| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,013,969 | C→A | 5.4% | D70Y (GAT→TAT) | EO946_RS05230 ← | polysaccharide deacetylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,013,969 | 0 | C | A | 5.4% | 467.1 / 10.3 | 147 | D70Y (GAT→TAT) | EO946_RS05230 | polysaccharide deacetylase |
| Reads supporting (aligned to +/- strand): ref base C (67/72); new base A (4/4); total (71/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 147 total aligned reads displayed.
GTCGCTTTTACATCAGCGCTTTTCAGTACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAAGCAGCACACATA > NZ_CP034943/1013836‑1014103 | tCGCTTTTACATCAGCGCTTTTCAGTACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAg < 1:1697198/140‑1 (MQ=255) aCATCAGCGCTTTTCAGTACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGttttt < 2:1816847/140‑1 (MQ=255) gcgcTTTTCAGTACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGt > 2:2047103/1‑127 (MQ=255) gcgcTTTTCAGTACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCtt < 1:1079896/140‑1 (MQ=255) gcgcTTTTCAGTACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCtt > 1:2024304/1‑140 (MQ=255) gcgcTTTTCAGTACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTAAGCtt > 1:148765/1‑140 (MQ=255) gcgcTTTTCAGTACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGAGGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAgggt > 1:2170841/1‑137 (MQ=255) gcgcTTTTCAGGACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGGCTTATCTCCCATGTTCTGCTTTGTCTGCGGTTGTTTTATCAGCAGATCGGGGGAGTGGTTTTTCTGCtt > 1:2412695/1‑140 (MQ=255) cgcTTTTCAGTACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTc < 1:1059233/140‑1 (MQ=255) cgcTTTTCAGTACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTc < 1:1566149/140‑1 (MQ=255) cgcTTTTCAGTACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTc < 1:1566148/140‑1 (MQ=255) gcTTTTCAGTACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGCTGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCa < 1:1206831/140‑1 (MQ=255) gcTTTTCAGTACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCa < 1:775796/140‑1 (MQ=255) cTTTTCAGTACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAg > 2:1088023/1‑140 (MQ=255) ttttCAGTACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAgg < 1:928495/140‑1 (MQ=255) tACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTAAGCTTCAGGCTTTCCt > 1:1520487/1‑140 (MQ=255) gTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTtct < 1:591517/140‑1 (MQ=255) gTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTtct < 1:2188556/140‑1 (MQ=255) gTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTtct < 1:1159742/140‑1 (MQ=255) gTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTtct < 1:1924288/140‑1 (MQ=255) cGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTCAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCATCTTCAGGCTTTCCttataa > 1:281955/1‑136 (MQ=255) cGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTGTCa > 1:619391/1‑140 (MQ=255) cGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCa > 2:738260/1‑140 (MQ=255) cGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGATTCAGGCTTTCCTTCTCa > 2:1769116/1‑140 (MQ=255) cGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATAGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCa > 2:807911/1‑140 (MQ=255) cGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATAGGGGGAGTCGTTTTTAAGCTTCAGGCTTTACTTCTCa > 2:1441114/1‑140 (MQ=255) cGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCGGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTGTTTCAGCTTAAGGCTTTGCTTcaca > 2:379769/1‑140 (MQ=255) tGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCGTCTCATTGCGAAGCTGGc > 1:1347160/1‑140 (MQ=255) taGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGtt < 1:2380342/140‑1 (MQ=255) taGGCTCCCGGGCCATAATCGAAGGTTAAGTAAACCGTCTGATCTCCCATGTTCAGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGtt < 2:2290457/140‑1 (MQ=255) ggCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTAAGGCTTTACTTCTAATTGCGAAGCTGGCCGgttt > 1:515720/1‑139 (MQ=255) gCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTACTTCTCATTGCGAAGCTGGCCGGTtgt > 1:720158/1‑140 (MQ=255) aCGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCGTCATGCTTTCCGTCTCATTGCGAACCTGGCCGGTTgtggtg > 1:2023549/1‑140 (MQ=255) cGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTGCTTCTCATTGCGAAGCTGGCCGTGTGtggggg > 1:1357430/1‑140 (MQ=255) cGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGtggtgg > 2:863823/1‑140 (MQ=255) cGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCAATGCGAAGCTGGCCGTTTGtggtgg > 1:1164092/1‑140 (MQ=255) cGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTGTTTCGGCTTCAGGCTTTCCTTCTCATTGCGAAGCGGGCCGTTTGtggggg > 1:1569513/1‑140 (MQ=255) cGGGCCATCATCGAAGGTTAAGTAAACCGTCGTCGCTCCCATGTTCTGCGTTGTCTGCAGATGGTTTATCAGCAGAGCGGGGGAGTCGTTTGTCAGCTTCAGGCTTTCCGGCTCATTGCGAAGCTGGCCGTTTGtggtgg > 2:1169811/1‑140 (MQ=255) catcatCGAAGGTTAAGTCAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTGTTTCTGCGTGAGGGGTTGCTTCTCATTGCGACGCTGGCCGTGTGGGGGGGCCGTg > 2:2217545/1‑140 (MQ=255) catcatCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTg < 2:257850/140‑1 (MQ=255) catcatCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCAGTGCGAAGCTGGCCGTTTGTGGTGGCAGTg < 2:429882/140‑1 (MQ=255) aaCCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATg < 1:2106712/140‑1 (MQ=255) cGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGc < 2:826612/140‑1 (MQ=255) cGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGc < 2:1984708/140‑1 (MQ=255) cGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGc < 2:1627430/140‑1 (MQ=255) tCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATg < 1:471478/135‑1 (MQ=255) tCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATg > 2:471478/1‑135 (MQ=255) cTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTGAGCTTCAGGCTTTCCTTGTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGGGACGTCCTTTGGTTTCGATGAGCTGt > 1:808369/1‑140 (MQ=255) cTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTAAGCTTCAGGCGTTCCGTCTCATTGGGAAGCTGGCCGTTTGTGGGGGCAGTGGCGTGCTTTTGTTTCGAGGAGCTGt > 1:808411/1‑140 (MQ=255) ttATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCGCATTGCGAAGCTGGCCGTTTGTGGTGGCCGTGACTTCCTTTGCTTTCGATGAGCTGtt > 2:1052479/1‑140 (MQ=255) ttATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCATAGCATTGGGCACCTGGCCGTTTGTGGTGGCCGTGACTTCCTTTGCTTTAGATTAggggtt > 2:158536/1‑135 (MQ=255) ttATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTACTTCTCATTTCGAAGCTGGCCGTTTTTGGTGGCAGTGACTTCCTTTGCTTTAGATTAGCTGtt > 2:2199789/1‑140 (MQ=255) tctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGa < 1:357144/140‑1 (MQ=255) tctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGa < 1:1993991/140‑1 (MQ=255) tctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATAGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGa < 1:1441114/140‑1 (MQ=255) tctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATAGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGa < 1:2224186/140‑1 (MQ=255) tcgccccTGTTCTGCTTTGTCGGCAGATGTTGTCTCAGCAGATAGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGa < 1:1243493/137‑1 (MQ=255) ctcCCATGTTCTGCTTTGTCTGCAGATGTTTTCTCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGaa < 1:2084934/140‑1 (MQ=255) ctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGaa < 2:1803065/140‑1 (MQ=255) ctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGaa < 2:1965084/140‑1 (MQ=255) ctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGaa < 1:1636011/140‑1 (MQ=255) ctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGaa < 2:2221919/140‑1 (MQ=255) ctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGaa < 2:2429071/140‑1 (MQ=255) ctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGaa < 2:1366120/140‑1 (MQ=255) ctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGaa < 1:1980534/140‑1 (MQ=255) ctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGaa < 1:398472/140‑1 (MQ=255) ctcCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGaa < 1:689723/140‑1 (MQ=255) cATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGtt > 2:1209112/1‑93 (MQ=255) cATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGtt < 1:1971351/93‑1 (MQ=255) cATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGtt > 2:1971351/1‑93 (MQ=255) cATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCACGCTTTCCATCTAATTGCGAAACTGGCCGTTTGTGGTGGCATTGACATCAATTTCATTAGATGAGCTGTTTTAATAcc > 1:1280945/1‑140 (MQ=255) aTGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATAccc < 2:1701738/140‑1 (MQ=255) tgttgtGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGGTTGAGGCTTTCCGTCTCATTCCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTTGTTTCGGTGAGCTGGTGGAAAACCCt > 2:442159/1‑140 (MQ=255) tGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTGCACATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGACCTGTTTGACTACCCt > 2:651824/1‑140 (MQ=255) cTGGTTTGTCTGCAGATGTTGTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGaa < 2:1460013/140‑1 (MQ=255) tGCTTTGTCTGCAGATTTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGGCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAAt < 1:624285/140‑1 (MQ=255) tGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTGAGCTTCAGGCTTTCCTTCTCATTGCGAAGCAGGCCGTTTGTGGTGGGAGTGACTTACTTTTCTGTCGTTGTGCTGTTTTAATAaccaaagag > 1:244912/1‑134 (MQ=255) tGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAAt < 1:1759032/140‑1 (MQ=255) tGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCGTAAGGCTTTCCTTCTCATTTCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTTCTTTCGATGAGCTGTTGGAATAACCTAGAAt > 1:1046409/1‑140 (MQ=255) tGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCa < 1:1594637/140‑1 (MQ=255) tGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCa < 1:852430/140‑1 (MQ=255) tGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCa < 1:1584535/140‑1 (MQ=255) tGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCGTTCCTTCTCATTTGGAAGCTGGCCGTTTTTTGTGGCAGTGACATCCTTTGGTTTCGCTGAGCGGTTTGCATAACCGAGAATCCCCa > 1:939085/1‑140 (MQ=255) tCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTATCATTGCGAAGCTGGCCGTTTTTGGTGGCAGTGACTTACTTTGCTTTAGATGATCTGTTTGGATACCCACGAAACACCaaa > 1:442011/1‑138 (MQ=255) tCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTACTTCTCATTTCGAAGCAGGCCGTTTGTGGTGGCAGTGACATCCTTTTCGTTAGATGAGCTGTTTGAATACACGAGAAACACCaaa > 1:854267/1‑138 (MQ=255) tCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTACTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTACATTTCTTTGGATTAGCTGTTTTAATAACCAATAATAACCaaa > 1:1935605/1‑138 (MQ=255) tCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTACTTATCAATTCGAAGCTGGCCGGTTTTGGTGGCCGTTACAGACTTTTCTTTAGATGAGCTGTTTGAAAAACCTATAATCAcccaa > 1:442010/1‑137 (MQ=255) tCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCGTCAGGCTTTCCTTCTCATTGCGACGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGGTTTCGCTGAGCTGTTTGAATACCCGAGAATAACCATa > 1:2276492/1‑140 (MQ=255) tGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGGGAAGCTGGCCGGTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTTGTCTACCCTATAATCAACATaaa > 2:1302572/1‑139 (MQ=255) gCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGc < 2:163744/140‑1 (MQ=255) ccAGACGTTTTACCAGCAGATCGGGGGAGTCGAGTTTCACCCTCAGCCTGCCCTACACATCGCGACCCGCCCCCTCTGCGCTGGCACTCACTTCCCCTGCCACCGATCACCTCATGGACTACCCTACAATCACCATaacc < 2:13755/139‑3 (MQ=255) aGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCGTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTAGATGAGCTGTTGGAATACCCTAGAATCACCAAAAGCaa > 2:1660950/1‑140 (MQ=255) ttttATCAGCAGATCGGGGGAGTCGTTTTTACGCTTGAGGCTTTCCTTCTCATTGCGAAGCTGGGCGGTTGTGGTGGCAGTGTATTCCATTGGTTTGGATGATCTGTTGTGATACCCAACAATCAACAAAAGCAAAaaca > 1:749314/1‑140 (MQ=255) ttATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAagcagc < 1:344301/140‑1 (MQ=255) ttATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAagcagc < 1:1438911/140‑1 (MQ=255) ttATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAagcagc < 2:856551/140‑1 (MQ=255) tATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAAgcagca < 1:348584/140‑1 (MQ=255) cagATCGGGGGAGTCGTTTTTGACCTTCAGGCTTTACTTCTAAATGCGAAGCATGCCGTTTTTTGTTGCAATGACATCCTTTTCTTTAGATGATGTGTTTGGATAACCTAGTATCACCAAAAAAAAAAGCACCACAAATa > 1:2270058/1‑140 (MQ=255) cagATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCCGTGACTTCCTTTGCTTTCGATTAGCTGTTGGTATACACTATAATCACCATAAGCAAAAGCAGCACACATa > 2:2300952/1‑140 (MQ=255) cagATCGGGGGAGTCGTTTTTCAGCGTCAGGCTTTGCGTGTCATTTCGAAGCTGGCCCTTTGTGGTGGCAGTGACATGCTTTTCGTTCGATGAGATGTTGGAATAAACGAGAATAACCAAAAGCAAAAGCAGcacacaaa > 1:1191241/1‑138 (MQ=255) | GTCGCTTTTACATCAGCGCTTTTCAGTACGTCGAGCAAGCGGTTTGTATAGGCTGACGGGCCATCATCGAAGGTTAAGTAAACCGTCTTATCTCCCATGTTCTGCTTTGTCTGCAGATGTTTTATCAGCAGATCGGGGGAGTCGTTTTTCAGCTTCAGGCTTTCCTTCTCATTGCGAAGCTGGCCGTTTGTGGTGGCAGTGACTTCCTTTGCTTTCGATGAGCTGTTGGAATACCCTAGAATCACCATAAGCAAAAGCAGCACACATA > NZ_CP034943/1013836‑1014103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |