| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,465,903 | T→C | 5.4% | I147I (ATT→ATC) | EO946_RS07670 → | ABC transporter ATP‑binding protein/permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,465,903 | 0 | T | C | 5.4% | 492.1 / 11.6 | 152 | I147I (ATT→ATC) | EO946_RS07670 | ABC transporter ATP‑binding protein/permease |
| Reads supporting (aligned to +/- strand): ref base T (57/86); new base C (4/4); total (61/91) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.42e-01 | |||||||||||
Only 100 of 155 total aligned reads displayed.
TTAAGAATCAGGTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCTGAGTCCTGAGCTGACTATCGCCATCATGGTGACAC > NZ_CP034943/1465769‑1466042 | ttAAGAATCAGGTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTatgaa > 1:1160161/1‑140 (MQ=255)ttAAGAATCAGGTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTatgaa > 2:1612676/1‑140 (MQ=255) tAAGAATCAGGTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTatgaat < 1:950927/140‑1 (MQ=255) tAAGAATCAGGTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTatgaat < 1:852808/140‑1 (MQ=255) aaGAATCAGGTGGATGAATAAGCTTGGCCAGCATGTCATTTACGATTTGCGACAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCGGGATCGATCTTAGTCAGGATCatgaatg > 1:1289793/1‑140 (MQ=255) aaGAATCAGGTGGATGAATAAGCTTGGCCAGCATGTCATTTACGATTTGCGACAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCGGGATCGATCTTAGTCAGGATCatgaatg > 1:418358/1‑140 (MQ=255) aaGAATCAGGTGGATGAATAAGCTTGGCCAGCATGTCATTTACGATTTGCGACAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCGGGATCGATCTTAGTCAGGATCatgaatg > 1:57072/1‑140 (MQ=255) tCAGGTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATAtt > 1:2314027/1‑140 (MQ=255) tCAGGTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATAtt > 1:738918/1‑140 (MQ=255) cAGGTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTa > 1:1490562/1‑140 (MQ=255) ggTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAAc > 1:9662/1‑140 (MQ=255) ggTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAAc > 2:1816126/1‑140 (MQ=255) ggTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAAc > 2:1603358/1‑140 (MQ=255) gTGGATGAATCAGCTTGGCCAGCATGTGATCTACGATTTGCGCCAGCATTTATTTCCCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAAct < 1:613876/140‑1 (MQ=255) gTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAAct < 1:1890309/140‑1 (MQ=255) gTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAAct < 1:1824843/140‑1 (MQ=255) gTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAAct < 2:4646/140‑1 (MQ=255) gTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAAct < 1:2089518/140‑1 (MQ=255) gTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAAct < 1:427229/140‑1 (MQ=255) gTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAAct < 1:1433188/140‑1 (MQ=255) aTGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAActctct > 1:2064343/1‑140 (MQ=255) aTCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAg < 2:1700974/140‑1 (MQ=255) aTCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAg < 2:1700984/140‑1 (MQ=255) cAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTCTCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGa > 1:776190/1‑140 (MQ=255) cAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTAAGGa > 1:1311910/1‑140 (MQ=255) aGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAg < 2:1669794/140‑1 (MQ=255) aGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAg < 2:2155551/140‑1 (MQ=255) aGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCAGGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAg < 2:1757541/140‑1 (MQ=255) cTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTatgaa > 2:1450113/1‑116 (MQ=255) cTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTatgaa < 1:1450113/116‑1 (MQ=255) cATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTGTCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAg > 2:2161687/1‑140 (MQ=255) gATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAg > 1:1399606/1‑140 (MQ=255) taCGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGtcat < 1:2043836/140‑1 (MQ=255) taCGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGtcat < 1:1034751/140‑1 (MQ=255) taCGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGtcat < 1:216245/140‑1 (MQ=255) aCGATTTGCGCCAGCATTTATTTACCCATGTGGAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGtcatc < 2:1892839/140‑1 (MQ=255) aCGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTatgaat < 2:2138043/98‑1 (MQ=255) aCGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGtcatc < 1:1990655/140‑1 (MQ=255) aCGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGtcatc > 2:1650976/1‑140 (MQ=255) tttGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACt > 1:1688156/1‑140 (MQ=255) tttGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTAAGGAGCTCTTTACAAGCGGAGTCATCAACt > 1:919728/1‑140 (MQ=255) ccAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGCTCAGCGGTCGGCAGGATCGATCTTGCTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGa < 2:703695/140‑1 (MQ=255) ccAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGTTTATGAATGAGATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGa < 1:973521/140‑1 (MQ=255) ccAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGa < 2:851575/140‑1 (MQ=255) ccAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGa < 1:369111/140‑1 (MQ=255) cATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGa < 2:1923827/140‑1 (MQ=255) cATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGa > 1:2085205/1‑140 (MQ=255) cATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGa < 2:282753/140‑1 (MQ=255) cATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGa < 2:1892896/140‑1 (MQ=255) cATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGa < 2:130431/140‑1 (MQ=255) cATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGa < 1:173803/140‑1 (MQ=255) aCCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCt < 2:2064343/140‑1 (MQ=255) aTGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTg > 1:827213/1‑140 (MQ=255) tgCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGcc > 1:2397701/1‑140 (MQ=255) gCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCg < 2:96996/140‑1 (MQ=255) cgcTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTaa < 2:1687038/71‑1 (MQ=255) cgcTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTaa > 1:1197251/1‑71 (MQ=255) cgcTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTaa > 1:1687038/1‑71 (MQ=255) cTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGCTCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGATCTTTACAAGCGGAGTCATCAACTTATTTACGGACTTGCTCCTTCTGGCCGGCGTTa > 1:350433/1‑140 (MQ=255) cTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTa < 2:1012706/140‑1 (MQ=255) cTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTa > 2:88074/1‑140 (MQ=255) cTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTa < 2:197286/140‑1 (MQ=255) tATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTatc > 1:1367909/1‑140 (MQ=255) tATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTatc > 1:1367829/1‑140 (MQ=255) aTCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTatca > 1:1970753/1‑140 (MQ=255) aTCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGAGTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTatca > 1:623205/1‑140 (MQ=255) aTCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCAtt > 2:372943/1‑140 (MQ=255) aTCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCAtt > 2:578133/1‑140 (MQ=255) aTCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCAtt > 2:820946/1‑140 (MQ=255) aTCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCAtt > 2:1554009/1‑140 (MQ=255) aTTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGt < 2:1179059/140‑1 (MQ=255) aTTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGt < 2:902897/140‑1 (MQ=255) gATCAGCGGTCGGCAGGATCGATCTTGGTCTGGATTATGTTTGTTTTTTTGTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCt < 1:1917339/140‑1 (MQ=255) gATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCt < 1:88074/140‑1 (MQ=255) gATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCt < 1:1110662/140‑1 (MQ=255) gATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCt < 1:1554009/140‑1 (MQ=255) gATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCt < 1:1593744/140‑1 (MQ=255) gATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCt < 1:1612676/140‑1 (MQ=255) gATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCt < 1:1816126/140‑1 (MQ=255) gATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCt < 1:1917280/140‑1 (MQ=255) gATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCt < 1:2147269/140‑1 (MQ=255) gATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCt < 1:578133/140‑1 (MQ=255) gATCAGCGGGCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCt < 2:1449198/140‑1 (MQ=255) gCGGTCGGCGGGATCGATCTTAGTCAGGATCATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAATTTGTTGACCGACTTGCTGCTTCTGGCCGGCGTGATTATTATTTTGTTTACGCTGAgcc < 2:1565342/140‑3 (MQ=255) gCGGTCGGCGGGATCGATCTTAGTCAGGATCATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAATTTGTTGACCGACTTGCTGCTTCTGGCCGGCGTGATTATTATTTTGTTTACGCTGAgcc < 2:418358/140‑3 (MQ=255) gCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCTGAGTc < 2:276099/140‑1 (MQ=255) gCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCTGAGTc < 2:77310/140‑1 (MQ=255) cGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCTGAGTCCTGAg < 1:354051/140‑1 (MQ=255) cGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCTGAGTCCTGAg < 1:1224775/140‑1 (MQ=255) tcgatcTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGGCTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCTGAGTCCTGAGCTGACTAt < 2:1160161/140‑1 (MQ=255) tcgatcTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCTGAGTCCTGAGCTGACTAt < 1:1311511/140‑1 (MQ=255) tcTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCTGAGTCCTGAGCTGACTATCGcc < 2:621504/140‑1 (MQ=255) ttGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCTGAGTCCTGAGCTGACTATCGCcat < 2:1203930/140‑1 (MQ=255) ttGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCTGAGTCCTGAGCTGACTATCGCcat < 1:2043752/140‑1 (MQ=255) gATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCt > 2:1303588/1‑108 (MQ=255) gATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCTGAGTCCTGAGCTGACTATCGCCATCATGGTGa < 1:1903466/140‑1 (MQ=255) gATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCTGAGTCCTGAGCTGACTATCGCCATCATGGTGa < 1:90195/140‑1 (MQ=255) tATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCTGAGTCCTGAGCTGACTATCGCCATCATGGTGacac < 2:1399606/140‑1 (MQ=255) tATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCTGAGTCCTGAGCTGACTATCGCCATCATGGTGacac < 2:1399745/140‑1 (MQ=255) tATGAATGATATTAACTCTCGTCAGGAGCTCTGTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCTGAGTCCTGAGCTGACTATCGCCATCATGGTGacac < 2:2041799/140‑1 (MQ=255) | TTAAGAATCAGGTGGATGAATCAGCTTGGCCAGCATGTGATATACGATTTGCGCCAGCATTTATTTACCCATGTGCAGCGCTTATCCCATCGATTTTTTGATCAGCGGTCGGCAGGATCGATCTTGGTCAGGATTATGAATGATATTAACTCTCTTCAGGAGCTCTTTACAAGCGGAGTCATCAACTTATTGACGGACTTGCTCCTTCTGGCCGGCGTTATCATCATTTTGTTTACGCTGAGTCCTGAGCTGACTATCGCCATCATGGTGACAC > NZ_CP034943/1465769‑1466042 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |