2:1504017/125‑1 (MQ=255) ggCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCtt > 1:552316/1‑140 (MQ=255) ggCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCtt > 1:290460/1‑140 (MQ=255) ggCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGACTCTGTTGATGATGAGCCtt > 2:2070035/1‑140 (MQ=255) ggCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTACTCACGCACAGTAGACTCTGTTGATGATGAGCCtt > 2:362185/1‑140 (MQ=255) ggCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTATTGGGTGTTTTTTTCGATTTTATGTTCCTCAAGCACAGTAGAATCTGTTGATGATGAGCCtt > 2:2298564/1‑140 (MQ=255) gCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTc > 2:826321/1‑140 (MQ=255) tcCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGtt > 1:1084976/1‑140 (MQ=255) tcCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGtt > 1:2265518/1‑140 (MQ=255) cACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAATTTTg > 2:1388770/1‑140 (MQ=255) cACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTg > 2:48338/1‑140 (MQ=255) tttGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGActc > 1:1796217/1‑108 (MQ=255) tGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTgg > 2:1101880/1‑140 (MQ=255) tGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTgg > 2:1867314/1‑140 (MQ=255) gTAATGAGCGCCGTCATCAGGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTGGATTTTATGTTCCTCACGCACAGTAGACTCTTTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGa < 2:713965/140‑1 (MQ=255) tactGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTTTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGaa < 2:2183176/137‑1 (MQ=255) tAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGaa < 1:1014895/140‑1 (MQ=255) tAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGaa < 2:905772/140‑1 (MQ=255) tAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGaa < 1:557908/140‑1 (MQ=255) tAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGGTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGaa < 2:2420999/140‑1 (MQ=255) aGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTcc > 2:648606/1‑140 (MQ=255) aGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTcc > 1:808552/1‑140 (MQ=255) aGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTcc > 1:2414995/1‑140 (MQ=255) ccGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCatat < 2:776681/140‑1 (MQ=255) catcatGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATcccc < 1:1413055/140‑1 (MQ=255) tGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGt < 1:1316698/140‑1 (MQ=255) gATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGaa < 1:1972188/120‑1 (MQ=255) gATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGaa > 2:1972188/1‑120 (MQ=255) tAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAac > 2:2278462/1‑140 (MQ=255) aaCATGTCCCTCGGTCTTACCGTTTCAGACACCTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAacac > 2:1818375/1‑140 (MQ=255) aaCATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAacac > 1:1460493/1‑140 (MQ=255) gacTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTTGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACATGACtg < 2:1610722/138‑1 (MQ=255) tCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACtgatg < 1:136621/140‑1 (MQ=255) tCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACtgatg < 2:1003606/140‑1 (MQ=255) tCGGTCTTACAGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACtgatg < 2:1407300/140‑1 (MQ=255) cGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGGTGAGCCTTCAGAAAAGTTTGGCTGGTACGTCCATATCCCCCACGTAAACACAAGACtgatga > 1:2308452/1‑140 (MQ=255) cGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACtgatga > 1:1736342/1‑140 (MQ=255) cGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACtgatga > 1:1109782/1‑140 (MQ=255) cGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACtgatga > 1:844017/1‑140 (MQ=255) ggTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACtgatgat > 1:1211038/1‑140 (MQ=255) gTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACtgatgatg > 1:327535/1‑140 (MQ=255) tACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATCTCCCCCCCGTAAACACAAGACTGATGATGACGa < 1:1132545/140‑1 (MQ=255) tACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGa < 1:2162250/140‑1 (MQ=255) tACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGa < 1:2065368/140‑1 (MQ=255) ccGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGAGt < 1:113014/140‑1 (MQ=255) tttCAGACATCTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGAGTAcc < 1:2023049/140‑1 (MQ=255) tttAAGACAACTTTTGGGTGTTTTTTTCTATTTTATGTTTCTCACGCACAGTAGACTCTGTTTATGATGAGCCTTCAGAAAAGTTTGGCTGGAAAGTCCATATCCCCCAAGTAAACACAAGACTGATGATGACGAGTAcc < 2:455866/140‑1 (MQ=255) tCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGAGTACCgt < 1:536081/140‑1 (MQ=255) tCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTCCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGAGTACCgt < 1:1818445/140‑1 (MQ=255) cTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGAGTACCGTAAGTAata > 1:20830/1‑140 (MQ=255) gtTTTTTTCGATTGTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGAGTACCGTAAGTAATATCGTTTTta < 2:2383818/140‑1 (MQ=255) ttttATGTTCCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGAGTACCGTAAGTAATATCGTTTTTATATTTTCACGc < 2:1441144/140‑1 (MQ=255) ttttATGTTACTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGAGTACCGTAAGTAATATCGTTTTTATATTTTCACGc < 2:514965/140‑1 (MQ=255) tttATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGAGTACCGTAAGTAATATCGTTTTTATATTTTCACGCt < 1:926661/140‑1 (MQ=255) ttATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCCCGTAAACACAAGACTGATGATGACGAGTACCGTAAGTAATATCGTTTTTATATTTTCACGCtt < 2:137872/140‑1 (MQ=255) ttATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGAGTACCGTAAGTAATATCGTTTTTATATTTTCACGCtt < 2:1928658/140‑1 (MQ=255) ttATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGAGTACCGTAAGTAAGATCGTTTTTATATTTTCACGCtt < 1:438327/140‑1 (MQ=255) ttATGTTCCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAATGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGAGTACCGTAAGTAATATCGTTTTTATATTTTCACGCtt < 1:313068/140‑1 (MQ=255) tttCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTCAACACAAGACTGATGATGACGAGTACCGTAAGTAATATCGTTTTTATATTTTCACGCTTCATcc < 2:259459/140‑1 (MQ=255) tttCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGAGTACCGTAAGTAATATCGTTTTTATATTTTCACGCTTCATcc < 2:1538833/140‑1 (MQ=255) tttCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGAGTACCGTAAGTAATATCGTTTTTATATTTTCACGCTTCATcc < 1:200357/140‑1 (MQ=255) tttCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGAGTACCGTAAGTAATATCGTTTTTATATTTTCACGCTTCATcc < 2:1084976/140‑1 (MQ=255) | TGAGGCAAGTCAGACCAGACTTCTTCATAGAGGGCTTCATCATCCACTTTGTAATGAGCGCCGTCATCATGGATAAACATGTCCCTCGGTCTTACCGTTTCAGACAACTTTTGGGTGTTTTTTTCGATTTTATGTTTCTCACGCACAGTAGACTCTGTTGATGATGAGCCTTCAGAAAAGTTTGGCTGGAACGTCCATATCCCCCACGTAAACACAAGACTGATGATGACGAGTACCGTAAGTAATATCGTTTTTATATTTTCACGCTTCATCC > NZ_CP034943/3991563‑3991836 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |