| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,754,575 | A→G | 5.7% | R254R (AGA→AGG) ‡ | EO946_RS09090 → | acyltransferase domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,754,575 | 0 | A | G | 5.7% | 396.6 / 8.7 | 123 | R254R (AGA→AGG) ‡ | EO946_RS09090 | acyltransferase domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base A (49/67); new base G (3/4); total (52/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 128 total aligned reads displayed.
AGTGCCTATGCAGAATTTTTAAAATCAATCTCTTTCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCGCTGCTGCTCGATTATGACAC > NZ_CP034943/1754441‑1754714 | aGTGCCTATGCAGAATTTTTAAGATCAAAATCTTTTCAAAAACCGTCAATACCGATTGTATCGAGCTTAACGGGAAGCTGCCTTCACGTAATGGACGAGAATTTCTTTTGGAATGCGGTCAGAAAGCCAATGATGTTTcg > 2:1242392/1‑140 (MQ=255)aGTGCCTATGCAGAATTTTTAAGATCAAAATCTTTTCAAAAACCGTCAATACCGATTGTATCGAGCTTAACGGGAAGCTGCCTTCACGTAATGGACGAGAATTTCTTTTGGAATGCGGTCAGAAAGCCAATGATGTTTcg > 2:321885/1‑140 (MQ=255) ccTATGGAGAATTTTTAAAATCAATCGCTGTCAAAAACCCATCAATACCGCTTGTATCGCGTGTAACGGGACGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGCACCAATGAGATTTcgcgca > 2:654815/1‑138 (MQ=255) ccTATGCAGAATTTTTAAAATCAATCTCTTTCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGaa > 2:1277186/1‑140 (MQ=255) ccTATGCAGAATTTTTAAAATCAATCTCTTTCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGaa > 2:451249/1‑140 (MQ=255) ccTATGCAGAATTTTTAAAATCAATCTCTTTCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGaa > 2:398663/1‑140 (MQ=255) ccTATGCAGAATTTTTAAAATCAATCTCTTTCAAAAACCCATCAATACCGATTGTATCGAGGTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGAGaa > 2:2101975/1‑140 (MQ=255) tGCAGAATTTTTAAAATCAATCTCTTTCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGa > 1:1299212/1‑140 (MQ=255) cAGAATTTTTAAAATCAATCTCTTTCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGAtt < 1:200934/140‑1 (MQ=255) cAGAATTTTTAAAATCAATCTCTTTCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGAtt < 1:1113479/140‑1 (MQ=255) cAGAATTTTTAAAATCAATCTCTTTCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGAtt < 2:944178/140‑1 (MQ=255) cAGAATTTTTAAAATCAATCTCTTTCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTGCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGAtt < 2:1828066/140‑1 (MQ=255) aactcaatcTCTTTCAAAAACCCATCAATACCGAGTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGa < 2:2072464/137‑1 (MQ=255) aatcactcTCGTGCACACACCCATCAATACCGATTGTAGCGAGTTTACCGGGAAGCTGCCCTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGaa < 1:1333090/140‑1 (MQ=255) aatcaatcTCTTTCAACAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGaa < 1:1072718/140‑1 (MQ=255) aatcaatcTCTTTCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGaa < 1:1290081/140‑1 (MQ=255) aatcaatcTCTTTCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGaa < 1:1436068/140‑1 (MQ=255) aatcaatcTCTTTCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGaa < 1:897800/140‑1 (MQ=255) aatcaatcTCTTTCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGaa < 1:897798/140‑1 (MQ=255) aatcaatcTCTTTCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGaa < 1:607703/140‑1 (MQ=255) aatcaatcTCTTTCAAAAACCCATCAATACCGATTGTATAGACTGTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGaa < 1:1941464/140‑1 (MQ=255) ctctTTCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGc > 2:765089/1‑140 (MQ=255) ctctTTCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGc > 2:1735336/1‑140 (MQ=255) tttCAAAAACCCATCTATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATa < 2:2066769/140‑1 (MQ=255) tCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACg < 1:934444/140‑1 (MQ=255) tCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGAATACg < 1:2414882/140‑1 (MQ=255) aaaaCCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGc < 2:1494334/140‑1 (MQ=255) aaaCCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGcc < 1:715082/140‑1 (MQ=255) aaaCCAATCAAGACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGAAAAGAATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGcc < 1:2393983/140‑1 (MQ=255) cATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGtat < 2:218687/140‑1 (MQ=255) cATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGtat < 2:219275/140‑1 (MQ=255) tCAATACCGATTGTATCGAGTTTACCGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTatat < 2:1784010/140‑1 (MQ=255) tCAATACCGATTGTATCGAGTTTACCGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTatat < 2:1222505/140‑1 (MQ=255) tCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTatat < 1:1532814/140‑1 (MQ=255) tCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTatat < 1:2265058/140‑1 (MQ=255) tCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTatat < 1:877138/140‑1 (MQ=255) tCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTatat < 1:39171/140‑1 (MQ=255) tCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGAATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTatat < 1:2183574/140‑1 (MQ=255) aCCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGTATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATAGGTGCCGGTATATCGAtt < 1:56781/140‑1 (MQ=255) aTTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAgg > 1:1101358/1‑140 (MQ=255) aTTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAgg > 1:1294704/1‑140 (MQ=255) aTTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAgg > 2:745949/1‑140 (MQ=255) ttGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGgt < 1:1710657/140‑1 (MQ=255) aTCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGgtccgt > 1:1161335/1‑140 (MQ=255) aTCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGgtccgt > 1:1788321/1‑140 (MQ=255) tCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGAGATTCGATATTTGGAAAGCCAGCATACGCGCCGGTATATCGATTTAGgtccttc > 2:2117419/1‑140 (MQ=255) aGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCgg < 1:1575635/140‑1 (MQ=255) aGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCgg < 1:1517100/140‑1 (MQ=255) aGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCgg < 1:1773165/140‑1 (MQ=255) aGTTTAACGCGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGACCCCATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCACCATACGTGCCGGTATATCGATTTAGCTCCGTCCgg < 1:1519956/140‑1 (MQ=255) tttAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCa > 2:315544/1‑140 (MQ=255) tAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCCATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCAcc < 1:792426/140‑1 (MQ=255) tAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCAcc < 1:959330/140‑1 (MQ=255) tAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCAcc < 1:780873/140‑1 (MQ=255) tAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCAcc < 1:1337244/140‑1 (MQ=255) gaaCGGGCAGCCGCCTTCACGAAAAGGAGAAGCAATTCTTTTGGAATGCTGTCAGAGACCCAATGAGATTTCGCGACGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCAcc < 1:951468/139‑1 (MQ=255) aaCGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCt > 1:291417/1‑140 (MQ=255) aCGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGaaa < 1:2115260/140‑1 (MQ=255) aTGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCt > 2:2053186/1‑140 (MQ=255) aTGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCt > 2:1510367/1‑140 (MQ=255) aTGGACAAACATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCt > 2:843221/1‑140 (MQ=255) aCAAGCATTTCTTGTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTTGGTCCGTCCGGCAGCTTAGCTGCTTTTGTGAAAGAGCTGATc < 2:356912/140‑1 (MQ=255) aGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCg > 1:1940028/1‑140 (MQ=255) aGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCg > 1:268684/1‑140 (MQ=255) gCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCgg < 2:1444863/140‑1 (MQ=255) gCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCgg < 2:683194/140‑1 (MQ=255) gCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCgg < 2:2147106/140‑1 (MQ=255) gCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCgg < 2:232867/140‑1 (MQ=255) cATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCTGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCggg < 2:1469694/140‑1 (MQ=255) cATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTatat > 2:1195336/1‑86 (MQ=255) cATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTatat < 1:1195336/86‑1 (MQ=255) ttCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGgaga < 1:1687893/140‑1 (MQ=255) ttCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGgaga < 1:36534/140‑1 (MQ=255) tCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGAt > 1:1750857/1‑140 (MQ=255) tCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGAt > 1:1765028/1‑140 (MQ=255) cTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCgc > 2:534042/1‑140 (MQ=255) cTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCgc > 2:221937/1‑140 (MQ=255) gagaACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTTAAACAGCTGATCCCGGGAGAATCAGCGAACAgctgctgc > 2:2309446/1‑140 (MQ=255) gagaACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCgctgctgc > 2:120511/1‑140 (MQ=255) gagaACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCgctgctgc > 2:575505/1‑140 (MQ=255) gaACCACTGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCGCTGCTGCTc < 1:2402073/140‑1 (MQ=255) gaACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTGCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCGCTGCTGCTc < 2:1113137/140‑1 (MQ=255) gaACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCGCTGCTGCTc < 1:2402047/140‑1 (MQ=255) agccAATGATGTTTCGTGAAGCGATTCGATATTTGGAAAGCCAGCATACATGCAAGTTTATCGATTTAGGGCCATCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATTCCGGGTGATTCAGCTGACCGTTGCTGCTca < 1:1242392/138‑2 (MQ=255) agccAATGATGTTTCGTGAAGCGATTCGATATTTGGAAAGCCAGCATACATGCAAGTTTATCGATTTAGGGCCATCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATTCCGGGTGATTCAGCTGACCGTTGCTGCTca < 1:321885/138‑2 (MQ=255) agccAATGATGTTTCGTGAAGCGATTCGATATTTGGAAAGCCAGCATACATGCAAGTTTATCGATTTAGGGCCATCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATTCCGGGTGATTCAGCTGACCGTTGCTGCTca < 1:2083642/138‑2 (MQ=255) aCCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCGCTGCTGCTCGa > 2:1611380/1‑140 (MQ=255) aCCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCGCTGCTGCTCGa > 2:245647/1‑140 (MQ=255) aCCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCGCTGCTGCTCGa > 2:2246228/1‑140 (MQ=255) ccAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCGCTGCTGCTCGAt > 2:1358541/1‑140 (MQ=255) ccAATGAGATTTCGCGAAGCGATTCGATATGTGGAAAGCCAGCATACGTGCCGGTATATCGATATAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCGCGGGAGATTCAGCGTACCGCTGCTGCTCGAt > 2:514676/1‑140 (MQ=255) ccAATGAGATGTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCTATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGGTCCCGGGAGATTCAGCGAACCGCTGCTGCTCGAt > 2:57532/1‑140 (MQ=255) aaTGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGc > 2:870210/1‑49 (MQ=255) aaTGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCGCTGCTGCTCGATTa > 2:2222407/1‑140 (MQ=255) aaTGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCGCTGCTGCTCGATTa > 2:766610/1‑140 (MQ=255) aTGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCGCTGCTGCTCGATTAt < 1:2080208/140‑1 (MQ=255) tGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCgctg < 1:56925/127‑1 (MQ=255) agaTTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGCCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCGCTGCTGCTCGATTATGac < 2:1168575/140‑1 (MQ=255) aTTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCGCTGCTGCTCGATTATGacac > 1:37499/1‑140 (MQ=255) aTTTCGCGAAGCGATTCGAGATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCGCTGCTGCTCGATTATGacac > 1:407820/1‑140 (MQ=255) | AGTGCCTATGCAGAATTTTTAAAATCAATCTCTTTCAAAAACCCATCAATACCGATTGTATCGAGTTTAACGGGAAGCTGCCTTCACGAAATGGACAAGCATTTCTTTTGGAATGCTGTCAGAGAACCAATGAGATTTCGCGAAGCGATTCGATATTTGGAAAGCCAGCATACGTGCCGGTATATCGATTTAGGTCCGTCCGGCACCTTAGCTGCTTTTGTGAAACAGCTGATCCCGGGAGATTCAGCGAACCGCTGCTGCTCGATTATGACAC > NZ_CP034943/1754441‑1754714 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |