| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 4,022,624 | G→C | 10.3% | A616P (GCC→CCC) | EO946_RS20675 → | thioredoxin domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 4,022,624 | 0 | G | C | 10.3% | 398.1 / 2.4 | 157 | A616P (GCC→CCC) | EO946_RS20675 | thioredoxin domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (64/73); new base C (2/18); total (66/91) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.46e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 167 total aligned reads displayed.
AAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTGCAGCAGACTACCGCATCATAGACGGCAAAACAAC > NZ_CP034943/4022486‑4022760 | aaaGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATccagc < 2:1106742/140‑1 (MQ=255)aaaGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATccagc < 2:1709682/140‑1 (MQ=255) aGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATccagcca > 1:876491/1‑140 (MQ=255) aGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATccagcca > 1:1802977/1‑140 (MQ=255) cAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGa > 2:894398/1‑140 (MQ=255) cAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGa > 2:14143/1‑140 (MQ=255) cAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGa > 2:1575498/1‑140 (MQ=255) aaaCGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGaaaa < 2:1050465/140‑1 (MQ=255) aaaCGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGaaaa < 1:2068652/140‑1 (MQ=255) aaaCGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGaaaa < 2:2273172/140‑1 (MQ=255) aTGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATTCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGACATGGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAAt < 2:2217071/140‑1 (MQ=255) aTGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAAt < 2:1686109/140‑1 (MQ=255) ttttCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAACAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATcac < 1:349544/140‑1 (MQ=255) ttCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATcacca > 2:969309/1‑140 (MQ=255) ttCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATcacca > 2:856621/1‑140 (MQ=255) gtgtTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGc > 2:976200/1‑140 (MQ=255) gtTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCAc < 2:474656/140‑1 (MQ=255) gtTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCAc > 1:58798/1‑140 (MQ=255) aaGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCa > 2:823964/1‑140 (MQ=255) aGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTA‑TTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCaaa < 2:247892/140‑1 (MQ=255) gCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAACGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCaaa < 2:1420713/140‑1 (MQ=255) ctgATATCGAAGCGTATACGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCaaaaa < 2:1881524/138‑1 (MQ=255) cGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCaaaaa < 2:860236/140‑1 (MQ=255) ggATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAg > 2:236368/1‑140 (MQ=255) atatCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGcc > 2:2342618/1‑140 (MQ=255) cGAAGGGTATCCGAGCGTCCATGCTTTCTTTTTGCAAAGCGTGTTATAGCATTTGATGACTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACGACTGCACTTCAAAAAGCCtttt < 2:1221297/140‑2 (MQ=255) cGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTa > 2:1900130/1‑140 (MQ=255) aaGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAg > 2:2229224/1‑140 (MQ=255) tATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCaa > 2:1148703/1‑140 (MQ=255) tCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACg > 2:621065/1‑140 (MQ=255) cGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAACGCATGTGATGCCTAACAAGCAAAGCGTTATTTTGGGCAGCGCAGACGATCCAGCCATAAAACAAATCACCACGGCACTTCAAAAAGCCTTTAAGCCCAACGAc < 2:419295/140‑1 (MQ=255) cGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCa > 1:1662455/1‑140 (MQ=255) gCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCAtt > 1:931396/1‑140 (MQ=255) gCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCAtt > 1:265443/1‑140 (MQ=255) ccATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCAttt > 2:1735269/1‑140 (MQ=255) aTGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTtg > 1:1772822/1‑140 (MQ=255) ctttctttATGCAAAGCGTGTAAAAGCATGTGATGCCTAAAAAGTAAATCGTTATTTTTGGCAGCGCAGACGATCCACCCAGAAAAAAAATCACCACTGCACTACAAAACGCCTTAAAGCCCAACGACTCCATTTtggtg < 1:2243792/140‑1 (MQ=255) tctttATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCa > 2:199279/1‑140 (MQ=255) tttCTGCAACGCGTGTAAACGCCTGTGATGCCAAAACACGAAATCGTAATTTTTGCCAGCGCCGACGATCCACCCACAAAACAAATCACCACTGCACTACAAAAAGCCTTTACGCCCAACGACTCCATTTTGGTGGCaga < 1:1340379/140‑1 (MQ=255) tttATTCAACGCTCGTTAAAGGCTGTGCTGCCCAAAAACGAAATCGTTATTTTTGGGAGGGCCGACCTCCCCGCCACAAAAAAAATAACAACTCCACTTCAACAACCCATTAAGCCCAACGACTCCATTTTGGTGGCaga < 1:1003317/140‑1 (MQ=255) tttATGCAAAGCGTGTTAAAGCCTGTGTTGCATAAACAGGAAATCGTTATTTTTGGGAGCGCACACGACCCCGCCAGAAAAAAAATCACCACTGCAATTCAAAACCCGTTTAACCCCAACGACTCCATTTTGGTGGCaga < 1:115477/140‑1 (MQ=255) tttATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCATACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga > 2:2008768/1‑140 (MQ=255) tttATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCCGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga > 2:19376/1‑140 (MQ=255) tttATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga > 2:2062406/1‑140 (MQ=255) tttATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga > 2:538447/1‑140 (MQ=255) tttATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTAATTGTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAATAAGCCTTTAATCCCAACGACTCCATGTTGGTGGCaga > 2:1505434/1‑140 (MQ=255) tttATGAAACGCGTGTTAAAGAATGTGAGGCCTAAAAAGCAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCACAAAAAAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga < 2:939875/140‑1 (MQ=255) tttATCCAAAGCGTTTTAAAGCATTTTATGCAAAAACAGCAAAGCGTTATTTTTGCCAGCGCAGACGACCCAGCAACAAAAAAAATCACCACTGCACTAAAAAAAGCCTTTAACCCCAACGACTCCATTTTGGTGGCaga < 1:171484/140‑1 (MQ=255) tttATCCAAAGCGTTTTAAAGATTGTGAGGCCTAAAAAGAAAATCTTTATTTTTGGCAGCGCAGACGAGCCAGCCAGAAAACAAATCACCACGGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga < 1:1724158/140‑1 (MQ=255) cttATGCACTGCGTTTTCAACCATGTGATGCCTAACAAGCAAAACGTTATTTTGGCCAGCCCAGACGATCCAGCCAGAAAACAAATCACAACTGCACTCCAAAACCCCTTTACGCCCAACGCCTCCATTTTGGTGGCaga < 1:1654684/139‑1 (MQ=255) attATGCAAAGCGTGTTAAAGCATGTTATGCAAAAAAAGTAAATCGTTATTTTTGGCAGCGCAGACGATCAAGCCACAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga < 2:759064/139‑1 (MQ=255) aTGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCACAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCa > 2:1683539/1‑140 (MQ=255) gCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATc > 1:421211/1‑140 (MQ=255) aaGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTg > 1:1425192/1‑140 (MQ=255) aaGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTg > 1:1061151/1‑140 (MQ=255) cGTTTTAACGCATGTGATGCCTAAAACGGAAATCGTTTTTTTGGGCAGCGCAGACGATCCAGCCAGAAAACAAAACACCACTGAACTTCAAAAACCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATc < 2:801315/140‑1 (MQ=255) cGTGTTAAATCATGTGATGCCTAAAAAGTAAATCGTTATTTTTGGAAGCGCAGACGATCCAGCCATAAAAAAAATAACCACTGAACTTCAAAAAGCCTTTAAGCCCCACGACTCCATTTTGGTGGCAGAGCATCCTGATc < 2:1224843/140‑1 (MQ=255) cGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAAAAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATc < 2:2391233/140‑1 (MQ=255) caccATGCGATGCCTAACACGCAAACCTTTATTTTGGGGCGCGCAGACGATCCACCCACAAAAAAAATCACCACTGCACTTAAAAAAGCATTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCaa < 1:1832030/137‑1 (MQ=255) acccATGTGATGCATAAAACGGAAATCGTTATTTTTGGCAGCGCAGACGATCCCGCCATAAAAAAAATCACCACTGCACTTAAAAAAGCCTTTAACCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCaa < 1:1951535/137‑1 (MQ=255) aaccATGTTTTGCCAAAAAAGGAAATCTTTATTTTTGGCAGCGCATACGACCCCCCCACAAACCAAATCACCACTGCACTTAAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCaa < 1:856621/137‑1 (MQ=255) aaGCTTGTGATGCATAAAAAGCAAATCTTTATTTTTGGCAGCGCAGACGAGCCCCCCAGAAAAAAAATCACCACGCCACTTCAAAACGCATTAAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCaa < 1:2140196/140‑1 (MQ=255) aaGCATTTTATGCATAAAAAGTAAATCTTTTTTTTTGGCAGCCCAGACCATCCAGCCAGAAAACAAAACACCACTGCACTTCAAAAAGCCTTTACGCCCCACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCaa < 1:120090/140‑1 (MQ=255) aaGCATGTGATGCCTAAAAAGTAAATCGTTATTTTTGGCAGCGCAGACGATCCACCCATAAAAAAAATAACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCaa < 2:1220766/140‑1 (MQ=255) aaGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAACGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCaa < 1:2335519/140‑1 (MQ=255) aaGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCaa < 2:1772822/140‑1 (MQ=255) aaGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCaa < 1:1735269/140‑1 (MQ=255) aaGCATGTGATGCATAAAAAGGAAATGTTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAAAAAATCACCACTGCACTTAAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCaa < 1:1316532/140‑1 (MQ=255) gctttttaTGCCTAAAAAGTAAAGCTTTATTTTGGGCAGCGCAGACTATCCAGCCATAAAAAAAATCACCACTGAACTTCAAAAAGCCTTTAACCCCCACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAg < 1:2190182/133‑1 (MQ=255) gCATTTGATGCCTAAAAATGAAATCGTTATTTTTGGCAGCGCAGACTATCCAGCCAGAAAAAAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAg < 2:2301637/140‑1 (MQ=255) gCATGTGATGCATAAAAAGCAAATTTTTTTTTTTGGCAGCGCAGACTATCCAGCCAGAAAAAAAATAACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAg < 1:887734/140‑1 (MQ=255) cATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGa > 1:805176/1‑140 (MQ=255) tgtgATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGAt < 1:2117900/127‑1 (MQ=255) tgtgATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGAt > 2:2117900/1‑127 (MQ=255) tgtgATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCCAAGACa > 2:1593440/1‑140 (MQ=255) tctgATGCCTAAAAACGAAATCGTAATTATTGGCAGCTCAGACGATCCACCCAGCCAACAAATCAACACTGAACTTCAAAAAGCCTTAAAGCCCAACGACTCCAGTTTGGTGGCAGAGCATCCTGATCAATGCTAAGACa > 2:393157/3‑140 (MQ=255) gtgATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCaga > 1:679332/1‑116 (MQ=255) aTGCCTAAAAAGTACATCTTTTTTTTTGGCAGCGCATTCTATCCAGCAAGAAAAAAAAAAACCACTGCACTTCAAAAAGCCTTTACGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGc < 1:1411739/140‑1 (MQ=255) tGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCa > 1:462812/1‑140 (MQ=255) tGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCAAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCa < 1:2072406/140‑1 (MQ=255) gcatAAAAAGTAAATCTTTATTTTTGGCAGCGAAGACGATCCACCCAGAAAAAAAATCACCACTGAAATTAAAAAAGCATTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCAc < 1:796831/137‑1 (MQ=255) tAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCt > 1:123284/1‑140 (MQ=255) aacggAAATCTTTATTTTTGGCAGCGCAGACTATCCAGCAATAAAAAAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTg < 1:2002606/137‑1 (MQ=255) gtaaaTCTTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAAAAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTgcag < 2:931396/138‑1 (MQ=255) ggAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTgcag < 2:265443/140‑1 (MQ=255) ggAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTgcag < 2:1630885/140‑1 (MQ=255) aaaTCGTTATTTTTGGCAGCGCAGACGATCCCGAAATAAAACAAATAACCACTGCACTTAAAAACGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTgcagca < 1:612826/140‑1 (MQ=255) aaaTCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCCCTCCACTTCAAAAACCCGTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTgcagca < 1:1816593/140‑1 (MQ=255) tctttATTTTGGGCAGCGCATACGACCCACCCATAAAACAAATCACCACTCCACTTAAAAACGCCTTTAAGCCAAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTGCAGCAGAc < 1:25724/137‑1 (MQ=255) gTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTGCAGCAGACTa < 2:349776/140‑1 (MQ=255) gATCCAGCAAGAAAACAAATCACCACGGCACTTAAAAAAGCCTTTAACCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACACTTTGCAGCAGACTACCGCATCATAGACGTCAAaac < 2:1751617/140‑1 (MQ=255) tCCAGCCATAAAACAAATCACCACGGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTGCAGCAGACTACCGCATCATAGACGGCAAaacaa < 1:2348226/140‑1 (MQ=255) tCCAGCCAGAAAAAAAATCACCACTGAACTCAAAAACCCCTTTACGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTGCAGCAGACTACCGCATCATAGACGGCAAaacaa < 1:1005690/140‑1 (MQ=255) tCCAGCCACCAAACAACCCACCACGGCCCTCCACAAAGCCTTTCAGCCCAACGACGCCATTTTGGGGGCAGAGCAGCCTGAGCAATGCAAAGCCAGAGCACCCTTTGCAGCAGACTACCCCATCATAGACGCCAAaacca < 2:2097101/140‑3 (MQ=255) tCCACCCAGAAAACAAATCACCACTGAACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTGCAGCAGACTACCGCATCATAGACGGCAAaacaa < 1:2100454/140‑1 (MQ=255) tCCACCCAGAAAAAAAATCACCACTTCACTTAAAAAACCATTAAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTGCAGCAGACTACCGCATCATAGACGGCAAaacaa < 1:1315166/140‑1 (MQ=255) accacccatAAAAAAAATCACCCCTGCACTACAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTGCAGCAGACTACCGCATCATAGACGGCAAaacaa < 1:791770/139‑1 (MQ=255) ccagccagAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTGCAGCAGACTACCGCATCATAGACGGCAAaacaac > 1:1607076/1‑140 (MQ=255) ccagccagAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATGTTGGTGGCAGAGCATCCTGATCAATGCAAAGAGATAGCGCCCTGTGCAGCAGACTAGCGCAGCCTAGACGGCAAaacagg > 1:1964803/1‑138 (MQ=255) ccagccagAAAACAAATCACCACTGCACTTCAAAAAGCCATTAAGCCCAACGACTCCCTTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTGCAGCAGACTACCGCATCAAAGACGGCAAaacaac > 2:666836/1‑140 (MQ=255) | AAAGCAGAAACGATGTTTTCTGTGTTCAAGCCGGATATCGAAGCGTATCCGAGCGGCCATGCTTTCTTTATGCAAAGCGTGTTAAAGCATGTGATGCCTAAAAAGGAAATCGTTATTTTTGGCAGCGCAGACGATCCAGCCAGAAAACAAATCACCACTGCACTTCAAAAAGCCTTTAAGCCCAACGACTCCATTTTGGTGGCAGAGCATCCTGATCAATGCAAAGACATAGCACCCTTTGCAGCAGACTACCGCATCATAGACGGCAAAACAAC > NZ_CP034943/4022486‑4022760 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |