| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,566,216 | A→G | 7.5% | N132D (AAT→GAT) | EO946_RS08175 → | S8 family serine peptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,566,216 | 0 | A | G | 7.5% | 290.2 / 8.4 | 95 | N132D (AAT→GAT) | EO946_RS08175 | S8 family serine peptidase |
| Reads supporting (aligned to +/- strand): ref base A (46/41); new base G (4/3); total (50/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGCGAAATCGAAGAAGCTGACTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATGAGAAACGGCAGTTGT > NZ_CP034943/1566089‑1566354 | aGCGAAATAGAAGAAGCTGACTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATg < 1:1249231/140‑1 (MQ=255) gAAATCGAAGAAGCTGTCTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCTGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGCAAGATGTCCTAAAATACTTGAACACCCAGAAAGATAAAGGAAATGCAg > 1:1031550/1‑140 (MQ=255) gAAATCGAAGAAGCTGTCTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCTGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGCAAGATCTCCTAAAATACTTGAACACCCAGAAAGATAAAGGAAATGCAg > 1:12116/1‑140 (MQ=255) gAAATCGAAGAAGCTGTCTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCTGTTGTGTCATCGGTAAAAGTCACAGCCGATGAATCCCAGCAAGATGTCCTAAAATACTTGAACACCCAGAAAGATAAAGGAACTGCAg > 1:344932/1‑140 (MQ=255) gAAATCGAAGAAGCTGACTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAg > 2:699237/1‑140 (MQ=255) gAAATCGAAGAAGCTGACTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAg > 2:64897/1‑140 (MQ=255) gAAATCGAAGAAGCTGACTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAg > 2:424298/1‑140 (MQ=255) aaTCGAAGAAGCTGACTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGAc < 2:879214/140‑1 (MQ=255) aaTAGAAGCAGCTGACTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGAc < 2:1904073/140‑1 (MQ=255) agaagCTGACTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAAtt < 1:2280990/140‑1 (MQ=255) agCTGACTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCAc < 2:388800/140‑1 (MQ=255) agCTGACTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCAc < 1:543420/140‑1 (MQ=255) agCTGACTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCAc < 1:1487966/140‑1 (MQ=255) agCTGACTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCAc < 1:2357028/140‑1 (MQ=255) cTGACTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCActc < 1:820407/140‑1 (MQ=255) cTGACTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCActc < 1:690877/140‑1 (MQ=255) cTGACTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCActc < 1:1070376/140‑1 (MQ=255) cTGACTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCActc < 1:2254203/140‑1 (MQ=255) aCTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAACTGCAGACCAAATTCACTCtta < 1:1124822/140‑1 (MQ=255) aCTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCtta < 2:645469/140‑1 (MQ=255) aCTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAAGTCACTCtta < 2:2248411/140‑1 (MQ=255) aCTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGGCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCtta < 2:1356889/140‑1 (MQ=255) cGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATg < 2:2406641/140‑1 (MQ=255) cTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGACTCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTa > 2:886511/1‑140 (MQ=255) tctgAATATCACACGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCAGATGAATCCCAGAGCGATGTCTTAACATACTTGATCAGCCAGAAATATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGaa < 1:1819444/137‑1 (MQ=255) aCGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGaa < 1:942204/140‑1 (MQ=255) aCGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGaa < 1:1161503/140‑1 (MQ=255) gAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATgg < 2:317772/140‑1 (MQ=255) gAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATgg < 1:1552702/140‑1 (MQ=255) gAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATgg < 1:2393446/140‑1 (MQ=255) aaTATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATggg > 2:1227119/1‑140 (MQ=255) aaTATCAAAAGCGTTCTGCCGTTGTGTCATCTGTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATggg > 2:671519/1‑140 (MQ=255) tCAAAACCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCCATGAATCCCAGAGAGATGTCTTAACATACGTGAACAGCCAGAAAAATAAGCGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCg < 1:2292172/140‑1 (MQ=255) aaaaGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCttatt < 1:2312486/120‑1 (MQ=255) aaaaGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCttatt > 2:2312486/1‑120 (MQ=255) aaaGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGACAAATAAGGGAAATGCAGACCAAATTCACTCTTATTCTGTAGTGAATGGGATCGCTg > 2:1979928/1‑140 (MQ=255) ttCTGCCGTTGTGTCATCTTTAAAAGTCACATCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTATTGAATGGGATCGCTGTTCAtt > 1:1382450/1‑139 (MQ=255) ttCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATg > 1:565514/1‑140 (MQ=255) tCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGc > 1:302170/1‑140 (MQ=255) gtgtCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAaaga > 2:1309745/1‑140 (MQ=255) cATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTg < 1:1715344/140‑1 (MQ=255) aTCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCActc > 2:2286657/1‑93 (MQ=255) aTCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCActc < 1:2286657/93‑1 (MQ=255) aTCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGTATGGGATCGCTGTTCATGCCTCAAAAGTAGTGa > 1:2401762/1‑140 (MQ=255) aTCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGa > 1:754957/1‑140 (MQ=255) cacaGCCGATGAATCCCAGCAAGATGTCCTAAAATACTTGAACACCCAGAAAGATAAAGGAAATGCAGACCAAATTCATTCTTATTATGTGGTGAACGGGATTGCTGTTCATGCCTCAAAAGAGGTTATGGAAAAAGtgg > 1:1725982/1‑138 (MQ=255) cacaGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAg > 2:45081/1‑140 (MQ=255) caGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAgcg < 1:699237/140‑1 (MQ=255) caGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAgcg < 1:64897/140‑1 (MQ=255) caGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAgcg < 1:2256279/140‑1 (MQ=255) caGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAgcg < 1:424298/140‑1 (MQ=255) aTGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTc > 1:1072817/1‑140 (MQ=255) gAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTccc < 2:145542/140‑1 (MQ=255) tCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGa > 1:1969260/1‑140 (MQ=255) tCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGGAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGCAAAAGTAGCGCAGTTCCCCGa > 2:1528378/1‑140 (MQ=255) aTGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAg > 1:1382348/1‑140 (MQ=255) tGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAgg > 2:400538/1‑140 (MQ=255) tGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAgg > 2:1764760/1‑140 (MQ=255) tGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAgg > 1:1151295/1‑140 (MQ=255) tGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATCGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAgg > 1:2368175/1‑140 (MQ=255) gTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTTATGGAATTAGTATATAATTTACCCGATGTGGaaattgt < 2:5932/140‑5 (MQ=255) gTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGt < 2:1117270/140‑1 (MQ=255) gTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGt < 2:2351456/140‑1 (MQ=255) tCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAACTTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTg > 2:311552/1‑140 (MQ=255) tCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTg > 2:136530/1‑140 (MQ=255) tCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTg > 2:1990016/1‑140 (MQ=255) tCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTg > 2:1675194/1‑140 (MQ=255) tCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTg > 2:1836331/1‑140 (MQ=255) tCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTg > 2:1836341/1‑140 (MQ=255) tACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTGATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCaaaa > 1:884106/1‑140 (MQ=255) aCTTGAACAGCCAGTAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCACAt > 1:1541757/1‑140 (MQ=255) cTTGAACAGCCAGAGAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAgcg < 2:1553618/106‑1 (MQ=255) cTTGAACAGCCAGAGAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAgcg > 1:1553618/1‑106 (MQ=255) cTTGAACAGCCAGAAAAATAAGGTAAATTCAGACCAAATCAACTCTTATTATGTAGTGAATGTGATCTCTGTTCATGACTAAAAAGAAGTGATGTAAAAAGTAGCGCAGTTCCCCGAACTGGACAAGGTGCTTCCAAAtc > 1:135416/1‑139 (MQ=255) cTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATg > 2:965414/1‑140 (MQ=255) cTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATg > 1:1051045/1‑140 (MQ=255) cTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATg > 2:2154130/1‑140 (MQ=255) cTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATg > 1:1051086/1‑140 (MQ=255) cTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATg > 1:17152/1‑140 (MQ=255) cTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATg > 1:1910048/1‑140 (MQ=255) cTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATg > 2:110267/1‑140 (MQ=255) cTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATg > 1:1816016/1‑140 (MQ=255) cTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTAGGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGTAGTGATGGCAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATg > 1:1891409/1‑140 (MQ=255) cTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTAGTATGTAGTGAATGGGATCGCTGTTCATGCGTCAAAAGCAGGGATGGAAAATGTAGCGCAGTTCCCCGAAGTGGAATAGGTGCTTCCAAGTg > 1:1909776/1‑140 (MQ=255) ccAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGACAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATGAGAAACGGc > 2:400570/1‑140 (MQ=255) cAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATGAGAAACGGCa < 1:173827/140‑1 (MQ=255) aGAAAGATAAAGGCAATGCAGACCAAATTCATTCTTATTATGTGGTGAACGGGTTTGCTGTTCATGCCTCAAAAGAGGTTATGGAAAAAGTGGTGCAGTTTCCCGAAGTGGAAAAGGTGCTTCCTAATGAGAAACGGCAg < 2:344932/140‑1 (MQ=255) aGAAAGATAAAGGAAATGCAGACCAAATTCATTCTTATTCTGTGGTGAACGGGATTGCTGTTCATGCCTCAAAAGAGGTTATGGAAAAAGTGGTGCAGTTTCCCGAAGTGGAAAAGGTGCTTCCTAATGAGAAACGGCAg < 2:12116/140‑1 (MQ=255) aGAAAGATAAAGGAAATGCAGAACAAATTCATTCTTATTATGTGGTGAACGGGATTGCTGTTCATGCCTCAAAAGAGGTTATGGAAAAAGTGGTGCAGTTTCCCGAAGTGGAAAAGGTGCTTCCTAATGAGAAACGGCAg < 2:1031550/140‑1 (MQ=255) aGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATgaga > 2:2217688/1‑132 (MQ=255) aGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATgaga < 1:2217688/132‑1 (MQ=255) aGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATGAGAAACGGCAg < 1:965414/140‑1 (MQ=255) aGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATGAGAAACGGCAg < 2:62799/140‑1 (MQ=255) aGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATGAGAAACGGCAg < 2:1323180/140‑1 (MQ=255) aGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATGAGAAACGGCAg < 2:2176141/140‑1 (MQ=255) aaaTAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGTAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATGAGAAACGGCAgttgt < 2:1165463/140‑1 (MQ=255) aaaTAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATGAGAAACGGCAgttgt < 2:477316/140‑1 (MQ=255) aaaTAAGGCAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGCTCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATGAGAAACGGCAgttgt < 2:39269/140‑1 (MQ=255) | AGCGAAATCGAAGAAGCTGACTGCCGCTAAGACGGAATATCAAAAGCGTTCTGCCGTTGTGTCATCTTTAAAAGTCACAGCCGATGAATCCCAGAGAGATGTCTTAACATACTTGAACAGCCAGAAAAATAAGGGAAATGCAGACCAAATTCACTCTTATTATGTAGTGAATGGGATCGCTGTTCATGCCTCAAAAGAAGTGATGGAAAAAGTAGCGCAGTTCCCCGAAGTGGAAAAGGTGCTTCCAAATGAGAAACGGCAGTTGT > NZ_CP034943/1566089‑1566354 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |