| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 779,147 | C→T | 5.1% | I40I (ATC→ATT) | EO946_RS03975 → | glucose‑1‑phosphate cytidylyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 779,147 | 0 | C | T | 5.1% | 770.6 / 18.9 | 236 | I40I (ATC→ATT) | EO946_RS03975 | glucose‑1‑phosphate cytidylyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (123/99); new base T (6/6); total (130/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.49e-01 | |||||||||||
Only 100 of 236 total aligned reads displayed.
ATAGAGATGAGGGGTAGAGATGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGACGGCTCTACGGGAGAGGTGCAGA > NZ_CP034943/779009‑779280 | aTAGAGATGAGGGGTTGAGATGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCt < 1:1477573/140‑1 (MQ=255)aTAGAGATGAGGGGTAGAGATGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCt < 2:1549649/140‑1 (MQ=255)aTAGAGATGAGGGGTAGAGATGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCt < 2:313592/140‑1 (MQ=255)aTAGAGATGAGGGGTAGAGATGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCt < 2:2308821/140‑1 (MQ=255) cgacaTGACGGGTAGAGATGAAACCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACAGTCCGAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGACAATCTAt < 2:716471/136‑1 (MQ=255) agagATGAGGGGTAGAGATGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTAt < 1:2106587/140‑1 (MQ=255) agaTGAGTGGTAGAGATGAAAGCGGTCATTCTATGCGGCGGAAAAGGAACAATGATGAGTGAAGTCACGAATGACATTACTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCa < 1:299952/140‑1 (MQ=255) agaTGAGGGGTAGAGATGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCa < 2:1778517/140‑1 (MQ=255) gaTGAGGGGTAGAGATGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAg > 1:1577368/1‑140 (MQ=255) aTGAGGGGTAGAGATGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAga > 2:1237007/1‑139 (MQ=255) aTGAGGGGTAGAGATGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGt > 2:1872377/1‑140 (MQ=255) aTGAGGGGTAGAGATGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGt > 2:1821486/1‑140 (MQ=255) aGGGGTAGAGATGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGtact > 1:201126/1‑140 (MQ=255) ggggTAGAGATGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGtacta < 1:958301/140‑1 (MQ=255) ggggTAGAGATGAAAGCGGTCAGTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGtacta < 1:1286839/140‑1 (MQ=255) ggggGAGAGATGACAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGCTAGGCGGCAAACCGATTCGATGGCATATTATGAAAATCTATCATtacta < 2:833387/140‑1 (MQ=255) ggTAGAGATGAAAGCTGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACg < 2:1128745/140‑1 (MQ=255) ggTAGAGATGAAAGCGGTCAGTCTCTGCGGCGGAAAAGGAACACGGATGAGTGAAGTCACGACTGACATTCCTAAACCGCTCGCCATGAGAGGCGGCAAACCGATTCTATGGCATCTTATGAAAATCTATCAGTACTCCg < 2:1990783/140‑1 (MQ=255) gagaTGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATCTTATGAAAATCTATCAGTACTACGGAGt > 1:1637457/1‑140 (MQ=255) gagaTGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAATTCTATCAGTACTAGGGAGt > 1:2061004/1‑140 (MQ=255) gagaTGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGt > 2:325665/1‑140 (MQ=255) gagaTGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGt > 1:498332/1‑140 (MQ=255) gagaTGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCATAAACCGATCTCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGTAGt > 1:354676/1‑140 (MQ=255) aTGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTaaa < 2:1579833/140‑1 (MQ=255) gAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACg > 1:630060/1‑140 (MQ=255) aaaGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTAt < 1:2207408/120‑1 (MQ=255) aaaGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTAt > 2:2207408/1‑120 (MQ=255) aGCGGTCATTCTCTGCGGCGGAAAAGGAACGAGAATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATTTATCAGTACTACGGAGTAAACGAGt > 2:441129/1‑140 (MQ=255) aGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGt > 1:1917676/1‑140 (MQ=255) aGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGt > 1:52741/1‑140 (MQ=255) gTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTAt < 2:299352/114‑1 (MQ=255) gTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTAt > 1:1870199/1‑140 (MQ=255) gTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTAt > 1:424123/1‑140 (MQ=255) tGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCtttt > 1:2166919/1‑140 (MQ=255) tGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCtttt > 1:787941/1‑140 (MQ=255) tGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCtttt > 2:1095216/1‑140 (MQ=255) cggAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCt > 1:45311/1‑140 (MQ=255) aGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCaa > 1:1005889/1‑140 (MQ=255) aGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCaa > 1:1766315/1‑140 (MQ=255) aGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCaa > 2:2241488/1‑140 (MQ=255) aGTGAAGTCACGAATGACATTCCTAAACCGCGCGACAGGATAGGCGGCAAACCGATTCTCTGGCAGATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGGGTTTGGGCTATAACGGAGAAAAAAACaa > 1:2214555/1‑140 (MQ=255) aaGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGaa < 1:2268719/140‑1 (MQ=255) gTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTAt < 1:345719/75‑1 (MQ=255) gTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAGAAATCAAAGAATa > 1:2361725/1‑140 (MQ=255) gTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATa > 1:289650/1‑140 (MQ=255) gTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATa > 1:1760432/1‑140 (MQ=255) tCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTAt > 2:1401771/1‑74 (MQ=255) tCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTAt < 1:1401771/74‑1 (MQ=255) tCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATAc > 2:2222943/1‑140 (MQ=255) tCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATAc > 2:658782/1‑140 (MQ=255) cGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACttt > 1:11459/1‑140 (MQ=255) cATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACt < 1:1462835/140‑1 (MQ=255) tAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGt < 1:2244307/140‑1 (MQ=255) tAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGt < 2:1713947/140‑1 (MQ=255) aaCCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTgt > 2:351173/1‑139 (MQ=255) aaCCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTgg < 2:1287659/140‑1 (MQ=255) aaCCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTgg < 1:1974943/140‑1 (MQ=255) aaCCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTgg > 2:22129/1‑140 (MQ=255) aCCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGa < 1:259912/140‑1 (MQ=255) cTCGCCATGATAGGCGGCAAACCGATTCTCTGGCATATTAGGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACGATGAGTGGACGca > 2:2413513/1‑140 (MQ=255) cTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTaaa > 1:1062561/1‑68 (MQ=255) cTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTaaa < 2:1062561/68‑1 (MQ=255) cTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCaaa < 2:934135/111‑1 (MQ=255) cTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTCTGAGTgg > 1:892884/1‑135 (MQ=255) cTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTgg < 2:892884/135‑1 (MQ=255) cTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGACGca > 2:1483102/1‑140 (MQ=255) cTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGca > 2:1856515/1‑140 (MQ=255) cTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGca > 2:296727/1‑140 (MQ=255) cTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGca > 2:558/1‑140 (MQ=255) cTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGca > 1:556149/1‑140 (MQ=255) cTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGca > 1:12286/1‑140 (MQ=255) cTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGca > 2:635486/1‑140 (MQ=255) cTCGCCATGATAGGCGGCAAACCGATTCTATGGAATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTc > 2:81540/1‑79 (MQ=255) cGCCATGATAGGCGGCAAACCGATTCTATGCCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGACAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGcaca > 2:1022631/1‑140 (MQ=255) gcggcAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGTGTGTAAGCACAACAGCCTGaat > 2:2390757/1‑138 (MQ=255) gcggcAAACCGATGCTATGGCATATTATGAAAATCTAGCAGTACTACGGAGTAAACGTGTTTATTCTGCGTTTGGGCTCGAAAGGAGAACAAATCAAAGAATACTGTCTCGACTATGAGTGGAAGCACAACAGCGGGAct > 2:764977/1‑140 (MQ=255) ggcAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGActct > 1:2409933/1‑140 (MQ=255) aaaCCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGa < 2:200260/140‑1 (MQ=255) aaaCCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGa < 2:225968/140‑1 (MQ=255) aaCCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGAc < 1:1731705/140‑1 (MQ=255) tGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAATCACAACAGCCTGACTCTCGACGGCTCTACgtg > 1:65827/1‑138 (MQ=255) tGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGACGGCTCTACggg > 1:1123143/1‑140 (MQ=255) tGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGACGGCTCTACggg > 1:1893864/1‑140 (MQ=255) ggCATATTATGAAAATTTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAGGAATACTTTCTCGACTATGAATGGAAGCACAACAGCCTGACACTCGACAGCTCTACGGga < 1:852863/140‑1 (MQ=255) ggCATATTATGAAAATTTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAGGAATACTTTCTCGACTATGAATGGAAGCACAACAGCCTGACACTCGACAGCTCTACGGga < 1:1065860/140‑1 (MQ=255) ggCATATTATGAAAATTTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAGGAATACTTTCTCGACTATGAATGGAAGCACAACAGCCTGACACTCGACAGCTCTACGGga < 1:1966656/140‑1 (MQ=255) ggCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGACGGCTCTACGGga < 1:2382714/140‑1 (MQ=255) ggCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGACGGCTCTACGGga < 1:1990908/140‑1 (MQ=255) gCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGACGGCTCTACGGgag < 2:45311/140‑1 (MQ=255) gCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGACGGCTCTACGGgag < 2:2297928/140‑1 (MQ=255) gCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGACGGCTCTACGGgag < 2:1331376/140‑1 (MQ=255) gCATATTATGAAAAACTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATACAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGACGGCTCTACGGgag < 1:438633/140‑1 (MQ=255) tattatGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGt > 2:1134235/1‑98 (MQ=255) ttatGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGACGGCTCTACGGGAGAGGTg > 2:249160/1‑140 (MQ=255) atGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGACGGCTCTACGGGAGAGGTGCa < 1:138562/140‑1 (MQ=255) atGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGACGGCTCTACGGGAGAGGTGCa < 1:1326847/140‑1 (MQ=255) atGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGACGGCTCTACGGGAGAGGTGCa < 2:212185/140‑1 (MQ=255) atGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGACGGCTCTACGGGAGAGGTGCa < 2:1988112/140‑1 (MQ=255) atGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGACGGCTCTACGGGAGAGGTGCa < 2:1674523/140‑1 (MQ=255) tGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGACGGCTCTACGGGAGAGGTGCAg > 2:147732/1‑140 (MQ=255) | ATAGAGATGAGGGGTAGAGATGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACAAGGATGAGTGAAGTCACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTCTATGGCATATTATGAAAATCTATCAGTACTACGGAGTAAACGAGTTTATTCTGCTTTTGGGCTATAAAGGAGAAAAAATCAAAGAATACTTTCTCGACTATGAGTGGAAGCACAACAGCCTGACTCTCGACGGCTCTACGGGAGAGGTGCAGA > NZ_CP034943/779009‑779280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |