| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 506,292 | G→C | 5.6% | V277V (GTG→GTC) | EO946_RS02595 → | cation diffusion facilitator family transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 506,292 | 0 | G | C | 5.6% | 522.8 / 16.0 | 157 | V277V (GTG→GTC) | EO946_RS02595 | cation diffusion facilitator family transporter |
| Reads supporting (aligned to +/- strand): ref base G (83/64); new base C (5/4); total (88/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 162 total aligned reads displayed.
AAAGATGTGAAAGCGAGGTATCTAGGAAGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAGGCGTTTTGGCATTGGCGCTGTGAAGGTGAGCTGTTTTTTCA > NZ_CP034943/506155‑506430 | aaaGATGTGAAAGCGAGGTATCTAGGAAGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGAc < 1:2294020/140‑1 (MQ=255)aaaGATGTGAAAGCGAGGTATCTAGGAAGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGAc < 1:378106/140‑1 (MQ=255)aaaGATGTGAAAGAGAGGTATCTAGGAAGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTAAAGTAGAAGTAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGAc < 1:2194528/140‑1 (MQ=255) gATGTGAAAGCGAGGTATCTAGGAAGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACtca < 2:1626698/140‑1 (MQ=255) gtgAAAGCGAGGTATCTAGGAAGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACTGTAGAAGACGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAAGAAAACATGAACACGATGTGACtcatgt > 1:1786731/1‑140 (MQ=255) gtgAAAGCGAGGTATCTAGGAAGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACtcatgt > 1:1266435/1‑140 (MQ=255) tgAAAGCGAGGTATCTAGGAAGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACtcatgtt < 1:1573420/140‑1 (MQ=255) aaaGCGAGGTATCTAGGAAGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACtcatgttca < 2:836695/140‑1 (MQ=255) aaaGCGAGGTATCTAGGAAGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACtcatgttca < 2:1137885/140‑1 (MQ=255) aaaGCGAGGTATCTAGGAAGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACtcatgttca < 2:38407/140‑1 (MQ=255) cGAGGTATCTAGGAAGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACtcatgttcatgtt < 1:1026072/140‑1 (MQ=255) cGAGGTATCTAGGAAGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACtcatgttcatgtt < 1:1590544/140‑1 (MQ=255) cGAGGTATCTAGGAAGCACAGGTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACtcatgttcatgtt < 2:2052451/140‑1 (MQ=255) aGGTATCTAGGAAGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACtcatgttcatgttca > 2:1276743/1‑140 (MQ=255) aGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTga < 1:1544804/140‑1 (MQ=255) aGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTga < 2:1398557/140‑1 (MQ=255) aGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTga > 1:450759/1‑140 (MQ=255) aGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTga < 1:1276743/140‑1 (MQ=255) aGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTga > 1:702017/1‑140 (MQ=255) aGCACAGGTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTga < 1:2231223/140‑1 (MQ=255) gtacaGTTCATATCGAGATGGTGATTACGGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCGGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTCACTCATGTTCATGTTCATGTAGAGCCTgac > 2:2075813/3‑140 (MQ=255) gtacaGTTCATATCGAGATGGTGATTACGGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCGGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTCACTCATGTTCATGTTCATGTAGAGCCTgac > 2:860872/3‑140 (MQ=255) gCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTgac > 1:1458836/1‑140 (MQ=255) gCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTgac > 1:2341698/1‑140 (MQ=255) cacaGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTgacg > 1:1648179/1‑140 (MQ=255) aGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACa < 1:144796/140‑1 (MQ=255) aGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACa < 1:1922052/140‑1 (MQ=255) aGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACa < 2:1519612/140‑1 (MQ=255) aGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACa < 1:797617/140‑1 (MQ=255) aGTTCATATCGAAAGGGTCATTCCAGGTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACa < 1:1945120/140‑1 (MQ=255) ttCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACtc < 2:1944576/108‑1 (MQ=255) atCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATa > 1:869542/1‑140 (MQ=255) aaaTGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCCTGTAGAGCCTGACGACATAAAATAAGGc > 2:1430994/1‑140 (MQ=255) aaaTGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGc > 2:2248788/1‑140 (MQ=255) aaaTGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGc > 2:954541/1‑140 (MQ=255) aaaTGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGc > 2:396221/1‑140 (MQ=255) aaTGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCt > 1:958157/1‑140 (MQ=255) aaTGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCt > 2:1210200/1‑140 (MQ=255) gTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGttt < 1:2271503/140‑1 (MQ=255) gTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGttt < 1:1719895/140‑1 (MQ=255) gTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGttt > 2:1651502/1‑140 (MQ=255) aCAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGaa < 2:1780453/140‑1 (MQ=255) aCAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGaa < 2:2341698/140‑1 (MQ=255) aCAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGaa < 2:2009039/140‑1 (MQ=255) cAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAAt < 1:1090096/140‑1 (MQ=255) cAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGAAATAAAATAAGGCTTTTTAACGAAt < 1:241450/140‑1 (MQ=255) tttaTCCTAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATTTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAg < 2:109291/137‑1 (MQ=255) ttGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGCCAAAATAAAACATGAAAACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTTTTTAACGAATTAg < 1:2362574/140‑1 (MQ=255) tGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAACCATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGc < 1:2197874/140‑1 (MQ=255) tGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGc < 1:1447742/140‑1 (MQ=255) aTCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGTCCGATGAAGTAGAATGCAAAATAAATCATGAACACGATGTGACTCATGTTCATGATAATGTATAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCtt > 1:847837/1‑140 (MQ=255) aTCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTa < 1:1121855/128‑1 (MQ=255) aTCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCtt > 1:691164/1‑140 (MQ=255) aTCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCtt > 1:658357/1‑140 (MQ=255) aTCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCtt > 1:1985861/1‑140 (MQ=255) gCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGtt > 1:1783255/1‑140 (MQ=255) tAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAAt < 1:1912792/119‑1 (MQ=255) tAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAAt > 2:1914362/1‑119 (MQ=255) aagaagGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACtcatgttcatg < 1:462576/72‑1 (MQ=255) aagaagGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAAt > 1:602500/1‑140 (MQ=255) aagaagGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAAt > 2:1934327/1‑140 (MQ=255) aagaagGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAAt > 1:2388299/1‑140 (MQ=255) aagaagGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTCACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGATTATATGTTCAGATAAAAAt > 1:2111179/1‑140 (MQ=255) ggCCATGGAGTGGCAGATGACGTAGAAGACACAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATCTGTTCAGATAAAAATTCAGt > 1:1358852/1‑140 (MQ=255) ggCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGt > 1:1202898/1‑140 (MQ=255) ggCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGt > 1:1693790/1‑140 (MQ=255) ggCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGt > 2:440985/1‑140 (MQ=255) ggCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGt > 1:974034/1‑140 (MQ=255) ggCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGt > 2:830841/1‑140 (MQ=255) ggCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGt > 1:542418/1‑140 (MQ=255) ccATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAgg > 2:593464/1‑96 (MQ=255) ccATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAgg < 1:593464/96‑1 (MQ=255) cATGGAGTGGCGGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTCACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGACTTAGCTTATATGTTCAGATAAAAATTCAGTCAc < 1:137294/140‑1 (MQ=255) cATGGAGTGGCGGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTCACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCAc < 1:2075813/140‑1 (MQ=255) cATGGAGTGGCGGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTCACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCAc < 1:2076319/140‑1 (MQ=255) tGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCActt > 1:893213/1‑140 (MQ=255) tGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCActt > 2:577739/1‑140 (MQ=255) tGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCActt > 2:46526/1‑140 (MQ=255) tGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCActt > 2:66575/1‑140 (MQ=255) tGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCActt > 1:1398729/1‑140 (MQ=255) tGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGAAGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCActt > 2:295391/1‑140 (MQ=255) tGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCa > 2:1695005/1‑140 (MQ=255) tGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCa > 2:259407/1‑140 (MQ=255) tGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGGTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCa > 2:900577/1‑140 (MQ=255) gCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAgg > 2:2274553/1‑140 (MQ=255) gCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAgg > 2:2142035/1‑140 (MQ=255) gCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAgg > 2:1529056/1‑140 (MQ=255) agaagaCAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAGGCGTTTTGGCAt < 1:1533362/140‑1 (MQ=255) agaagaCAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAGGCGTTTTGGCAt < 1:1538160/140‑1 (MQ=255) agaCAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAGGCGTTTTGGCATTgg > 1:1861854/1‑140 (MQ=255) agaCAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAGGCGTTTTGGCATTgg < 2:672902/140‑1 (MQ=255) agaCAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAGGCGTTTTGGCATTgg > 1:2258110/1‑140 (MQ=255) acaacaTAAAACATGAACAAGATGTGACTCATCTTCATGTTCATGTAGAGCCTGACGACATAAAATAACGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAGGCGTTTTGGCATTGgcg < 1:1041430/140‑1 (MQ=255) aCAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAGGCGTTTTGGCATTGgcg < 1:437606/140‑1 (MQ=255) aCAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAGGCGTTTTGGCATTGgcg < 2:876002/140‑1 (MQ=255) aCAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAGGCGTTTTGGCATTGgcg < 1:46526/140‑1 (MQ=255) aaTAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAGGCGTTTTGGCATTGGCGCtgt > 1:908832/1‑140 (MQ=255) tgtgACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAGGCGTTTTGGCATTGGCGCTGTGAAGGTGAGCTGtttttt < 2:1985861/140‑1 (MQ=255) tgtgACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAGGCGTTTTGGCATTGGCGCTGTGAAGGTGAGCTGtttttt > 2:1865305/1‑140 (MQ=255) tgtgACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAGGCGTTTTGGCATTGGCGCTGTGAAGGTGAGCTGtttttt > 2:1865088/1‑140 (MQ=255) | AAAGATGTGAAAGCGAGGTATCTAGGAAGCACAGTTCATATCGAAATGGTCATTACAGTTGATCCGAAGCTTACAGTAGAAGAAGGCCATGGAGTGGCAGATGAAGTAGAAGACAAAATAAAACATGAACACGATGTGACTCATGTTCATGTTCATGTAGAGCCTGACGACATAAAATAAGGCTGTTTAACGAATTAGCTTATATGTTCAGATAAAAATTCAGTCACTTCTTCAGGCGTTTTGGCATTGGCGCTGTGAAGGTGAGCTGTTTTTTCA > NZ_CP034943/506155‑506430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |