| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,397,487 | T→C | 5.1% | V58V (GTT→GTC) | mtnE → | methionine‑glutamine aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,397,487 | 0 | T | C | 5.1% | 313.6 / 5.0 | 97 | V58V (GTT→GTC) | mtnE | methionine‑glutamine aminotransferase |
| Reads supporting (aligned to +/- strand): ref base T (36/56); new base C (2/3); total (38/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.60e-01 | |||||||||||
TAAACAATTCTTCGCTTCTTTGGTGCAGAAAGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTCGCTGTATTATTCGGCGG > NZ_CP034943/1397352‑1397621 | tAACCAAGTCGTCGCGTCTTTGGTGCAGAAAGTGCACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTg < 2:995188/140‑1 (MQ=255)tAAACAATTCTTCGCTTCTTTGGTGCAGAAAGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTg < 2:2090534/140‑1 (MQ=255) aTTCTTCGCTTCTTTGGTGCAGAAAGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTg > 1:451400/1‑140 (MQ=255) aTTCTTCGCTTCTTTGGTGCAGAAAGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTg < 2:1534433/140‑1 (MQ=255) ttcttcGCTTCTTTGGTGCAGAAAGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGa < 1:1137380/140‑1 (MQ=255) tcttcGCTTCTTTGGTGCAGAAAGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGaa < 2:2128102/140‑1 (MQ=255) tcttcGCTTCTTTGGTGCAGAAAGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGaa < 2:2401839/140‑1 (MQ=255) tcttcGCTTCTTTGGTGCAGAAAGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGaa < 2:302096/140‑1 (MQ=255) tcttcGCTTCTTTGGTGCAGAAAGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGaa > 2:423482/1‑140 (MQ=255) tcttcGCTTCTTTGGTGCAGAAAGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTCaa > 2:1851225/1‑140 (MQ=255) cttTGGTGCAGAAAGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATaaa > 1:996375/1‑140 (MQ=255) tttGGTGCAGAAAGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAACTGAAACGAGCCGTTGCTGATCCTGAAAATCCTaact > 2:1590252/1‑138 (MQ=255) tttGGTGCAGAAAGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAat > 2:363519/1‑140 (MQ=255) tttGGTGCAGAAAGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATAATAAat > 2:2180660/1‑140 (MQ=255) ggTGCAGAAAGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATAtt < 2:1743629/140‑1 (MQ=255) gAAAGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGACCATATCGTCGAGGAAATGAACCGAGCCGTTGCTGATCCTGACAATCATAAATATTCGTCtt > 1:239081/1‑140 (MQ=255) aGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTc < 2:276111/140‑1 (MQ=255) aGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTc < 2:1053080/140‑1 (MQ=255) aGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTc < 2:1426444/140‑1 (MQ=255) aGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTc < 2:1737907/140‑1 (MQ=255) aGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTc < 1:1790889/140‑1 (MQ=255) aGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTc < 2:2377835/140‑1 (MQ=255) aaCCGAAAGCTTGCAGAAGGACATGACGTTATCAATCTGGGACAGGGAAATCCAGATCAGCCGACTCCTGAGCATATTGTTGAGGAGATGAAACGAGCTGTCGCTGATCCTGAGAATCATAAATATTCGTCTTTTCGCgg < 1:1481665/140‑1 (MQ=255) aaCCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCgg < 1:2332951/140‑1 (MQ=255) aaCCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCgg < 1:2429809/140‑1 (MQ=255) aaCCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCAGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCgg < 1:2261912/140‑1 (MQ=255) aGCTCTCAGAAGGACACGACGTTATAAATCTCGGACAGGGAAATCCGGATCAGCAGACTCCGGAACATATCGTCGAGGAAATCAAAAGAGCCGTTGCTTATCCTGAAAATCATAAATATTCGTCTTTTCGCGTCTCATAc < 2:182439/140‑1 (MQ=255) tctcAGACGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGACCATCTCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATACATATTCGTCTTTTCGCGGCTCATACAGc < 2:331700/140‑1 (MQ=255) cctcAGCAGGACACGACCTGATCAATCCCGCACACGGACCTCCGGACCAGCCGACTCCCGAAGAGATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCCGCAAATCCGACATATTCGTCTGTTCGCGGCTCATACAGc < 2:1915650/139‑1 (MQ=255) aaGGCCACGACGTTATCAATCTCGCACAGGGAAATCCGTATCAGCCGACTCCGGAACATATCGTGTTGGAAATGAAACTCGCCGTTGCTGCTCCTGAAAATCATAAATATTCGACTTTTCGCGCCTCATACACCCTGaaa < 1:567379/140‑1 (MQ=255) aaGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGaaa < 1:1003149/140‑1 (MQ=255) gACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGACATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCa > 1:586984/1‑140 (MQ=255) gACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCa > 1:1344644/1‑140 (MQ=255) gACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCa > 1:799011/1‑140 (MQ=255) acgacgTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGcc > 1:1032893/1‑140 (MQ=255) acgacgTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGcc > 1:255797/1‑140 (MQ=255) cgacgTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCg < 2:1818403/140‑1 (MQ=255) cgacgTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCg < 2:1683428/140‑1 (MQ=255) cgacgTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACAGATCGTCGAGGAAATGCAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCg < 2:1403189/140‑1 (MQ=255) tCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCgcagcagca < 2:76434/140‑1 (MQ=255) tCAATCTCGGACAGCGACATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATACATATTCGTCTTTTCGCGGCTCAGACAGCCTGAAATCAGCCgcagcagca < 1:1965074/140‑1 (MQ=255) cGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGATCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGACGCAGCAGCATTTtata > 1:1582626/1‑140 (MQ=255) cGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTtata > 1:2363553/1‑140 (MQ=255) cGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTtata > 1:1890920/1‑140 (MQ=255) gACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAg > 1:495549/1‑140 (MQ=255) aGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCga < 2:1344644/140‑1 (MQ=255) gggAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTTCTGATCCTTAAAATCATAAATATTAGTCTTTTAGCGGCTCATACAGCCTGAAATAAGCCCCAGCAGCATTTTATAAGCgag > 1:23807/1‑140 (MQ=255) gggAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCTCGGCTCAAACAGACTGAAAACAGCCGCAGAAGCATTTTATAAACgag > 1:2426310/1‑140 (MQ=255) ggAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCgaga > 1:1685273/1‑140 (MQ=255) ggAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCgaga > 1:1685333/1‑140 (MQ=255) ggAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCgaga > 1:2081509/1‑140 (MQ=255) ggAAATCCAGATCAGCCGACTCCTGAGCATATTGTTGAGGAGATGAAACGAGCTGTCGCTGATCCTGAGAATCATAAATATTCGTCTTTTCGCGGCTCATACCGTCTGAAGTCAGCGGCTGCTGCATTTTACAAAAgaga > 2:1844741/1‑140 (MQ=255) ggAAATCCAGATCAGCCGACTCCTGAGCATATTGTTGAGGAGATGAAACGAGCTGTCGCTGATCCTGAGAATCATAAATATTCGTCTTTTCGCGGCTCATACCGTCTGAAGTCAGCGGCTGCTGCATTTTACAAAAgaga > 2:1341566/1‑140 (MQ=255) ggATCAGCCGCCTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCa < 1:1408434/140‑1 (MQ=255) ggATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCa < 1:1389318/140‑1 (MQ=255) ggATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCa < 2:346093/140‑1 (MQ=255) ggATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCa < 1:786317/140‑1 (MQ=255) aTCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCAtt > 2:763878/1‑140 (MQ=255) cGACTCGGGATCATCTCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGGAGCAGCATTTTATAAGCGAGAATACGGCATTGATCtt < 2:1262175/140‑1 (MQ=255) cGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCtt < 2:2316492/140‑1 (MQ=255) cGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCtt < 2:126514/140‑1 (MQ=255) cGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCtt < 2:1920973/140‑1 (MQ=255) acatgAACATAACATAGAGGAAAAGAAACGAGCCGTTGCTGATCCTGAAAAACATAAAAATTCGTCTTTTCGACGATCATAAAGAATTAAATCAGCCGAAGCAGCATTATAAAAGCGAGAATACGGCATTGATCATGAca > 2:590809/5‑139 (MQ=255) aaCATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGaa > 2:2058002/1‑140 (MQ=255) atCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCATCCGCAGCAGCATTTTATAAGCGAGAATACGGCAATGATCTTGACCCAGAAACTGa > 1:329314/1‑140 (MQ=255) atCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGa < 1:925436/140‑1 (MQ=255) atCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGa > 1:1442225/1‑140 (MQ=255) atCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGa > 1:825461/1‑140 (MQ=255) atCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGa < 1:749969/140‑1 (MQ=255) atCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGa < 1:2189928/140‑1 (MQ=255) tcgtcgAGGAAATGAAACGAGCCGTTGCTTATCCTGAACATCAGAAATATTCGTCTTTTCGCGGCTGATACAGCCTGAAATCAGCCGCAGCATGATTTTATAAGCCAGTATACGGCATTGATCTTGACCCATAAACTGaa < 2:583811/140‑1 (MQ=255) cgtcgAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAg > 2:577429/1‑140 (MQ=255) cgtcgAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAg > 2:2124187/1‑140 (MQ=255) cgtcgAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAg > 2:2220263/1‑140 (MQ=255) cgtcgAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATCTTATAAGCGAGAATACGGCATGGATCTTGACCCAGAAACTGAAg < 2:169469/140‑1 (MQ=255) cctcgAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAg < 2:14655/138‑1 (MQ=255) tcgAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTc > 2:535596/1‑140 (MQ=255) tcgAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTc > 2:622289/1‑140 (MQ=255) cgAGGAAATGAAACGAGCCGTTGCTGATCCTTAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTCg < 1:1851225/140‑1 (MQ=255) cgAGGAAATGAAACGAGCCGTTGCTGATCCTGAAACTCATAAATATTCGTCTGTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGGCg < 2:522120/140‑1 (MQ=255) cgAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTCg < 2:541161/140‑1 (MQ=255) cgAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTCg < 2:626595/140‑1 (MQ=255) cgAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTCg < 1:1238295/140‑1 (MQ=255) cgAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTCg < 1:423482/140‑1 (MQ=255) cgAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTCg < 1:590984/140‑1 (MQ=255) cgAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTCg < 1:590809/140‑1 (MQ=255) cgAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTCg < 1:514281/140‑1 (MQ=255) cgAGGAAAGGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTCg < 1:1468256/140‑1 (MQ=255) aGGACATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATCTTCGTCTTTTCGCGGCTCATACAGCCTGAAAGCAGCCGCCGCAGCATTTTCTAAGCGAGAATACGGCCTTGATCTTGCCCCAGCAACGGAAGTCGCt > 2:2041891/1‑140 (MQ=255) cGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTCGCTGTATTATTcgg < 2:445788/140‑1 (MQ=255) cGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTCGCTGTATTATTcgg < 2:1958246/140‑1 (MQ=255) cGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTCGCTGTATTATTcgg < 2:1067291/140‑1 (MQ=255) gAGCTGTCGCTGATCCTGAGAATCATAAATATTCGTCTTTTCGCGGCTCATACCGTCTGAAGTCAGCGGCTGCTGCATTTTACAAAAGAGAATACGGCATTGATCTGGATCCGGAAACCGAAGTCGCTGTATTATTcggc < 1:1844741/140‑1 (MQ=255) gAGCTGTCGCTGATCCTGAGAATCATAAATATTCGTCTTTTCGCGGCTCATACCGTCTGAAGTCAGCGGCTGCTGCATATTACAAAAGAGAATACGGCATTGATCTGGATCCGGAAACCGAAGTCGCTGTATTATTcggc < 1:1341566/140‑1 (MQ=255) aGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTCGCTGTATTATTcggcg > 1:665720/1‑140 (MQ=255) aGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTCGCTGTATTATTcggcg > 1:543605/1‑140 (MQ=255) gCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTCGCTGTATTATTcggcgg < 2:495549/140‑1 (MQ=255) | TAAACAATTCTTCGCTTCTTTGGTGCAGAAAGTGAACCGAAAGCTCTCAGAAGGACACGACGTTATCAATCTCGGACAGGGAAATCCGGATCAGCCGACTCCGGAACATATCGTCGAGGAAATGAAACGAGCCGTTGCTGATCCTGAAAATCATAAATATTCGTCTTTTCGCGGCTCATACAGCCTGAAATCAGCCGCAGCAGCATTTTATAAGCGAGAATACGGCATTGATCTTGACCCAGAAACTGAAGTCGCTGTATTATTCGGCGG > NZ_CP034943/1397352‑1397621 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |