| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,659,112 | G→A | 7.1% | G16S (GGC→AGC) | flgB → | flagellar basal body rod protein FlgB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,659,112 | 0 | G | A | 7.1% | 301.0 / 9.8 | 99 | G16S (GGC→AGC) | flgB | flagellar basal body rod protein FlgB |
| Reads supporting (aligned to +/- strand): ref base G (56/36); new base A (3/4); total (59/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.41e-01 | |||||||||||
Only 100 of 113 total aligned reads displayed.
TTTATGCCTGTTATTTCTTACAATAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATCAAGAATCCTCTCGTCTTGAAGCGATAAAAACAGACTA > NZ_CP034943/1658973‑1659251 | tttATGCCTGTTATTTCTTACAATAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTgg > 1:424181/1‑140 (MQ=255)tttATGCCTGTCATTTCTTACAATAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTgg > 1:95568/1‑140 (MQ=255) ttATGCCTGTTATTTCTTACAATAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAAAGATACAAAATCTTGAAAATGCCTTggg > 1:1556248/1‑140 (MQ=255) ttATGCCTGTTATTTCTTACAATAAGCATATAGTTGTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAATATCTTGAAAATGCCTTggg > 1:923901/1‑140 (MQ=255) tATGCCTGTTATTTCTTACAATAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGc > 1:786508/1‑140 (MQ=255) aTGCCTGTTATTTCTTACAATAAGCATATAGTTTTACAATTCTCGACACGGATATGGAGGGTGAAATACACTGAAAGGGAGGTACGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCa > 1:1338375/1‑140 (MQ=255) aTGCCTGTTATTTCTTACAATAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGACATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAACATGCCTTGGGCa > 1:620066/1‑140 (MQ=255) aTGCCTGTTATTTCTTACAATAAGCATATAGTTTTACAATTCTCGACAAGGATATGGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGACCGATACAAAATCTTGAAAATGCCTTGGGcc > 2:903996/1‑139 (MQ=255) ttATTTCTTACAATAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGACAATGCCTTGGGCAGAGCGGa > 1:608182/1‑140 (MQ=255) ttATTTCTTACAATAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGa > 2:1598763/1‑140 (MQ=255) ttATTTCTTACAATAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGa > 1:522542/1‑140 (MQ=255) ttATTTCTTACAATAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGa > 1:479440/1‑140 (MQ=255) ttCTTACAATAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATAtt < 1:2285026/140‑1 (MQ=255) aaTAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCaaa < 1:1022348/140‑1 (MQ=255) aaTAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCaaa < 1:122028/140‑1 (MQ=255) aaTAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCaaa < 1:1763781/140‑1 (MQ=255) aaTAAGCATATAGTTTTACAATTCTCGACAAGGAGATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCaaa < 1:28116/140‑1 (MQ=255) tAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCaaaaa > 1:1447640/1‑140 (MQ=255) tAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCaaaaa > 1:1917638/1‑140 (MQ=255) tAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGGAAGTGGAGTTGAGCTTATTTTCTGGAACGATACAAAATCTTGACAATGCCTTGGGCAGAGCGGATATTAAGCgaaaa > 1:1911100/1‑140 (MQ=255) aGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGt > 2:1001614/1‑140 (MQ=255) gCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGAGCAGAGCGGATATTAAGCAAAAAGTc < 1:290497/140‑1 (MQ=255) atatAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCAt < 2:1767980/140‑1 (MQ=255) ataGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATaa < 1:1106327/140‑1 (MQ=255) taGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAAc > 1:693771/1‑140 (MQ=255) tttACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACtaat > 1:1315860/1‑140 (MQ=255) tACAATTCTCGACCAGGATATTTAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATCTTAAGCAAAAAGTCATAAGtaagat > 1:1115076/1‑137 (MQ=255) tACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTACGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACtaataa > 2:385822/1‑140 (MQ=255) tACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACtcataa > 1:1115052/1‑140 (MQ=255) tACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACtaataa > 2:508460/1‑140 (MQ=255) tACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACtaataa > 2:2417440/1‑140 (MQ=255) tACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACtaataa > 1:2208657/1‑140 (MQ=255) tACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACtaataa > 1:2216394/1‑140 (MQ=255) aCAATTCTGGACAAGGATATTGAGGGTGAAAAAAACTGAATTGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTaataat < 1:1444417/140‑1 (MQ=255) ttCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAatat > 1:1323516/1‑138 (MQ=255) ttCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAatat < 2:474099/138‑1 (MQ=255) ttCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAatat > 1:474099/1‑138 (MQ=255) ttCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAatat < 2:1323516/138‑1 (MQ=255) ttCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCg < 2:1061587/140‑1 (MQ=255) ttCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCg < 2:2091107/140‑1 (MQ=255) ctcGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCTcc > 1:2047662/1‑140 (MQ=255) ctcGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGcc > 1:2240415/1‑140 (MQ=255) ctcGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGcc < 1:2415244/140‑1 (MQ=255) ctcGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGcc > 1:266144/1‑140 (MQ=255) ctcGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGcc < 1:877098/140‑1 (MQ=255) ctcGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGcc < 1:1239691/140‑1 (MQ=255) ctcGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGcc < 2:2144192/140‑1 (MQ=255) ctcGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGcc > 1:1840084/1‑140 (MQ=255) ctcGACAAGGATATTGAGGGTGAAAAAAAATGAAATGGAGGTAAGTTGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGcc < 1:108750/140‑1 (MQ=255) cGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCaa < 2:360205/140‑1 (MQ=255) cGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCaa < 2:339250/140‑1 (MQ=255) atTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATaca < 2:693771/140‑1 (MQ=255) atTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATaca < 1:1385560/140‑1 (MQ=255) atTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATaca < 1:1500652/140‑1 (MQ=255) gAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCg > 2:1733994/1‑140 (MQ=255) gAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCg > 2:687191/1‑140 (MQ=255) gAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCg > 2:1074630/1‑140 (MQ=255) ggTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCaaa > 1:487208/1‑99 (MQ=255) ggTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAAc > 1:1159842/1‑140 (MQ=255) ggTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAAc > 2:538448/1‑140 (MQ=255) ggTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAAc > 1:1409605/1‑140 (MQ=255) gTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATATATACACCGaaat > 2:1308499/1‑138 (MQ=255) gTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACt > 1:292960/1‑140 (MQ=255) gTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACt > 1:2072271/1‑140 (MQ=255) gTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATAAAAAATCTTGAAAATGCCTTGGGCATAGCGGATATTAACCAAAAAGTCATAAATAAAAATATCGCCAATATATATACACCGAACt > 2:1243922/1‑140 (MQ=255) tGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGc < 2:2124733/83‑1 (MQ=255) tGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGc > 1:2124733/1‑83 (MQ=255) tGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACta > 1:112899/1‑140 (MQ=255) tGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACta > 1:1652801/1‑140 (MQ=255) tGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACta > 1:1597126/1‑140 (MQ=255) tGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACta > 1:296485/1‑140 (MQ=255) tGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACta > 1:112507/1‑140 (MQ=255) aaaaaaaCTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGAGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACtata > 2:2285276/1‑140 (MQ=255) aaaaaaaCTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGAGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACtata > 2:165166/1‑140 (MQ=255) gAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATttat < 1:495987/140‑1 (MQ=255) gAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATttat < 1:1074630/140‑1 (MQ=255) gAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATttat < 1:1733994/140‑1 (MQ=255) gAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATttat < 1:687191/140‑1 (MQ=255) gAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGAGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCAAAAAAAGTCTCTTTCCAAAATttat < 1:161138/140‑1 (MQ=255) gAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGAGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCAAAAAAAGTCTCTTTCCAAAATttat < 1:165166/140‑1 (MQ=255) gAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGAGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCAAAAAAAGTCTCTTTCCAAAATttat < 1:2285276/140‑1 (MQ=255) aGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAtatttatt > 1:727133/1‑140 (MQ=255) cTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAg > 2:201010/1‑140 (MQ=255) aTTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATc > 1:10611/1‑140 (MQ=255) aTTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATc < 2:522542/140‑1 (MQ=255) aTTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATc > 1:384363/1‑140 (MQ=255) tttCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATCaa < 2:266144/140‑1 (MQ=255) tttCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATCaa < 2:1840084/140‑1 (MQ=255) aCGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATCAAGAATCctc < 2:2189277/140‑1 (MQ=255) aCGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATCAAGAATCctc < 2:2077901/140‑1 (MQ=255) aTCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATCAAGAATCCTCTCGTCTTGaa < 2:1989409/140‑1 (MQ=255) ttGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATCAAGAATCCTCTCGTCTTGAAGCGATAAAAACAGa < 1:1598763/140‑1 (MQ=255) gggCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATCAAGAATCCTCTCGTCTTGAAGCGATAAAAACAGACt > 2:297651/1‑140 (MQ=255) gggCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATCAAGAATCCTCTCGTCTTGAAGCGATAAAAACAGACt > 2:504518/1‑140 (MQ=255) gggCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATCAAGAATCCTCTCGTCTTGAAGCGATAAAAACAGACt > 2:1760288/1‑140 (MQ=255) gggCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATCAAGAATCCTCTCGTCTTGAAGCGATAAAAAAAGACt > 2:1201566/1‑140 (MQ=255) ggCAGAGCTGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATCAAGAATCCTCTCGTCTTGAAGCGATAAAAACAGACTa < 2:1625715/140‑1 (MQ=255) ggCAGAGCGTATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATCAAGAATCCTCTCGTCTTGAAGCGATAAAAACAGACTa < 2:1447640/140‑1 (MQ=255) ggCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATCAAGAATCCTCTCGTCTTGAAGCGATAAAAACAGACTa < 2:2010024/140‑1 (MQ=255) ggCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATCAAGAATCCTCTCGTCTTGAAGCGATAAAAACAGACTa < 2:1911100/140‑1 (MQ=255) | TTTATGCCTGTTATTTCTTACAATAAGCATATAGTTTTACAATTCTCGACAAGGATATTGAGGGTGAAAAAAACTGAAATGGAGGTAAGTGGATTTGAGCTTATTTTCTGGAACGATACAAAATCTTGAAAATGCCTTGGGCAGAGCGGATATTAAGCAAAAAGTCATAACTAATAATATCGCCAATATAGATACACCGAACTATAAGGCGAAAAAAGTCTCTTTCCAAAATTTATTAGATCAAGAATCCTCTCGTCTTGAAGCGATAAAAACAGACTA > NZ_CP034943/1658973‑1659251 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |