Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NZ_CP034943 607,359 A→C 8.3% T68P (ACC→CCC)  EO946_RS03185 → collagen‑like protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP034943607,3590AC 8.3% 160.7 / 2.6 81T68P (ACC→CCC) EO946_RS03185collagen‑like protein
Reads supporting (aligned to +/- strand):  ref base A (29/43);  new base C (2/7);  total (31/50)
Fisher's exact test for biased strand distribution p-value = 4.71e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTA  >  NZ_CP034943/607221‑607494
                                                                                                                                          |                                                                                                                                       
gCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAAc                                                                                                                                        <  1:309063/140‑1 (MQ=255)
gCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAAc                                                                                                                                        <  1:411069/140‑1 (MQ=255)
     gggAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTGCCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAg                                                                                                                                   >  1:1248385/1‑140 (MQ=255)
     gggAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAg                                                                                                                                   <  2:523384/140‑1 (MQ=255)
         gCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCCACCGGAGCCACAGGAGCGACCGGCGCAGCCGCACCAGCCGGACCAACCGGAGCGAc                                                                                                                               >  2:2393923/1‑140 (MQ=17)
          cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGCCAGGAGCTACCGGTCACGCCGGACCATCAGCCCCAACCGCAGCCACg                                                                                                                              >  2:1857530/1‑140 (MQ=18)
          cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACg                                                                                                                              >  2:452091/1‑140 (MQ=255)
          cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACg                                                                                                                              >  1:1078339/1‑140 (MQ=255)
          cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACg                                                                                                                              >  1:1181757/1‑140 (MQ=255)
            tcTGGGGAAGCTGGACCAGCCGGACCAGCCGGACCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGGGACTGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACggg                                                                                                                            <  2:664808/139‑1 (MQ=255)
            ccTGGCGAAGCTGGACCAGCCGGACCAGCCGGCGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACggg                                                                                                                            <  1:1488652/139‑1 (MQ=255)
            aCTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGTGCGACggg                                                                                                                            <  2:1820906/140‑1 (MQ=255)
            aCTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACggg                                                                                                                            >  1:1204154/1‑140 (MQ=255)
            aCTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACggg                                                                                                                            <  1:144402/140‑1 (MQ=255)
            aCTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACggg                                                                                                                            <  2:14235/140‑1 (MQ=255)
            aCTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACggg                                                                                                                            <  2:1599185/140‑1 (MQ=255)
             cTGGGGCAGCTGGACCAGCCGGACCAGCCGGAGCCACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGa                                                                                                                           <  2:399703/140‑1 (MQ=255)
             cTGGGGCAGCTGGACCAGCCGGACCACCCGGAGCCCCGGGAGCCACGGGAGCTCCCGGCGAAGCTGGACCCGCCGGAGCGACGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGa                                                                                                                           <  2:1128971/140‑1 (MQ=21)
             cTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAGCCGGACCAACCGGAGCGACGGGa                                                                                                                           >  1:149/1‑140 (MQ=255)
                  gAAGGTGGACCAGCCGGACCAGGCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCAc                                                                                                                      <  2:2030300/140‑1 (MQ=255)
                  gAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCAc                                                                                                                      <  2:2033502/140‑1 (MQ=255)
                    aGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACgg                                                                                                                    >  1:161305/1‑140 (MQ=255)
                     gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACggg                                                                                                                   >  2:1333327/1‑140 (MQ=255)
                     gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACggg                                                                                                                   <  2:455900/140‑1 (MQ=255)
                       tGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAATCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAg                                                                                                                 >  1:1015621/1‑140 (MQ=255)
                          accagccggaccagccggAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTa                                                                                                              >  1:1586416/1‑140 (MQ=255)
                              gccggaccagccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCGACGGGCGCTCCCgg                                                                                                          >  2:1251896/1‑140 (MQ=255)
                               ccggaccagccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCggg                                                                                                         <  2:1586416/140‑1 (MQ=255)
                               ccggaccagccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCggg                                                                                                         >  1:247143/1‑140 (MQ=255)
                                       tcccgaGCGCCGTGACCCTCTGGCGCTCCCGGGCTATCTGGACGTTCCGGAGCGACGTGAGGGTCAGGAGATACCGGGGAAGCCGGAGCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccgg                                                                                                 <  2:84829/136‑1 (MQ=9)
                                       gccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccgg                                                                                                 <  2:1644300/140‑1 (MQ=255)
                                       gccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCAACCGGGGCAGCCGGACCAGCCGGAGCAACCGGAGCGACGGGAGCCTCCGGAGCACCCGGTGCagccgg                                                                                                 >  2:1603940/1‑140 (MQ=18)
                                        ccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGCCGCCGGTGCTCCCGGGGCggccggg                                                                                                >  2:162936/1‑139 (MQ=14)
                                            cgCGACTGGAGCCACGGGAGCTCCCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccag                                                                                            <  2:1547041/139‑1 (MQ=255)
                                            cgCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccag                                                                                            <  2:341359/139‑1 (MQ=255)
                                            aGCGACGGGAGCTCCGGGAGCGCCCGGGGAACCGGGACACGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGCAGCGACGGTAGCCACGGGAGCTACCGGGGAacccggaccag                                                                                            <  2:712945/140‑1 (MQ=18)
                                            aGCGACGGGAGCCACGGGAGCTCCCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCGACCGGGGAagccggaccag                                                                                            <  2:1365892/140‑1 (MQ=255)
                                            aGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccag                                                                                            <  2:1943820/140‑1 (MQ=255)
                                                 cGGGAGCCACGTGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccagccgga                                                                                       <  2:1473046/140‑1 (MQ=255)
                                                 cGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccagccgga                                                                                       <  2:200314/140‑1 (MQ=255)
                                                 cGGGAGCCACCGGAGCTCCCGGGGCCGCCGGACCACCCGGAGCGACGGGAGCGACCGGAGCGACCGGGGCCGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccagccgga                                                                                       <  2:1953820/140‑1 (MQ=14)
                                                          cGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGCGCTCCCGGGGACGCCGGCCCAGCCGGACCAACCGGAGCGACCGGAGCCCCGGGCGCTCCCGGGGACGCCGGCCCAGCCGGACCAACCggc                                                                              >  1:1361170/1‑139 (MQ=18)
                                                             gAGCTACCGGTGCAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcg                                                                           <  2:665326/140‑1 (MQ=255)
                                                                  aCCGGGGAAGCTGGACCAGCCGGAGCGCCTGGAGCGACAGGAGCTACCGGCGAAGCAGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGTAAGCCGGACCAGCCGGACCAACCggagcgacagg                                                                      <  2:579559/140‑1 (MQ=17)
                                                                  aCCGGGGAAGCTGGACCAGCCGGAGCGCCGGGAGCGACAGGAGCTTCGGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacagg                                                                      <  2:2178504/140‑1 (MQ=255)
                                                                     ggggAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagc                                                                   >  1:1514529/1‑140 (MQ=255)
                                                                     ggggAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACCGGAGCCACGGGAGCTACCGGGGAAGCCGGACACGCCGGACCAACCggagcgacagcaga                                                                   >  1:268425/1‑139 (MQ=255)
                                                                        gAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcgac                                                                <  2:161305/140‑1 (MQ=255)
                                                                           gCTGGACCAGCCGGAGCGCCGGGAGGGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACGGGagcgacaggagcgacagg                                                             <  1:780117/140‑1 (MQ=255)
                                                                           gCTGGACCAGCCGGAGCGAGGGGTGCGACAGGAGCTACCGGGGAAGCCGGACCCGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGagcgacaggagcgacagg                                                             <  1:829245/140‑1 (MQ=255)
                                                                           gCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGagcgacaggagcgacagg                                                             >  2:265949/1‑140 (MQ=255)
                                                                           gCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCGACCGGGGAAGCCGGCCCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGagcgacaggagcgacagg                                                             <  1:608345/140‑1 (MQ=255)
                                                                           gCTGGACCAGCCGGAGCGACGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGCGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGagcgacaggagcgacagg                                                             <  1:1343624/140‑1 (MQ=255)
                                                                           gCTGGACCAGCCGGAGCCACGGGAGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGagcgacaggagcgacagg                                                             <  1:956402/140‑1 (MQ=255)
                                                                             cggACCACCCGGAGCCACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGcgacaggagcgacaggag                                                           <  2:337125/139‑1 (MQ=255)
                                                                                     ccGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTCCCGGGGAAGCCGGACCAGCCGGACCCACCGGAGCGACAGGCGCGACCGGAGCTCCCggg                                                   >  1:1844933/1‑140 (MQ=14)
                                                                                     ccGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCggg                                                   <  1:2242773/140‑1 (MQ=255)
                                                                                         cgtgaagggAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAg                                               <  2:603026/134‑1 (MQ=255)
                                                                                         aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAg                                               >  1:1913676/1‑140 (MQ=255)
                                                                                                      aCAGGAGCGCCCGGGGCAGCCGGACCAGCCGGACAAACCGGAGCGAGTGGAGCCACGGGAGCTAGCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                  <  2:1574501/140‑1 (MQ=17)
                                                                                                        aGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggag                                <  2:2162114/140‑1 (MQ=255)
                                                                                                           aGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGACGCGGGACCAGCAGGACCAACCGGAGCGACAGGAGCGACCGGGGCTACGGGGGACGCCGGACCAGCCggagctc                             >  2:599065/1‑138 (MQ=17)
                                                                                                           aGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCACCCggagcga                             >  2:1563134/1‑140 (MQ=255)
                                                                                                               aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACGGGGGACGCCGGACCAGCCGGAGCAACCGGAGCTACAGCTGCCACTGGAGCACCAGGGCCCGCCCGACCAGCCggcgcgacacg                         >  2:2092632/1‑138 (MQ=14)
                                                                                                                 aggcccagccggacaaccaggaccACCCGGAGCGACGGGAGCCACTGGAGCCACCGGCGAAGCCGGACAAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggag                       <  2:1511384/134‑1 (MQ=17)
                                                                                                                    ggATGCCGGACCCGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcga                    <  1:1383708/140‑1 (MQ=255)
                                                                                                                    ggAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACTGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcga                    <  1:125079/140‑1 (MQ=255)
                                                                                                                     gAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGACGCCGGAGCAGCCggagcgccaggcgcgcc                   >  2:1718794/1‑138 (MQ=14)
                                                                                                                        gctggagcacccggaccaCCCGGAGCGCCGGGAGCCACGGGAGCTACCGGCGCAGCCGGACCAGCCGGACCCCCGGGAGCGACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacagg                <  2:559863/137‑1 (MQ=14)
                                                                                                                        gccggaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGACGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacagg                <  2:2257369/140‑1 (MQ=255)
                                                                                                                        gccggaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAGCCggagcgacaggagcgacagg                >  1:2257369/1‑140 (MQ=255)
                                                                                                                         ccggaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggg               >  1:775240/1‑139 (MQ=255)
                                                                                                                         ccggaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacagga               >  1:1535571/1‑140 (MQ=255)
                                                                                                                              ccagccggcccaACCGGAGCGACGGGAGCCCCGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac          <  2:1078339/140‑1 (MQ=255)
                                                                                                                              ccagccggaccagccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac          <  1:442908/140‑1 (MQ=255)
                                                                                                                              ccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac          <  1:556560/140‑1 (MQ=255)
                                                                                                                              ccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac          <  1:1333327/140‑1 (MQ=255)
                                                                                                                              caagccggaccaACGGGTGGGTCGGGAGCGAGGGGAGCTACCGGGGACGCCGGACCAGCCGGACCACCGGGAGCGACCGGAGCGACAGGAGCTACCGGGGAGGCCGGACCAGCCggagcgacaggagcgacaggagcgac          <  1:1600569/138‑1 (MQ=14)
                                                                                                                                 gccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGCAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGagcgacaggagcgacaggagcgacagg       <  2:847740/140‑1 (MQ=255)
                                                                                                                                  ccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacagg                >  1:1712108/1‑130 (MQ=255)
                                                                                                                                  ccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacagg                <  2:1712108/130‑1 (MQ=255)
                                                                                                                                   cggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAgcgaccggagcgaccggagccacaggac     >  2:1567874/1‑139 (MQ=255)
                                                                                                                                      accaccCGGCGCGACGGCAGCCACCGGCGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTa  <  2:1361170/140‑1 (MQ=14)
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GCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTA  >  NZ_CP034943/607221‑607494

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑