| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,759,155 | G→A | 5.1% | L176L (TTG→TTA) | pksG → | polyketide biosynthesis 3‑hydroxy‑3‑methylglutaryl‑ACP synthase PksG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,759,155 | 0 | G | A | 5.1% | 588.7 / 12.8 | 178 | L176L (TTG→TTA) | pksG | polyketide biosynthesis 3‑hydroxy‑3‑methylglutaryl‑ACP synthase PksG |
| Reads supporting (aligned to +/- strand): ref base G (91/77); new base A (2/7); total (93/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.72e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.17e-01 | |||||||||||
Only 100 of 178 total aligned reads displayed.
TCTCCGGGTGCCAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCATATCTGGA > NZ_CP034943/1759024‑1759292 | tctcCGGGTGCCAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGa < 1:950275/140‑1 (MQ=255)tctcCGGGTGCCAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGa < 2:1231583/140‑1 (MQ=255) ctcCGGGTGCCAAAGCACTGGTTATCGCCCGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGaa > 1:534104/1‑140 (MQ=255) ctcCGGGTGCCAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTa < 2:1452127/134‑1 (MQ=255) ctcCGGGTGCCAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTa < 2:1613262/134‑1 (MQ=255) ctcCGGGTGCCAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTa > 1:1613262/1‑134 (MQ=255) ctcCGGGTGCCAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGaa > 1:837872/1‑140 (MQ=255) ctcCGGGTGCCAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGaa > 2:1152611/1‑140 (MQ=255) ctcCGGGTGCCAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGaa > 1:1867559/1‑140 (MQ=255) ccAAAGCACGGGGTCTCGCCAGTGATATTTCGCGTTTTTTAAGCGCGGACGGCGGAGACGCTTTAAGTGAAGACGGGTCTTCTGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAg < 2:1945407/140‑1 (MQ=255) tGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCaa > 2:2338773/1‑140 (MQ=255) tGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCaa > 2:1904959/1‑140 (MQ=255) ggTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCaaa > 2:1166244/1‑140 (MQ=255) gTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAAt > 1:1730847/1‑140 (MQ=255) gTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATACCGAGGTGTTTCAAAt < 1:1152611/140‑1 (MQ=255) cGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATc > 2:43231/1‑140 (MQ=255) cGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATc > 2:779044/1‑140 (MQ=255) ccAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTATTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCa < 2:2368494/140‑1 (MQ=255) gTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGa > 1:2327373/1‑140 (MQ=255) gTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCCGTTTTAGTTGGCGAAAATCCCGAGGTGTTTCAAATAGATCCCGGa > 2:2020499/1‑140 (MQ=255) gTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCCGTTTTAGTTGGCGAAAATCCCGAGGTGTTTCAAATAGATCCCGGa > 2:1177921/1‑140 (MQ=255) tatTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCaa < 2:534104/140‑1 (MQ=255) tatTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCaa < 1:212130/140‑1 (MQ=255) cgTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGACTACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGTGGTGTTTCATATAGATCCAGGAGCACATGGCTa > 2:1081207/1‑140 (MQ=255) cgTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTa > 2:498489/1‑140 (MQ=255) cgTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTa > 1:1280985/1‑140 (MQ=255) cgTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTa > 2:741942/1‑140 (MQ=255) gTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTAt < 2:961369/140‑1 (MQ=255) tttttAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTa < 1:968418/140‑1 (MQ=255) tttttAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTa < 2:2305072/140‑1 (MQ=255) aaTCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCt < 1:689323/140‑1 (MQ=255) cTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCGGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTGTCAAATAGATCCAGGAGCAAAGGGCTATTACGGCTATGaa > 2:1702990/1‑140 (MQ=255) cTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGaa > 2:859219/1‑140 (MQ=255) cTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGaa > 2:669224/1‑140 (MQ=255) cTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAAGGGCTATTACGGCTATGaa > 2:858733/1‑140 (MQ=255) gCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTg < 1:1904959/140‑1 (MQ=255) gCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTg < 2:2244693/140‑1 (MQ=255) gCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTg < 1:2338773/140‑1 (MQ=255) cTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGc > 1:407935/1‑140 (MQ=255) cTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGc > 1:1421203/1‑140 (MQ=255) aaGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTc < 1:782524/140‑1 (MQ=255) aaGCGAAGATTGGTCTTATGCGGAACCGAGCGCCGGAGCGGGAGCGGTGGCCGTTTTAGTTGGCGAAAATCCCGAGGTGTTTCAAATAGATCCCGGAGCAACTGGTTATTACGGCTATGACGTGATGGACACGTGCCgcc < 1:2188875/140‑3 (MQ=255) aaGCGAAGATTGGTCTTATGCGGAACCGAGCGCCGGAGCGGGAGCGGTGGCCGTTTTAGTTGGCGAAAATCCCGAGGTGTTTCAAATAGATCCCGGAGCAAATGGTTATTACGGCTATGAAGTGATGGACACGTGCCgcc < 1:718760/140‑3 (MQ=255) aaGCGAAGATTGGTCTTATGCGGAACCGAGCGCCGGAGCGGGAGCGGTGGCCGTTTTAGTTGGCGAAAATCCCGAGGTGTTTCAAATAGATCCCGGAGCAAATGGTTATTACGGCTATGAAGTGATGGACACGTGCCgcc < 1:894228/140‑3 (MQ=255) aaGCGAAGATTGGTCTTATGCGGAACCGAGCGCCGGAGCGGGAGCGGTGGCCGTTTTAGTTGGCGAAAATCCCGAGGTGTTTCAAATAGATCCCGGAGCAAATGGTTATTACGGCTATGAAGTGATGGACACGTGCCgcc < 1:904877/140‑3 (MQ=255) aaGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCAtt > 2:1785391/1‑140 (MQ=255) aaGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCAtt > 2:1425047/1‑140 (MQ=255) aCTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTccc < 1:631507/140‑1 (MQ=255) ggTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGAc > 1:277028/1‑140 (MQ=255) gTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCa > 1:2403747/1‑88 (MQ=255) gTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCa < 2:2403747/88‑1 (MQ=255) gTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACgg > 2:2029848/1‑102 (MQ=255) gTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACa > 1:315041/1‑140 (MQ=255) aTGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAg < 1:1223475/59‑1 (MQ=255) aTGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAg > 2:1223475/1‑59 (MQ=255) aTGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGTATACCTGCCGTCCCATTCCCGACAGTGaa > 1:1363237/1‑140 (MQ=255) aTGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGaa > 1:1802270/1‑140 (MQ=255) aTGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGaa > 2:1335020/1‑140 (MQ=255) tGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAg > 1:2229855/1‑140 (MQ=255) gAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCggg < 2:1318473/140‑1 (MQ=255) aaCCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCACATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGga > 1:553788/1‑140 (MQ=255) aaCCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCggg < 2:1915302/139‑1 (MQ=255) aaCCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGga > 2:814424/1‑140 (MQ=255) aaCCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGga > 2:248802/1‑140 (MQ=255) aGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTc > 1:2105540/1‑140 (MQ=255) aGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTc > 1:2031158/1‑140 (MQ=255) aGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTc > 1:1217698/1‑140 (MQ=255) aGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTc > 1:1400725/1‑140 (MQ=255) aGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGCGAACATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGGTATGAAGTGATGGGTACCTGCCGGACCATTCCCGACCGTGAAGCTGGAGAtcg > 1:1358863/1‑138 (MQ=255) cgcCGGAGCGGGAGCGTTGGGTGTTGTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGTCTATGAAGTGATGGATACCTGCCGTCCCATTCCTGACAGTGAAGCGGGATATTCTg > 1:1585762/1‑140 (MQ=255) cgcCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATg > 1:45635/1‑74 (MQ=255) cgcCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATg > 1:45648/1‑74 (MQ=255) cgcCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATg > 1:1369979/1‑74 (MQ=255) cgcCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATg > 1:1886432/1‑74 (MQ=255) cgcCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATg < 2:45648/74‑1 (MQ=255) ccGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAc < 2:879119/140‑1 (MQ=255) ccGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAc < 2:2088608/140‑1 (MQ=255) ccGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAc < 2:1048916/140‑1 (MQ=255) ccGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAc < 1:1957698/140‑1 (MQ=255) cGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAcc < 2:931891/140‑1 (MQ=255) cGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAcc < 2:2327373/140‑1 (MQ=255) cGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAcc < 1:200790/140‑1 (MQ=255) cGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAcc < 2:508076/140‑1 (MQ=255) ggagcgggagcgGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCt < 1:1785391/140‑1 (MQ=255) ggagcggTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCttt < 2:1867559/140‑1 (MQ=255) gagcggTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTa < 1:1166244/140‑1 (MQ=255) gagcggTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTa < 2:1681527/140‑1 (MQ=255) gagcggTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTa < 2:1462905/140‑1 (MQ=255) ggTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGt < 1:1328801/140‑1 (MQ=255) gttgatGTTTTGGTAGGCGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTc < 2:1529480/135‑1 (MQ=255) gTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAcc < 2:2161239/127‑1 (MQ=255) gTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAcc > 1:2161239/1‑127 (MQ=255) gTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTc > 2:611080/1‑140 (MQ=255) gTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTc < 2:841709/140‑1 (MQ=255) tGGCTGTTTTTGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCa < 2:375679/140‑1 (MQ=255) ggCCGTTTTAGTTGGCGAAAATCCCGAGGTGTTTCAAATAGATCCCGGAGCAAATGGTTATTACGGCTATGAAGTGATGGACACGTGCCGCCCCATTCCCGACAGTGAAGCGGGAGATTCTGATCTGTCTTTAATGTCat < 1:2020499/140‑1 (MQ=255) tGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCATATc > 1:1255080/1‑140 (MQ=255) tGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCATATc > 1:1499289/1‑140 (MQ=255) ttGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCATATCTGGa > 2:2068808/1‑140 (MQ=255) ttGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCATATCTGGa > 2:1651519/1‑140 (MQ=255) | TCTCCGGGTGCCAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCATATCTGGA > NZ_CP034943/1759024‑1759292 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |