| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 765,082 | T→C | 5.2% | M265T (ATG→ACG) | lplD → | alpha‑galacturonidase LplD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 765,082 | 0 | T | C | 5.2% | 623.4 / 15.6 | 191 | M265T (ATG→ACG) | lplD | alpha‑galacturonidase LplD |
| Reads supporting (aligned to +/- strand): ref base T (91/89); new base C (5/5); total (96/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.92e-01 | |||||||||||
Only 100 of 191 total aligned reads displayed.
CGCCATATTGACCTGCTGCCTATATTCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGAAAACAAGACAGAGACGAGAAACGAAA > NZ_CP034943/764946‑765220 | cGCCATATTGACCTGCTGCCTATATTCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGta < 2:755378/140‑1 (MQ=255)cGCCATATTGACCTGCTGCCTATAGTCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGta < 1:1281681/140‑1 (MQ=255) cATATTGACCTGCTGCCTATATTCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAg > 2:881358/1‑140 (MQ=255) aCCTGCTGCCTATATTCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATc > 2:1626146/1‑140 (MQ=255) aCCTGCTGCCTATATTCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATc > 2:1251850/1‑140 (MQ=255) aCCTGCTGCCTATATTCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATc > 2:1160774/1‑140 (MQ=255) tgctgcCTATATTCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATcccc > 2:712728/1‑140 (MQ=255) ctgcCTATATTCCATGAATTCAGCTCGCATTCTGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGGGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGc > 1:1052602/1‑140 (MQ=255) ctgcCTATATTCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGc > 1:104243/1‑140 (MQ=255) ctgcCTATATTCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGc > 2:1773091/1‑140 (MQ=255) ctgcCTATATTCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGc > 2:1731856/1‑140 (MQ=255) ctgcCTATATTCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGc > 1:2430737/1‑140 (MQ=255) ctgcCTATATTCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGc > 1:1137025/1‑140 (MQ=255) ctgcCTATATTCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGGTTGATTTATTTGAAATGTATAGCGCCATCCCCGc > 1:2255248/1‑140 (MQ=255) gcatataTTACATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTTGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTg < 1:1546504/137‑1 (MQ=255) gcCTATATTCCATGAATTCAGCTCGCATTATGGAGACTCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTg < 1:1779588/140‑1 (MQ=255) gcCTATATTCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTg < 1:1594931/140‑1 (MQ=255) ttCCATGAATTCAGCTCGCATGATGGAGAATCAGGCTATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGa > 2:307089/1‑140 (MQ=255) tCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGAc < 2:1747158/140‑1 (MQ=255) tCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGAc < 2:453514/140‑1 (MQ=255) ctGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAgg > 2:1311065/2‑140 (MQ=255) aTGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAgg > 2:1808702/1‑140 (MQ=255) aTGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAgg > 2:534811/1‑140 (MQ=255) tGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGATGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCTTGTTGCGTGTGAGTTATTTGAAATGTATAGAGCCATCACCGCTGCGGGTGACAGGc > 2:1258291/1‑140 (MQ=255) tGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGc > 2:2124685/1‑140 (MQ=255) tGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGc > 2:485555/1‑140 (MQ=255) tGAATTCAGCGCGCACTATGGGGAATCAGGATATGAGCTGGAGGGGGAATGCTGGAGGGACAGCGTCTTTTGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAACGTATGGCGCCATCCCTGCTGCGGGTGACAGGc > 2:2326920/1‑140 (MQ=255) tGAATTCAGCGCGCACTATGGGGAATCAGGATATGAGCTGGAGGGGGAATGCTGGAGGGACAGCGTCTTTTGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAACGTATGGCGCCATCCCTGCTGCGGGTGACAGGc > 2:1218053/1‑140 (MQ=255) ggAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGc > 2:428607/2‑140 (MQ=255) aaTTCAGCTCGCATTATGGATAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCAt < 1:1497578/140‑1 (MQ=255) aGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGc > 1:1195315/1‑140 (MQ=255) aGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGc < 2:1119128/140‑1 (MQ=255) aGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGc > 2:2073711/1‑140 (MQ=255) gCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCa < 1:31418/140‑1 (MQ=255) gCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCa < 2:1003598/140‑1 (MQ=255) ggAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTcc < 1:712728/140‑1 (MQ=255) cgagaCTCAGGAGCTGAGCTCGAGGCGGAACGCTGGAGGGACACTGTCTTTCGGGCGGCACACCGTGGTGCGTTTGCTTTATTTGAAAGGTATAGCGCCATCCCCGCTGCTGGTGACAGGCATCTGGCAGAGTTTCGTcc < 2:1895283/139‑1 (MQ=255) gaATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCgg > 2:2422964/1‑140 (MQ=255) gaATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCgc > 2:1119238/1‑139 (MQ=255) aaTCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTg < 2:1952154/105‑1 (MQ=255) aaTCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTg > 1:1952154/1‑105 (MQ=255) aaTCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGc < 1:363822/124‑1 (MQ=255) aaTCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTttcttcaaggc > 1:836696/1‑135 (MQ=255) aTCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGcc > 1:1602404/1‑140 (MQ=255) tCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCTCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGccc < 2:296714/140‑1 (MQ=255) tCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGccc < 2:474310/140‑1 (MQ=255) ggATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTa > 1:1384849/1‑140 (MQ=255) ggATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTa > 2:363554/1‑140 (MQ=255) gAGCTAGAGGGGCAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCaa < 2:1963712/140‑1 (MQ=255) agagGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGc > 1:1090543/1‑140 (MQ=255) agagGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGc > 1:1035051/1‑140 (MQ=255) agagGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATGTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGc > 1:1076582/1‑140 (MQ=255) agGGGGAAAGCTGGAGGGACTGTGTCTTTCGTTCGGCACACCGTGTTTCGTTTGATTTATTTGAAATGTATAGCGCCATACCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCt < 1:818662/140‑1 (MQ=255) agGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCt < 2:2419323/140‑1 (MQ=255) agGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCt > 2:1120821/1‑140 (MQ=255) agGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCt < 2:55542/140‑1 (MQ=255) agGGGGAAAGCTGGAGGGACAGAGTCTTTCGTTCGGCACACCGTGTTGCGGTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGCTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCt > 2:504248/1‑140 (MQ=255) aaGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCaaa > 2:1081530/1‑127 (MQ=255) gAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAAt > 2:1559314/1‑140 (MQ=255) gggACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCa > 1:186391/1‑92 (MQ=255) aCAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCAc > 2:1694460/1‑140 (MQ=255) aGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCt > 1:133397/1‑140 (MQ=255) aGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCt < 1:686835/140‑1 (MQ=255) aGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCt < 2:1271546/140‑1 (MQ=255) aGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCt < 1:168237/140‑1 (MQ=255) aGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCt < 2:2197267/140‑1 (MQ=255) aGTGTCTTTCGTTCGGCACACCGTGGTGCGTTTGAGTTATTTGCAATGTATAGCGCCATCCCCGCTGGGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCt < 2:1834999/140‑1 (MQ=255) tCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTcaca > 1:239296/1‑140 (MQ=255) tCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTcaca > 1:633719/1‑140 (MQ=255) tCTTGCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTcaca > 1:1169451/1‑140 (MQ=255) cTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCacac < 2:104243/140‑1 (MQ=255) cTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCacac < 2:398061/140‑1 (MQ=255) cTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTACTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCacac < 2:1980309/140‑1 (MQ=255) ttcgttcgGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAACTTTCACCTCACACCt > 2:347513/1‑140 (MQ=255) ttcgttcgGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCt > 2:917500/1‑133 (MQ=255) ttcgttcgGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCt < 1:917500/133‑1 (MQ=255) ttcgttcgGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCt > 2:424501/1‑140 (MQ=255) accccGTGTTCCCTTTGATTTAATTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCACAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCa < 1:2157238/137‑1 (MQ=255) acacCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCa < 1:1762002/140‑1 (MQ=255) acacCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCa < 1:881358/140‑1 (MQ=255) acacCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCa < 1:1251850/140‑1 (MQ=255) acacCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCGGTATCATTCa < 2:237286/140‑1 (MQ=255) gtgtTGCGTTTGATTTATTTTCAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACGTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGaaaa < 2:1383340/140‑1 (MQ=255) gtgtTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGaaaa < 1:1646604/140‑1 (MQ=255) gtgtTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGaaaa < 1:214331/140‑1 (MQ=255) gtgtTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGaaaa < 1:295447/140‑1 (MQ=255) gCGTTTGATTTATTTGAAACGTATGGCGCCATCCCTGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCATACCTCAAACAGCCTGAAGTATGGAAATTTCATCTCACACCTATATCATTCAGAAAACAAGa < 1:2326920/140‑1 (MQ=255) ggttGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGAAAACAAGACa > 2:187935/3‑140 (MQ=255) ttGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGAAAACAAGACaga < 2:1137025/140‑1 (MQ=255) ttGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGAAAACAAGACaga > 2:151929/1‑140 (MQ=255) ttGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGAAAACAAGACaga < 2:2430737/140‑1 (MQ=255) gATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGAAAACAAGACAgaga > 1:97311/1‑140 (MQ=255) gATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGAAAACAAGACAgaga > 1:737427/1‑140 (MQ=255) gATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGAAAACAAGACAgaga > 2:286997/1‑140 (MQ=255) gATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGAAAACAAGACAgaga > 2:727236/1‑140 (MQ=255) gATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGAAAACAAGACAgaga > 2:841115/1‑140 (MQ=255) gATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGAAAACAAGACAgaga > 2:2307640/1‑140 (MQ=255) atttGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATGTGGCAGAGTTTCTTCCCGGCCCTTACCTAAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGAAAACAAGACAGAGACgaga < 2:1497652/140‑1 (MQ=255) atttGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGAAAACAAGACAGAGACgaga > 1:516001/1‑140 (MQ=255) aTGTATATCCCCATCAGAGCAGCGGGTGAACGGCATCTGGGAGTGTTTCTTCCCGGCACTTACCTCACAACCCCTTAGGTTTGGAATTTTCAACTCACACCTGTATCATTCAGAAAACAAGACCGAGACGAGAAACGaat < 2:2226277/140‑2 (MQ=255) | CGCCATATTGACCTGCTGCCTATATTCCATGAATTCAGCTCGCATTATGGAGAATCAGGATATGAGCTAGAGGGGGAAAGCTGGAGGGACAGTGTCTTTCGTTCGGCACACCGTGTTGCGTTTGATTTATTTGAAATGTATAGCGCCATCCCCGCTGCGGGTGACAGGCATCTGGCAGAGTTTCTTCCCGGCCCTTACCTCAAACAGCCTGAGGTTTGGAAATTTCACCTCACACCTGTATCATTCAGAAAACAAGACAGAGACGAGAAACGAAA > NZ_CP034943/764946‑765220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |