| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 523,484 | C→T | 5.2% | N260N (AAC→AAT) | EO946_RS02705 → | RNA‑binding transcriptional accessory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 523,484 | 0 | C | T | 5.2% | 373.5 / 6.8 | 115 | N260N (AAC→AAT) | EO946_RS02705 | RNA‑binding transcriptional accessory protein |
| Reads supporting (aligned to +/- strand): ref base C (60/49); new base T (2/4); total (62/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.06e-01 | |||||||||||
Only 100 of 115 total aligned reads displayed.
AAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCGGATGAGCAGGCCATTCACATTTTCT > NZ_CP034943/523348‑523620 | aaGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGc > 2:1220583/1‑140 (MQ=255) agagCCAATTGCAAAAGTTGTTCCGCATAGGGTGCTGGCAATGAACCGCGGCGAAAAAGAAGACATTTTAAAGGTAGCGATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAAATCATCAAAAATCGCt < 1:1809671/140‑1 (MQ=255) ccAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCt < 1:154831/136‑1 (MQ=255) ccAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAAc > 2:35065/1‑140 (MQ=255) ccAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAAc > 2:774477/1‑140 (MQ=255) ccAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAAc > 2:246343/1‑140 (MQ=255) ccAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAAc > 2:1144730/1‑140 (MQ=255) ccAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAAc > 2:2357383/1‑140 (MQ=255) cacttGCAAAAGTCGTTCCGCACACGGTGCTGGCGATGAACCGCGGCGAAATGGAAGACATTGTAAATCTGACTATCGAACCGGCTGCGGATCAAATTAACGCGTATTTAGAACAACATATCATCAAAAACCGCTCAACg > 2:844488/4‑140 (MQ=255) cAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGCAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACAGTCCGGCGTATTTAGAAAAACAGATCTTCAAAAACCGCTccagg > 2:1648864/1‑136 (MQ=255) cAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTCGAAAAACAGATCATCAAAAACCGCTCAACg > 2:1340868/1‑140 (MQ=255) aaTTGCAAAAGTTGTTCCGCATAGGGTGCTGGCAATGAACCGCGGCGAAAAAGAAGACATTTTAAAGGTAGCGATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAAATCATCAAAAATCGCTCAAcat > 2:933943/1‑138 (MQ=255) aaTTGCAAAAGTTGTTCCGCATAGGGTGCTGGCAATGAACCGCGGCGAAAAAGAAGACATTTTAAAGGTAGCGATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAAATCATCAAAAATCGCTCAAcat > 2:933982/1‑138 (MQ=255) aaaaGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTaa > 1:1376691/1‑140 (MQ=255) cataGGGTGCTGGCAATGAACCGCGGCGAAAAAGAAGACATTTTAAAGGTAGCGATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAAATCATCAAAAATCGCTCAACATCCGTAAGAGAGATTTTGCa < 1:933982/137‑1 (MQ=255) cataGGGTGCTGGCAATGAACCGCGGCGAAAAAGAAGACATTTTAAAGGTAGCGATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAAATCATCAAAAATCGCTCAACATCCGTAAGAGAGATTTTGCa < 1:933943/137‑1 (MQ=255) agtgTGCTTGCGATTAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGa < 2:1905465/137‑1 (MQ=255) aGGGTGCTGTCGATGAACCGCGGCGAAAAGGAAGACATTTTATAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAATCAGATCATCAAAAACCGCTCAACGTCAGTAAAAGAGATTTTGCAAGa < 2:882024/140‑1 (MQ=255) aGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAATGAGATTTTGCAAGa < 2:595394/140‑1 (MQ=255) aGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGa < 2:1406555/140‑1 (MQ=255) aGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGa < 1:982986/140‑1 (MQ=255) aGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGa < 1:2115851/140‑1 (MQ=255) aGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGa < 2:1906166/140‑1 (MQ=255) aGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGa < 2:2231573/140‑1 (MQ=255) aGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGa < 2:2175640/140‑1 (MQ=255) aGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGa < 2:2231671/140‑1 (MQ=255) ggTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTACAAGAGATTTTGCAAGaaa > 1:591952/1‑140 (MQ=255) tGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGAtt > 1:2409749/1‑140 (MQ=255) cGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGaa < 2:1376691/140‑1 (MQ=255) gATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAg < 1:582183/140‑1 (MQ=255) gATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAg < 1:1906061/140‑1 (MQ=255) gATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAg < 2:2409749/140‑1 (MQ=255) aTGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAAc > 1:1813044/1‑104 (MQ=255) aTGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAAc < 2:1813044/104‑1 (MQ=255) aTGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGa > 2:1287928/1‑140 (MQ=255) aTGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGa > 2:953145/1‑140 (MQ=255) aTGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGa > 2:1607811/1‑140 (MQ=255) aTGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGa > 2:931285/1‑140 (MQ=255) aTGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACAAGAAGGCGTAATTAGAAAAACAGATCATCAAAAACCTCTCAACGACGGTAAAAGAGATATTGATAGAAAAGATTTAAGa > 2:1647661/1‑140 (MQ=255) tGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGAc < 2:1842149/140‑1 (MQ=255) tGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGAc < 2:1937475/140‑1 (MQ=255) tGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGAc < 2:55263/140‑1 (MQ=255) gAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGAcc > 2:317793/1‑139 (MQ=255) ccccGCGGCGAAAAGTAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATGAGATTAAGTCGTATTTAGAAAAACTGAGGATCAAACACGGCTGATCGTCCGTAAAAGAGATTTTTCAAGAAACGTTTGAagagag < 2:1822893/138‑1 (MQ=255) aaCCGCGGCGAAAATGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAg < 1:1832828/140‑1 (MQ=255) aaCCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAACGAGATTTTGCAAGAAACGCTTGAAGACAg < 2:1531351/140‑1 (MQ=255) aaCCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAg < 2:52773/140‑1 (MQ=255) aaCCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAg < 1:2302080/140‑1 (MQ=255) aaCCGCGCCGAACAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACACATCCTCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAg < 2:1817722/140‑1 (MQ=255) cggcgAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCtata > 2:112838/1‑140 (MQ=255) ggcgAAATGGAAGACATTTTAAAGTTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATaa < 1:73492/140‑1 (MQ=255) ggcgAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATaa < 2:2421008/140‑1 (MQ=255) ggcgAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATaa < 1:90550/140‑1 (MQ=255) aaaaGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGa < 1:314401/140‑1 (MQ=255) aaGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATc < 1:931285/140‑1 (MQ=255) cATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGc < 1:203822/140‑1 (MQ=255) cATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGc < 2:2237553/140‑1 (MQ=255) tCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCg > 1:1443294/1‑140 (MQ=255) tCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCg > 1:550070/1‑140 (MQ=255) cgaTCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAAATCATCAAAAATCGCTCAACATCCGTAAGAGAGATTTTGCAGGAGACAATTGAAGACAGCTATAAAAGGCTGATCCAGCCGGCAATCGAGCGt < 2:176306/138‑1 (MQ=255) aaCCGCCTGCGGATCAGATTAAGGCGTATTTAGAAAAACAGATCATCAAAAGCCGCTCAACGTCCGTAAAAGAGATTTGGCACGAAACGATTGAAGAGAGCTATAAAAGACTGAGCCAGCCGGCGATAGAGCGTGAAATc > 1:1396461/1‑140 (MQ=255) aaCCGCCTGCGGATCACATTAAGGCGTATTTAGAAACACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATc > 1:1284860/1‑140 (MQ=255) aaCCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATc > 1:1837133/1‑140 (MQ=255) aaCCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATc > 1:969109/1‑140 (MQ=255) aaCCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAACAAACGATTGAAGACAGCTATAAAAGACTGATCCAGACGGCGATAGAGCGTGAAAta > 1:1427547/1‑139 (MQ=255) ccTGCGGATCACATTAAGGCGTATTTAGCAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATACAAGACTGATCCAGCCGGCTATAGAGCGTGAAATCAGaaa > 2:393031/1‑140 (MQ=255) ccTGCGGATCACATTAAGGCGTATTTAGAAACACAGATCATCAAAAACCGCTCAACGTCCGTCAAAGAGATTTTGCAAGAAACGATGGAAGACAGCTATAAAAGTCTGATCCAGCCGGCGATAGAGCGGGAAATCAGaca > 1:2060461/1‑138 (MQ=255) ccTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGc < 1:2244338/115‑1 (MQ=255) ccTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGc > 2:2244338/1‑115 (MQ=255) ccTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGaaa > 2:498088/1‑140 (MQ=255) ccTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGaaa > 1:1890115/1‑140 (MQ=255) ccTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGaaa > 2:2269497/1‑140 (MQ=255) ccTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGaaa > 2:2372160/1‑140 (MQ=255) tGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAag > 1:2129807/1‑140 (MQ=255) cGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAagag < 1:623289/140‑1 (MQ=255) caTTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATCGAGCGGGAAATCAGAAAAGAGCTGTCAg > 2:128246/1‑140 (MQ=255) cGTATTTAGAAAAACAGATCATCAACAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCg < 1:553984/140‑1 (MQ=255) cGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCg < 1:2335218/140‑1 (MQ=255) cGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCg < 1:1417853/140‑1 (MQ=255) gTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCgg < 1:35065/140‑1 (MQ=255) gTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCgg < 1:1863934/140‑1 (MQ=255) tATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGAc < 1:653395/72‑1 (MQ=255) tATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGAc > 2:653395/1‑72 (MQ=255) tATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAg < 2:2308381/74‑1 (MQ=255) tATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAg > 1:2308381/1‑74 (MQ=255) tATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCGGa > 2:2202216/1‑140 (MQ=255) tATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCGGa > 2:800582/1‑140 (MQ=255) tATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCGGa > 2:428379/1‑140 (MQ=255) aTTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCGGAt > 2:79089/1‑140 (MQ=255) aTTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCGGAt > 2:1219954/1‑140 (MQ=255) aGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGa > 2:1489008/1‑59 (MQ=255) aaaaaCAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCGGATGAGCAg > 2:672370/1‑140 (MQ=255) aaaaaCAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCGGATGAGCAg > 2:683357/1‑140 (MQ=255) aaaaaCAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCGGATGAGCAg > 2:2341696/1‑140 (MQ=255) aaCAGATCATCAAAAACCGCTCAACGTCCTTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCGGATGAGCAGGcc > 2:1542344/1‑140 (MQ=255) aaCAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCGGATGAGCAGGcc > 2:1542330/1‑140 (MQ=255) aGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGACCTGTCAGAAAAAGCGGATGAGCAGGCCAtt < 1:235699/140‑1 (MQ=255) atcatcAAAAACCGCTCAACGTCCGTAAAATAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCGGATGATCAGGCCATTca > 1:1149714/1‑140 (MQ=255) aaaCCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCGGATGAGCAGGCCATTCACATTTtct > 2:897143/1‑140 (MQ=255) aaaCCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCGGATGAGCAGGCCATTCACATTTtct > 2:1435595/1‑140 (MQ=255) | AAGAGCCAATTGCAAAAGTCGTTCCGCACAGGGTGCTGGCGATGAACCGCGGCGAAAAGGAAGACATTTTAAAGGTGTCTATCGAACCGCCTGCGGATCACATTAAGGCGTATTTAGAAAAACAGATCATCAAAAACCGCTCAACGTCCGTAAAAGAGATTTTGCAAGAAACGATTGAAGACAGCTATAAAAGACTGATCCAGCCGGCGATAGAGCGTGAAATCAGAAAAGAGCTGTCAGAAAAAGCGGATGAGCAGGCCATTCACATTTTCT > NZ_CP034943/523348‑523620 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |