| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,342,854 | T→C | 5.0% | N67N (AAT→AAC) | hmpA → | NO‑inducible flavohemoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,342,854 | 0 | T | C | 5.0% | 385.7 / 6.6 | 120 | N67N (AAT→AAC) | hmpA | NO‑inducible flavohemoprotein |
| Reads supporting (aligned to +/- strand): ref base T (32/80); new base C (3/3); total (35/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 129 total aligned reads displayed.
AGAAACCATCACTGGCCGTTTTTACGATCTGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCATTAAAGATGTATTGGGAGATGCTG > NZ_CP034943/1342716‑1342993 | agaAACCATCACTGGCCGTTTTTACGATCTGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAata > 2:1356419/1‑140 (MQ=255)agaAACCATCACTGGCCGTTTTTACGATCTGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAata > 2:1356394/1‑140 (MQ=255) aCCATCACTGGCCGTTTTTACGCTCTGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGa > 1:793259/1‑140 (MQ=255) aCCATCACTGGCCGTTTTTACGATCTGATTTTTCAATACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGACGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTCTTGCAGCTGCGGCAAATATAGa > 1:1525956/1‑140 (MQ=255) aCCATCACTGGCCGTTTTTACGATCTGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGa > 1:1091993/1‑140 (MQ=255) aCCATCACTGGCCGTTTTTACGATCTGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGa > 1:1667680/1‑140 (MQ=255) aCCATCACTGGCCGTTTTTAAGATCTGATGTTTCAAGAACATCCATAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAAtatata > 1:464554/1‑138 (MQ=255) aCCATCACCGGCCGTTTTTACGATCTGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCGTGCAAATGCCCGTATTGCAGCTGCGGCAAATATAGa > 1:1490846/1‑140 (MQ=255) ccATCACTGGCCGTTTTTACGATCTGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGAc > 1:1327577/1‑140 (MQ=255) ccATCACTGGCCGTTTTTACGATCTGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGAc > 1:683466/1‑140 (MQ=255) tCACTGGCCGTTTTTACGATCTGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAg > 2:1510994/1‑140 (MQ=255) aCTGGCCGTTTTTACGATCTGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCt < 2:89852/140‑1 (MQ=255) aCTGGCCGTTTTTACGATCTGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCt < 2:1032067/140‑1 (MQ=255) aCTGGCCGTTTTTACGATCTGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCGGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCt < 2:203535/140‑1 (MQ=255) ggCCGTTTTTACGATCTGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCgg < 2:1877889/140‑1 (MQ=255) gCCGTTTTTACGATCGGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAAAAAACACAGCGAACTGCACTGGCAAATGCCGTTATTGCAGCTGCGGCAAACATTGACCaattagga > 2:1601035/1‑133 (MQ=255) ccGTTTTTACGATCTGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAATAAAACTCAGCGCGCTGCCCTTGCAAATGCCGGTATTGCAGCTGCGGCAAATATAGACCAGCTCGGac > 1:750879/1‑139 (MQ=255) tCTGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCGGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCgg < 2:2336308/140‑1 (MQ=255) gTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCa < 2:583073/140‑1 (MQ=255) gTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCa < 2:413826/140‑1 (MQ=255) gTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCa < 2:2132802/140‑1 (MQ=255) gTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCa < 2:1854993/140‑1 (MQ=255) cAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACACAGCGCGCTGCCCTTGCAAAAGCCGTTATTGCAGCTGCGGCAAATATAGACCCGCACGGACCTATCAGTCCGGTCGTCAAAcc > 2:2392758/1‑139 (MQ=255) aGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGa > 2:46509/1‑140 (MQ=255) gACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGac < 1:889652/140‑2 (MQ=255) gACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGAt < 2:1685266/140‑1 (MQ=255) gACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGAt < 1:685385/140‑1 (MQ=255) gACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGAt < 1:1356419/140‑1 (MQ=255) gACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGAt < 2:1492962/140‑1 (MQ=255) gACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGAt < 1:2395767/140‑1 (MQ=255) gACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGAt < 1:667000/140‑1 (MQ=255) gACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGAt < 1:439385/140‑1 (MQ=255) gACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGAt < 1:4596/140‑1 (MQ=255) gACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGAt < 2:1002093/140‑1 (MQ=255) gACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAAATATCATTGCGGTCGTCAAACAGAt < 1:2331309/140‑1 (MQ=255) gACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCGGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGAt < 1:1342316/140‑1 (MQ=255) aTCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGc > 2:867/1‑140 (MQ=255) cAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCAt < 1:1146748/140‑1 (MQ=255) agCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAg < 2:1327577/140‑1 (MQ=255) agCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAg < 2:683466/140‑1 (MQ=255) cTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCa > 1:157620/1‑140 (MQ=255) ttttGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCAc > 2:324242/1‑140 (MQ=255) tttGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCAcc > 2:1740033/1‑140 (MQ=255) ttGAACATTTTTAATCAAACAAACCAACAGAAGAACACTCAGCGCGCGGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGACCTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCg < 2:330512/140‑1 (MQ=255) ttGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCg > 1:1511131/1‑140 (MQ=255) ttGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCg > 2:289662/1‑140 (MQ=255) ttGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCg > 1:967472/1‑140 (MQ=255) ttGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCg < 2:1736133/140‑1 (MQ=255) ttGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCg < 2:603422/140‑1 (MQ=255) ttGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCGTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCg < 2:2093828/140‑1 (MQ=255) tttttAATCAAACACACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATc < 1:1456686/140‑1 (MQ=255) tttttAATCAAACAAACCAAAAGAAGAAACCTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATc < 1:1017167/140‑1 (MQ=255) tttttAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACCGATCGGCCATAAGCACCGCAGTATc < 1:1437169/140‑1 (MQ=255) tttttAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATc < 1:24557/140‑1 (MQ=255) tttttAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATc < 1:2054974/140‑1 (MQ=255) tttttAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATc < 1:2065391/140‑1 (MQ=255) tttttAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATc < 1:649582/140‑1 (MQ=255) tttttAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATc < 1:2244829/140‑1 (MQ=255) tttttAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATc < 2:157620/140‑1 (MQ=255) tttttAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATc < 1:2366224/140‑1 (MQ=255) tttttAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCGGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATc < 1:1902135/140‑1 (MQ=255) ttAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCAGAAGCACCGCAGTATCGGa > 2:584863/1‑140 (MQ=255) aTCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAAtt < 1:1997349/140‑1 (MQ=255) aTCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAAGGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAAtt < 2:1248972/140‑1 (MQ=255) acaaacCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGc > 1:1902837/1‑140 (MQ=255) caaacCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCt < 2:1091993/140‑1 (MQ=255) caaacCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCt < 2:793259/140‑1 (MQ=255) caaacCAAAAGAAGAAAACTCAGCGCGCGGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCt < 2:1667680/140‑1 (MQ=255) acCAAAAGAAGAAAACTCAGCGCGCTGCCCGTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGaa < 1:1580104/140‑1 (MQ=255) acCAAAAGAAAAAAACACAGCGAACTGCACTGGCAAATGCCGTTATTGCAGCTGCGGCAAACATTGACCAATTAGGAAACATCATTCCGGTTGTCAAACAAATCGGCCACAAGCACCGCAGTATCGGAATTAAGCCTGag < 1:1601035/140‑2 (MQ=255) acCAAAAGAAAAAAACACAGCGAACTGCACTGGCAAATGCCGTTATTGCAGCTGCGGCAAACATTGACCAATTAGGAAACATCATTCCGGTTGTCAAACAAATCGGCCACAAGCACCGCAGTATCGGAATTAAGCCTGag < 1:1824331/140‑2 (MQ=255) acCAAAAGAAAAAAACACAGCGAACTGCACTGGCAAATGCCGTTATTGCAGCTGCGGCAAACATTGACCAATTAGGAAACATCATTCCGGTTGTCAAACAAATCGGCCACAAGCACCGCAGTATCGGAATTAAGCCTGag < 1:593025/140‑2 (MQ=255) agaagaAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTAc > 1:2288815/1‑140 (MQ=255) cgcgcTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGaa > 2:2244226/1‑140 (MQ=255) tGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATAtt > 2:642576/1‑140 (MQ=255) gCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGAt < 1:76787/140‑1 (MQ=255) gCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGAt < 1:752433/140‑1 (MQ=255) gCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGAt < 1:139774/140‑1 (MQ=255) gCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGAt < 1:2087338/140‑1 (MQ=255) aaaTGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTg < 2:1687310/140‑1 (MQ=255) aaaTGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTg < 2:1041745/140‑1 (MQ=255) aaTGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGc < 2:1834090/140‑1 (MQ=255) aaTGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGc < 2:1825158/140‑1 (MQ=255) tGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCa > 2:2132740/1‑140 (MQ=255) gCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCAt < 1:1281447/140‑1 (MQ=255) gCCGTTATTGCAGCTGAGGCAAATATAGACCACCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCTCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCAt < 1:1212977/140‑1 (MQ=255) cGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCATTa < 2:577021/140‑1 (MQ=255) ttATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCATTaaa < 2:796572/140‑1 (MQ=255) tATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCATTAAAg < 2:1511131/140‑1 (MQ=255) ttGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCATTAAAGAt < 2:1771000/140‑1 (MQ=255) cAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCATTAAAGATGTa < 2:625375/140‑1 (MQ=255) cAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCATTAAAGATGTa < 2:1969176/140‑1 (MQ=255) cAGCTGCGGCAAAGATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCATTAAAGATGTa < 2:624977/140‑1 (MQ=255) gCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCATTAAAGATGTAtt > 1:2250544/1‑140 (MQ=255) ggCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCATTAAAGATGTATTGGgag < 2:878065/140‑1 (MQ=255) ggCAAAGATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAAGATGACCCGATCGTTGGGAAATATTTGCTGATTGCCATTAAAGATGTATTGGgag < 2:1570673/140‑1 (MQ=255) tataGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCATTAAAGATGTATTGGGAGAtgctg < 2:144713/140‑1 (MQ=255) tataGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCATTAAAGATGTATTGGGAGAtgctg < 2:1256801/140‑1 (MQ=255) tataGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCATTAAAGATGTATTGGGAGAtgctg < 2:2188761/140‑1 (MQ=255) tataGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCATTAAAGAGGTATTGGGAGAtgctg < 2:1610684/140‑1 (MQ=255) | AGAAACCATCACTGGCCGTTTTTACGATCTGATGTTTCAAGACCATCCAGAGCTTTTGAACATTTTTAATCAAACAAACCAAAAGAAGAAAACTCAGCGCGCTGCCCTTGCAAATGCCGTTATTGCAGCTGCGGCAAATATAGACCAGCTCGGAACTATCATTCCGGTCGTCAAACAGATCGGCCATAAGCACCGCAGTATCGGAATTAAGGCTGAACATTACCCGATCGTTGGGAAATATTTGCTGATTGCCATTAAAGATGTATTGGGAGATGCTG > NZ_CP034943/1342716‑1342993 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |