| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 892,051 | G→A | 5.8% | T234T (ACG→ACA) | EO946_RS04510 → | iron ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 892,051 | 0 | G | A | 5.8% | 554.7 / 15.4 | 173 | T234T (ACG→ACA) | EO946_RS04510 | iron ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base G (102/60); new base A (5/5); total (108/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01 | |||||||||||
Only 100 of 179 total aligned reads displayed.
TGCAGGGCAGGAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGG > NZ_CP034943/891912‑892189 | tgCAGGGCAGGAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACg > 1:627001/1‑140 (MQ=255) ggcaggAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCct > 1:1745766/1‑140 (MQ=255) ggcaggAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCct > 1:1734258/1‑140 (MQ=255) ggcaggAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCct > 1:2388540/1‑140 (MQ=255) ggcaggAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCct > 1:1199274/1‑140 (MQ=255) ggcaggAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCct > 2:125785/1‑140 (MQ=255) ggcaggAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCct > 1:704488/1‑140 (MQ=255) aggAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCctgct > 2:1345960/1‑140 (MQ=255) gAGTCTGGATCTGTTGATGACGATGTTTCCATATGCAGCGGCAGCGCTGGTAATCTGCTTCTTTCTCGGCCAAAAAATTAATCTCCTCGTTCTGGGAGAAGATGTGGCAAAAGGACTCGGCCAAAAAACAGGCCTGCTGa > 2:1737212/1‑140 (MQ=255) gAGTCTGGATCTGTTGATGACGATGTTTCCATATGCAGCGGCAGCGCTGGTAATCTGCTTCTTTCTCGGCCAAAAAATTAATCTCCTCGTTATGGGAGAAGATGTGGCAAAAGGACTCGGCCAAAAAACAGGCCTGCTGa > 2:1641286/1‑140 (MQ=255) gAGTCTGGATCTGTTGATGACGATGTTTCCATATGCAGCGGCAGCGCTGGTAATCTGCTTCTTTCTCGGCCAAAAAATTAATCTCCTCGTTATGGGAGAAGATGTGGCAAAAGGACTCGGCCAAAAAACAGGCCTGCTGa > 2:1644489/1‑140 (MQ=255) gAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTCTGATCAGCTTCTTTCTTGGCCAAAATATCAATCTCCTCGTCATGGGAGAAGATGTGGCCAAAGGACTTGGCCAAAAAACGGGCCTGCTGa > 2:873512/1‑140 (MQ=255) gAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGa > 2:1978645/1‑140 (MQ=255) gAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGa > 1:543932/1‑140 (MQ=255) gAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGa > 1:1031297/1‑140 (MQ=255) gAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGa > 1:2274673/1‑140 (MQ=255) gAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGa > 1:2259250/1‑140 (MQ=255) gAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGa > 2:721761/1‑140 (MQ=255) gAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGa > 1:116849/1‑140 (MQ=255) gAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGa > 2:843363/1‑140 (MQ=255) gAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGa > 1:1331458/1‑140 (MQ=255) gAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGa > 1:1458067/1‑140 (MQ=255) tCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAAt > 1:2090126/1‑140 (MQ=255) tCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAAt > 1:49997/1‑140 (MQ=255) tGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAAttt > 2:674940/1‑140 (MQ=255) tGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAAttt > 2:1228531/1‑140 (MQ=255) gATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTtgt > 1:2021806/1‑140 (MQ=255) tgctgATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATg > 2:483582/1‑140 (MQ=255) gctgATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATgg > 2:672060/1‑140 (MQ=255) gctgATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATgg > 2:824042/1‑140 (MQ=255) ctgATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGACATTTGTGATGGc > 2:2427729/1‑140 (MQ=255) ctgATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGc > 1:218125/1‑140 (MQ=255) ctgATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGc > 1:1958823/1‑140 (MQ=255) ctgATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGc > 2:2338616/1‑140 (MQ=255) ctgATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGc > 1:2308896/1‑140 (MQ=255) tgatgaCAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCa < 2:1336652/140‑1 (MQ=255) aaTGCTCCCCTATGCAGCCTCAGCGCTTATGATGAGCTTCTTTCTTGGCCAACAAATCTATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTTCTGAAATTTGTGATGGCACTTTGCg < 2:2197893/140‑1 (MQ=255) aaTGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCg < 2:1788607/140‑1 (MQ=255) aaTGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCg < 2:831189/140‑1 (MQ=255) aaTGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCg < 2:218125/140‑1 (MQ=255) tGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCgtt > 1:216349/1‑140 (MQ=255) tCCCATATGCATCCGCAGCGCTTATGATCAGCTTCTTTATTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACTGGCCTGCTGAAATTTGTGATGGCCCTTTGCgttgtg > 1:2115533/1‑139 (MQ=255) cATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTg < 1:1267964/140‑1 (MQ=255) cATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTg < 1:979821/140‑1 (MQ=255) atatGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGc > 2:1717850/1‑140 (MQ=255) atGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTa < 1:672060/140‑1 (MQ=255) gCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGc < 1:674940/140‑1 (MQ=255) gCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGc < 1:2048238/140‑1 (MQ=255) cAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGcc > 1:1460045/1‑140 (MQ=255) cAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGcc > 1:271005/1‑140 (MQ=255) cAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGcc > 1:2150481/1‑140 (MQ=255) aGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCg > 1:310808/1‑140 (MQ=255) aGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCg > 1:301337/1‑140 (MQ=255) ccGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAATATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCggg > 2:345865/1‑140 (MQ=255) ccGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAGATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCggg > 1:1749356/1‑140 (MQ=255) ccGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTTATGGCACTTTGCGTTGTTTTGCTAGCCggt > 2:1425742/1‑139 (MQ=255) ccGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGGTGTTTTGCTAGCCggg > 2:239759/1‑140 (MQ=255) ccGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACGTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCAGTTTGCGTTGTTTTGCTAGACggg > 1:1843853/1‑140 (MQ=255) ccGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATAAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCggg > 1:150169/1‑140 (MQ=255) cAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTct > 2:1066537/1‑140 (MQ=255) aGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTctg < 1:1066537/140‑1 (MQ=255) tATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCg > 1:1033209/1‑140 (MQ=255) aTGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGc > 1:911363/1‑140 (MQ=255) cAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTg > 2:1451105/1‑140 (MQ=255) cAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTg > 2:454143/1‑140 (MQ=255) cttcttTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCg > 2:130440/1‑140 (MQ=255) cttcttTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGCCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATAGCCg > 2:73043/1‑140 (MQ=255) ggCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTc > 1:237055/1‑140 (MQ=255) aaaaaTCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTa < 1:978703/140‑1 (MQ=255) aaaaaTCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTa < 2:2150481/140‑1 (MQ=255) aaaTCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTAtt < 2:213261/140‑1 (MQ=255) cctcGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGGCGGGCCGATTTCATTTATTGGCATCatta > 2:2114983/1‑140 (MQ=255) ctcGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCattat > 1:1287227/1‑140 (MQ=255) ggAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGc < 1:227940/106‑1 (MQ=255) ggAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCAttt < 2:2095721/140‑1 (MQ=255) ggAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCAttt < 2:2350393/140‑1 (MQ=255) ggAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCAttt < 2:1956343/140‑1 (MQ=255) ggAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCAttt < 2:1941209/140‑1 (MQ=255) ggAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCAttt < 2:2244146/140‑1 (MQ=255) gaagaTGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGc < 2:1711834/140‑1 (MQ=255) gaagaTGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGc < 2:111908/140‑1 (MQ=255) aagaTGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGcc < 2:1631804/140‑1 (MQ=255) cAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTAtc < 2:301337/140‑1 (MQ=255) cAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTAtc < 2:310808/140‑1 (MQ=255) aaaaGGACTCGGCCAAAAAACAGGCCTGCTGAAATTTGTGATGGCGCTTTGTGTTGTCATGCTTGCAGGGTCCGCTGTCGCCATTGCCGGGCCGATTTCTTTTATCGGCATCATTATTCCGCATTTTGCCCGCTTTGtcg < 1:1641286/140‑1 (MQ=255) aaaaGGACTCGGCCAAAAAACAGGCCTGCTGAAATTTGTGATGGCGCTTTGTGTTGTCATGCTTGCAGGGTCCGCTGTCGCCATTGCCGGGCCGATTTCTTTTATCGGCATCATTATTCCGCATTTTGCCCGCTTTGtcg < 1:2035512/140‑1 (MQ=255) aaGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTAtcgtc > 2:615698/1‑140 (MQ=255) aGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCTTTATTCCGCATTTTGCCCGATTTAtcgtcg > 1:349448/1‑140 (MQ=255) gACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGc < 2:2090126/140‑1 (MQ=255) aCTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCa < 1:1098250/140‑1 (MQ=255) ggCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGa < 2:911363/140‑1 (MQ=255) ggCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGa < 2:655307/140‑1 (MQ=255) aacaCGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTAGTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCg < 1:284182/137‑1 (MQ=255) aaaaCGGGCCTGCTGACATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCg > 1:743826/1‑140 (MQ=255) aaaaCGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCg > 1:2193740/1‑140 (MQ=255) aaaaCGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCg > 1:993154/1‑140 (MQ=255) aaCGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGtt < 2:1796835/140‑1 (MQ=255) aaCGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGtt < 2:150169/140‑1 (MQ=255) aaCGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGtt < 2:20654/140‑1 (MQ=255) cGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGAGTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTgg > 1:794974/1‑140 (MQ=255) | TGCAGGGCAGGAGTCTGGATCTGCTGATGACAATGCTCCCATATGCAGCCGCAGCGCTTATGATCAGCTTCTTTCTTGGCCAAAAAATCAATCTCCTCGTCATGGGAGAAGATGTGGCAAAAGGACTTGGCCAAAAAACGGGCCTGCTGAAATTTGTGATGGCACTTTGCGTTGTTTTGCTAGCCGGGTCTGCTGTCGCAATTGCCGGGCCGATTTCATTTATTGGCATCATTATTCCGCATTTTGCCCGATTTATCGTCGGCAATGATTATCGTTGG > NZ_CP034943/891912‑892189 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |