| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,365,757 | G→A | 5.0% | S85S (TCG→TCA) | EO946_RS07135 → | PepSY domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,365,757 | 0 | G | A | 5.0% | 323.7 / 3.6 | 99 | S85S (TCG→TCA) | EO946_RS07135 | PepSY domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (32/61); new base A (3/2); total (36/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.45e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTAGAAGCCTCTTATGAAGGAAAGGTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGTTGCCACATATACCATTCAA > NZ_CP034943/1365623‑1365889 | gTAGAAGCCTCTTATGAAGGAAAGGTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGaa < 2:1354650/140‑1 (MQ=255)gTAGAAGCCTCTTATGAAGGAAAGGTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGaa < 2:1549287/140‑1 (MQ=255)gTAGAAGCCTCTTATGAAGGAAAGGTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGaa < 1:1195447/140‑1 (MQ=255)gTAGAAGCCTCTTATGAAGGAAAGGTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGaa < 2:2017788/140‑1 (MQ=255)gTAGAAGCCTCTTATGAAGGAAAGGTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGaa < 2:793047/140‑1 (MQ=255)gTAGAAGCCTCTTATGAAGGAAAGGTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGaa < 1:2214708/140‑1 (MQ=255)gTAGAAGCCTCTTATGAAGGAAAGGTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGaa < 1:1634324/140‑1 (MQ=255) aGAAGCCTCTTATGAAGGAAAGGTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACa < 2:325104/140‑1 (MQ=255) ggAAAGGTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGaa > 1:2428146/1‑140 (MQ=255) ggAAAGGTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGaa > 1:266964/1‑140 (MQ=255) aaGGTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATcc > 2:841445/1‑140 (MQ=255) aaGGTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATcc > 1:870942/1‑140 (MQ=255) aGGTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTCAAAGCGATGAATCCa < 1:2072588/140‑1 (MQ=255) aGGTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCa < 1:2072550/140‑1 (MQ=255) aGGTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCa < 1:797976/140‑1 (MQ=255) gTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCACACTCAGCTAACATTCTTTCGATGAACAGAGTCAAAGCGAGGAATCCATc > 2:1871338/1‑140 (MQ=255) gTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATc < 1:2124567/140‑1 (MQ=255) gTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATc < 1:606169/140‑1 (MQ=255) gTCACGAAACTAACACAGTCAAAGTATAAAAAAACATATGACATGACCCTTGAAAATCCAACGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATc < 1:1952488/140‑1 (MQ=255) gAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCa > 1:924237/1‑140 (MQ=255) gAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCa > 1:924249/1‑140 (MQ=255) gAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCa > 1:1976355/1‑140 (MQ=255) aaaGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCAt < 2:292756/140‑1 (MQ=255) aaaGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCAt < 2:2368823/140‑1 (MQ=255) aaaGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCAt < 2:2332934/140‑1 (MQ=255) gcaaCACAATCAAAGGATAAAAAAACATATGATATAACCCTTGAAAATCCAAAGGGAACTTACTTTGTAAAAGCAGACGCAATATCGGCTGACATTCTTTCAATGAATAGAGTAAAAGCGATGAATCCATCTGCCATGAc > 1:188033/3‑140 (MQ=255) gcaaCACAATCAAAGGATAAAAAAACATATGATATAACCCTTGAAAATCCAAAGGGAACTTACTTTGTAAAAGCAGACGCAATATCGGCTGACATTCTTTCAATGAATAGAGTAAAAGCGATGAATCCATCTGCCATGAc > 1:1409462/3‑140 (MQ=255) tAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACa > 2:2251873/1‑140 (MQ=255) tAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACa > 2:1357668/1‑140 (MQ=255) tAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACa < 1:782492/140‑1 (MQ=255) tAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACa < 1:2153211/140‑1 (MQ=255) tAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACa < 1:1837027/140‑1 (MQ=255) gTCAAAGGATAAAAAAACATATGACATGACCCTTGACAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAaag > 1:1190762/1‑140 (MQ=255) gTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAaag > 1:872954/1‑140 (MQ=255) tCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAaaga > 1:1516984/1‑140 (MQ=255) ctAAAAAAACAAATGACATGACCCTTGAAAATCCAAATGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAg < 2:351993/139‑1 (MQ=255) aTAACAAAACATCTGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAg < 2:1825944/140‑1 (MQ=255) aTAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAg < 1:183084/140‑1 (MQ=255) aaaaaaCATATGACATTAAAATATAAAATCCAAAGGGAACTTATTTTATAAAATATTACGCAAAATCAGCTAACATTCTTTCGATGAACAGAATAAAACCGATGAATCCATCTGCCATGAAAGAAAAAAAAAcccaacaa > 2:1412272/1‑134 (MQ=255) aaaaaaCATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCAt > 2:1727414/1‑140 (MQ=255) aaaaaaCATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCAt > 2:225913/1‑140 (MQ=255) aaaaaaCATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCAt > 2:1399774/1‑140 (MQ=255) aaaaaaCATATAACATTAAAATTGAAAATCCAAAGGGAAATTATAAAATAAAATCTGACGCAAAATCAGATAAAATTCTTTCTATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCAt > 2:1122767/1‑140 (MQ=255) aaaaCATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCAtct < 2:1231823/140‑1 (MQ=255) catgacCCTGGAAAATCCAAAGGGAACGTATTTTATAACAGCTGACGCAAAATCAGCTAACATTCGTTCGATGAACAGAGTAAAAGCGATGCATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGc < 2:794211/140‑1 (MQ=255) tgacCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCgg < 1:1727414/140‑1 (MQ=255) tgacCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCgg < 1:872669/140‑1 (MQ=255) tgacCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCgg < 1:1399774/140‑1 (MQ=255) tgacCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCgg < 1:225913/140‑1 (MQ=255) taacCCTTGAAAATCCAAAGGGAACTTACTTTGTAAAAGCAGACGCAATATCGGCTGACATTCTTTCAATGAATAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCgg < 2:188033/138‑1 (MQ=255) taacCCTTGAAAATCCAAAGGGAACTTACTTTGTAAAAGCAGACGCAATATCGGCTGACATTCTTTCAATGAATAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCgg < 2:1409462/138‑1 (MQ=255) gacCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCggg > 1:1726816/1‑140 (MQ=255) acCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGt > 1:877511/1‑140 (MQ=255) acCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGt > 1:513795/1‑140 (MQ=255) ccTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGc > 2:620939/1‑140 (MQ=255) ttGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCg > 1:246580/1‑140 (MQ=255) tGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCgg > 1:1311607/1‑140 (MQ=255) aCTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAACAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAaaaca < 1:1166342/140‑1 (MQ=255) cTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAaaacaa > 1:1386231/1‑140 (MQ=255) ttATTTTATAAAAGCTGACGCAACATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAaaacaaa < 2:1516725/140‑1 (MQ=255) ttATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAaaacaaa < 2:112910/140‑1 (MQ=255) ttATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAaaacaaa < 2:829386/140‑1 (MQ=255) ttATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAaaacaaa < 2:1515451/140‑1 (MQ=255) ttATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAaaacaaa < 2:112885/140‑1 (MQ=255) ttATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAaaacaaa < 2:1118751/140‑1 (MQ=255) ttATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAaaacaaa < 2:13648/140‑1 (MQ=255) ttATGTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAaaacaaa < 2:1714521/140‑1 (MQ=255) aTTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAaacaaaca < 2:870942/140‑1 (MQ=255) ttATAAAATATGACTCATAATGTGCTTACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCTTATGCCATGACAGAATAAGAAGCGGAGCATCTGGCGGTTGCGCGGGTGCCTGGAACCGTGAAAAAACAAACagaa < 2:1858794/140‑1 (MQ=255) ttATAAAAGCTGAAGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCTAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACacaa < 1:888648/140‑1 (MQ=255) ataAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCTGGTGCCGGGAACCGTCAAAAAACAAACacaaca > 2:941125/1‑140 (MQ=255) ataAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACacaaca > 2:2403863/1‑140 (MQ=255) ataAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACacaaca > 1:386331/1‑140 (MQ=255) ataAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACacaaca > 1:1691981/1‑140 (MQ=255) aaaGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGaa < 1:1357668/140‑1 (MQ=255) aCGCAAAATCAGCTAACATTCTTTCGATGAACAGATTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGtt < 1:2230616/140‑1 (MQ=255) aCGCAAAATCAGCTAACATTCTTTCGATGAACAGATTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGtt < 2:2432301/140‑1 (MQ=255) aCGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGtt < 2:634775/140‑1 (MQ=255) aCGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGtt < 2:978262/140‑1 (MQ=255) aCGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGtt < 2:262816/140‑1 (MQ=255) aCGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGtt < 2:2432135/140‑1 (MQ=255) aCGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGtt < 2:1342552/140‑1 (MQ=255) aCGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGtt < 2:2223725/140‑1 (MQ=255) aCGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGtt < 2:2216782/140‑1 (MQ=255) aCGCAAAATCAGCTAACATTCTGTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGtt < 2:24759/140‑1 (MQ=255) cGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAACCACAACAGAATCGTGTTg < 1:2315747/140‑1 (MQ=255) cGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGTTg < 1:883919/140‑1 (MQ=255) cGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGTTg < 1:660011/140‑1 (MQ=255) cGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGTTg < 1:599802/140‑1 (MQ=255) cGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGTTg < 1:599813/140‑1 (MQ=255) gCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGTTGc < 2:1367351/140‑1 (MQ=255) gCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGTTGc < 1:841445/140‑1 (MQ=255) cAAAATGAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGTTGcc < 2:2119688/140‑1 (MQ=255) cAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGTTGcc < 1:1920860/140‑1 (MQ=255) ggCTGACATTCTTTCAATGAATAGAGTAAAAGCAGTGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACGGGCAAAAAACAAACACGGCAAAGTCAAGTTGCCACTtata > 1:2268561/2‑140 (MQ=255) aaCATTCTTTCGATGACCAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCGTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGTTGCCACATATCCCAt > 1:945731/1‑140 (MQ=255) aaCATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGTTGCCACATATACCAt > 1:507114/1‑140 (MQ=255) aaCATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGTTGCCACATATACCAt > 1:364727/1‑140 (MQ=255) ttCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGTTGCCACATATACCATTCaa > 1:1008105/1‑140 (MQ=255) | GTAGAAGCCTCTTATGAAGGAAAGGTCACGAAAGTAACACAGTCAAAGGATAAAAAAACATATGACATGACCCTTGAAAATCCAAAGGGAACTTATTTTATAAAAGCTGACGCAAAATCAGCTAACATTCTTTCGATGAACAGAGTAAAAGCGATGAATCCATCTGCCATGACAGAAAAAGAAGCCGAGCATCTCGCGCTTGAGCGGGTGCCGGGAACCGTCAAAAAACAAACACAACAGAATCGTGTTGCCACATATACCATTCAA > NZ_CP034943/1365623‑1365889 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |