| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 523,388 | G→A | 5.3% | A228A (GCG→GCA) | EO946_RS02705 → | RNA‑binding transcriptional accessory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 523,388 | 0 | G | A | 5.3% | 357.6 / 6.7 | 112 | A228A (GCG→GCA) | EO946_RS02705 | RNA‑binding transcriptional accessory protein |
| Reads supporting (aligned to +/- strand): ref base G (52/54); new base A (3/3); total (55/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.21e-01 | |||||||||||
Only 100 of 116 total aligned reads displayed.
CCAGGAAACCTTTAAAAGAGGAACCATTAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAG > NZ_CP034943/523253‑523527 | ccAGGAAACCTTTAAAAGAGGAACCATTAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGa > 1:2231671/1‑140 (MQ=255)ccAGGAAACCTTTAAAAGAGGAACCATTAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGa > 1:2175640/1‑140 (MQ=255)ccAGGAAACCTTTAAAAGAGGAACCATTAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGa > 1:595394/1‑140 (MQ=255)ccAGGAAACCTTTAAAAGAGGAACCATTAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGa > 1:1905465/1‑140 (MQ=255)ccAGGAAACCTTTAAAAGAGGAACCATTAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGa > 1:1406555/1‑140 (MQ=255)ccAGGAAACCTTTAAAAGAGGAACCATTAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAACTCGTTCCGCACAGGGTGCTGGCGATGa > 1:2231573/1‑140 (MQ=255) gAAACCTTTAAAAGAGGAACCATTAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACcg < 2:36472/140‑1 (MQ=255) ctatAAAAGAGGAACCCTTAAGTATACAGCCCGAAAATCCGCAGACACAGACGAGAAAAATGTGTATGAAATGTAGTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCgcggcg < 1:1860575/137‑1 (MQ=255) cTTCAAAAGAGGAACCATTAAGTCTGCAGCCGGAAAGTCGGCAGACACCGATGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTTGTTCCGCATAGGGTGCTGGCAATGAACCgcggcg > 1:176306/1‑140 (MQ=255) ggAACCATTAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTTTGATATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGACGa < 2:1813131/140‑1 (MQ=255) ggAACCATTAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGa < 1:1029228/140‑1 (MQ=255) ggAACCATTAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGa < 1:2369992/140‑1 (MQ=255) ggAACCATTAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGa < 2:124176/140‑1 (MQ=255) ggAACCATTAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGa < 2:926264/140‑1 (MQ=255) ggAACCATTAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGa < 2:2396359/140‑1 (MQ=255) ggAACCATTAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGa < 1:1091024/140‑1 (MQ=255) ggAACCATTAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGa < 1:1172135/140‑1 (MQ=255) ggAACCATCAAGTCTACAGCCGGAAAATCTGCAGACACAGACGAGAAAAATGTGTATGAAATCTATTCCGAGTATGAAGCGCCAAGTGCAACAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGa < 1:98127/140‑1 (MQ=255) ttAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTa > 2:207757/1‑140 (MQ=255) ttAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTa < 2:89332/140‑1 (MQ=255) tCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGCCATTTTAAAGgt < 1:575412/140‑1 (MQ=255) tCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGgt < 1:266239/140‑1 (MQ=255) tCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGgt < 2:500197/140‑1 (MQ=255) tCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGgt < 1:657538/140‑1 (MQ=255) aCAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTc > 1:1857978/1‑140 (MQ=255) ccGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAACAGGAAGACATTTTAAAGGTGTCTATc > 1:494304/1‑140 (MQ=255) gAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAACAGGAAGACCTTTGACAGGTGTCTATCGac > 2:1766834/1‑139 (MQ=255) gAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGaa > 1:1937475/1‑140 (MQ=255) gAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGaa > 1:2237553/1‑140 (MQ=255) gAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGaa > 1:1842149/1‑140 (MQ=255) aaaaTCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGGTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGCCATTTTAACGGGGTCTATCGAAc < 2:153547/140‑1 (MQ=255) aTCGGCAGACACAGACGAGAAACATGTGTATGAAAAGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGCCATTTTAAAGGTGTCTATCGAACCGc < 1:991680/140‑1 (MQ=255) aTCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGc < 1:1042743/140‑1 (MQ=255) ggCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTg > 1:1406224/1‑140 (MQ=255) ggCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTg > 1:2177637/1‑140 (MQ=255) ggCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTg < 1:2130396/140‑1 (MQ=255) ggCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGAAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACTTTTTAAAGGTGTCTATCGAACCGCCTg < 1:536985/140‑1 (MQ=255) gACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGa < 1:2273533/140‑1 (MQ=255) gACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGa < 2:101867/140‑1 (MQ=255) gACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGa < 1:839881/140‑1 (MQ=255) gACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGGTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGa < 1:643609/140‑1 (MQ=255) acacAGACGAGAAAAATGTTTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGAt < 1:1162247/140‑1 (MQ=255) acacAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGAt < 2:2177637/140‑1 (MQ=255) acacAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGAt < 2:1406224/140‑1 (MQ=255) acacAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGAt < 1:1239192/140‑1 (MQ=255) agaAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAg < 2:333598/140‑1 (MQ=255) gaAAAATGTGTATGAAATGTATTACGAGTATGAAGATCCAATTGCAAAAGTAGTTCCGCACATGTTGCTGGCGATGAACCGCGGCTAAAAGGAAGACATTTTAAAGGTGTATATCGAACCGCCTGCGGATCACATTAAgg > 2:1946345/1‑140 (MQ=255) gaAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAgg > 2:240265/1‑140 (MQ=255) tATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGa > 2:1689453/1‑140 (MQ=255) aTGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTCAGGCGTATTTAGAAAAACa > 2:2318758/1‑140 (MQ=255) aTGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACa > 2:2105465/1‑140 (MQ=255) ggaTTACGAGTATGAAGAGCCACTTGCAAAAGTCGTTCCGCACAGTGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGa < 2:744650/138‑1 (MQ=255) gTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGa > 2:1741862/1‑140 (MQ=255) ttACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGatca > 1:888498/1‑140 (MQ=255) ttACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGatca > 1:107193/1‑140 (MQ=255) aGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCaaa > 2:289473/1‑140 (MQ=255) gTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGgtgt < 1:1926403/83‑1 (MQ=255) gTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGgtgt > 2:1926403/1‑83 (MQ=255) aTGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGa > 2:2251/1‑67 (MQ=255) aTGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGa < 1:2251/67‑1 (MQ=255) aTGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCg < 2:2125062/98‑1 (MQ=255) aTGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCg > 1:2125062/1‑98 (MQ=255) aaGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGc > 2:1220583/1‑140 (MQ=255) agagCCAATTGCAAAAGTTGTTCCGCATAGGGTGCTGGCAATGAACCGCGGCGAAAAAGAAGACATTTTAAAGGTAGCGATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAAATCATCAAAAATCGCt < 1:1809671/140‑1 (MQ=255) ccAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGa > 2:830865/1‑92 (MQ=255) ccAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGa < 1:830865/92‑1 (MQ=255) ccAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCt < 1:154831/136‑1 (MQ=255) ccAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAAc > 2:2357383/1‑140 (MQ=255) ccAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAAc > 2:246343/1‑140 (MQ=255) ccAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAAc > 2:136972/1‑140 (MQ=255) ccAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAAc > 2:1144730/1‑140 (MQ=255) ccAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAAc > 2:35065/1‑140 (MQ=255) ccAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACAAGTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAAc > 2:2222603/1‑140 (MQ=255) cacttGCAAAAGTCGTTCCGCACACGGTGCTGGCGATGAACCGCGGCGAAATGGAAGACATTGTAAATCTGACTATCGAACCGGCTGCGGATCAAATTAACGCGTATTTAGAACAACATATCATCAAAAACCGCTCAACg > 2:844488/4‑140 (MQ=255) cAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGCAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACAGTCCGGCGTATTTAGAAAAACAGATCTTCAAAAACCGCTccagg > 2:1648864/1‑136 (MQ=255) cAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTCGAAAAACAGATCATCAAAAACCGCTCAACg > 2:1340868/1‑140 (MQ=255) aaTTGCAAAAGTTGTTCCGCATAGGGTGCTGGCAATGAACCGCGGCGAAAAAGAAGACATTTTAAAGGTAGCGATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAAATCATCAAAAATCGCTCAAcat > 2:933943/1‑138 (MQ=255) aaaaGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTaa > 1:1376691/1‑140 (MQ=255) aaGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTaaaa > 1:845804/1‑140 (MQ=255) cataGGGTGCTGGCAATGAACCGCGGCGAAAAAGAAGACATTTTAAAGGTAGCGATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAAATCATCAAAAATCGCTCAACATCCGTAAGAGAGATTTTGCa < 1:933943/137‑1 (MQ=255) cataGGGTGCTGGCAATGAACCGCGGCGAAAAAGAAGACATTTTAAAGGTAGCGATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAAATCATCAAAAATCGCTCAACATCCGTAAGAGAGATTTTGCa < 1:933982/137‑1 (MQ=255) agtgTGCTTGCGATTAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGa < 2:1905465/137‑1 (MQ=255) aGGGTGCTGTCGATGAACCGCGGCGAAAAGGAAGACATTTTATAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAATCAGATCATCAAAAACCGCTCAACGTCAGTAAAAGAGATTTTGCAAGa < 2:882024/140‑1 (MQ=255) aGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAATGAGATTTTGCAAGa < 2:595394/140‑1 (MQ=255) aGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGa < 2:2231573/140‑1 (MQ=255) aGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGa < 1:2115851/140‑1 (MQ=255) aGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGa < 1:982986/140‑1 (MQ=255) aGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGa < 2:1406555/140‑1 (MQ=255) aGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGa < 2:2231671/140‑1 (MQ=255) aGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGa < 2:2175640/140‑1 (MQ=255) ggTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTACAAGAGATTTTGCAAGaaa > 1:591952/1‑140 (MQ=255) ggTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGaaa > 1:377660/1‑140 (MQ=255) tGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGa > 1:1986456/1‑61 (MQ=255) tGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGa < 2:1986456/61‑1 (MQ=255) tGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGAtt > 1:2409749/1‑140 (MQ=255) cGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGaa < 2:1376691/140‑1 (MQ=255) gATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAg < 2:2409749/140‑1 (MQ=255) gATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAg < 1:1906061/140‑1 (MQ=255) gATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAg < 1:1894440/140‑1 (MQ=255) gATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAg < 1:582183/140‑1 (MQ=255) | CCAGGAAACCTTTAAAAGAGGAACCATTAAGTCTACAGCCGGAAAATCGGCAGACACAGACGAGAAAAATGTGTATGAAATGTATTACGAGTATGAAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAG > NZ_CP034943/523253‑523527 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |