| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,759,161 | G→C | 5.7% | G178G (GGG→GGC) | pksG → | polyketide biosynthesis 3‑hydroxy‑3‑methylglutaryl‑ACP synthase PksG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,759,161 | 0 | G | C | 5.7% | 603.0 / 18.0 | 182 | G178G (GGG→GGC) | pksG | polyketide biosynthesis 3‑hydroxy‑3‑methylglutaryl‑ACP synthase PksG |
| Reads supporting (aligned to +/- strand): ref base G (90/81); new base C (3/8); total (93/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 183 total aligned reads displayed.
TCTCCGGGTGCCAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCATATCTGGATTGCTGCG > NZ_CP034943/1759024‑1759300 | ctcCGGGTGCCAAAGCACTGGTTATCGCCCGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGaa > 1:534104/1‑140 (MQ=255) ctcCGGGTGCCAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGaa > 1:446478/1‑140 (MQ=255) ctcCGGGTGCCAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGaa > 1:1771155/1‑140 (MQ=255) ctcCGGGTGCCAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGaa > 1:1297697/1‑140 (MQ=255) ctcCGGGTGCCAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTGTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGGTGTGTTGGTAGGGGaa > 2:2029773/1‑140 (MQ=255) ccAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAg < 1:476920/140‑1 (MQ=255) ccAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAg < 1:1412687/140‑1 (MQ=255) ccAAAGCACTGGTTATCGCCAGTGATAGTTGGCGTTTGTTAATCGCGGAGGGCGGAGCCGCTTTAAGCGACGACTGGTATTATGCCGAACCGCGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAg < 2:1808398/140‑1 (MQ=255) ccAAAGCACGGGGTCTCGCCAGTGATATTTCGCGTTTTTTAAGCGCGGACGGCGGAGACGCTTTAAGTGAAGACGGGTCTTCTGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAg < 2:1945407/140‑1 (MQ=255) tGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCaa > 2:2338773/1‑140 (MQ=255) gTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATACCGAGGTGTTTCAAAt < 1:1152611/140‑1 (MQ=255) cGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATc > 2:43231/1‑140 (MQ=255) cGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATc > 2:779044/1‑140 (MQ=255) ccAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGGTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCa > 2:16881/1‑140 (MQ=255) ccAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTATTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCa < 2:2368494/140‑1 (MQ=255) gTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGa > 1:2327373/1‑140 (MQ=255) gTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCCGTTTTAGTTGGCGAAAATCCCGAGGTGTTTCAAATAGATCCCGGa > 2:1177921/1‑140 (MQ=255) tatTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCaa < 2:534104/140‑1 (MQ=255) cgTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGACTACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGTGGTGTTTCATATAGATCCAGGAGCACATGGCTa > 2:1081207/1‑140 (MQ=255) cgTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTa > 1:835048/1‑140 (MQ=255) cgTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTa > 2:741942/1‑140 (MQ=255) cgTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTa > 1:318556/1‑140 (MQ=255) gTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTAt < 2:1170139/140‑1 (MQ=255) gTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTAt < 2:961369/140‑1 (MQ=255) tttttAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTa < 1:968418/140‑1 (MQ=255) tttttAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCAGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTa < 1:739638/140‑1 (MQ=255) cGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATg < 1:2331838/140‑1 (MQ=255) cTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGaa > 2:859219/1‑140 (MQ=255) tGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAg < 2:1730847/140‑1 (MQ=255) gggCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGa < 2:458541/140‑1 (MQ=255) gCTTTAAGTGAAGACTGGTGTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTg < 2:2245168/140‑1 (MQ=255) gCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTg < 1:2338773/140‑1 (MQ=255) gCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTg < 1:2154439/140‑1 (MQ=255) gCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTg < 2:2244693/140‑1 (MQ=255) cTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGc > 1:1616826/1‑140 (MQ=255) cTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGc > 1:702079/1‑140 (MQ=255) aaccgAAGATTGGTCTCATGCGGACCCGAGCGCCGGAGCGCGAGCGGTGGCCGATGTAGTTGGCGAAAATCCCGAGGTGTTTCAAATAGATCCCGGAGCAAATGGTTATTACGGCTATGAAGTGATGGACACGTGCCgcc < 1:1902706/136‑3 (MQ=255) aaGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTTTTACGGCTATGAAGTGATGGATACCTGCCGTc < 1:1834905/140‑1 (MQ=255) aaGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTc < 1:294482/140‑1 (MQ=255) aaGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTc < 1:271509/140‑1 (MQ=255) aaGCGAAGATTGGTCTTATGCGGAACCGAGCGCCGGAGCGGGAGCGGTGGCCGTTTTAGTTGGCGAAAATCCCGAGGTGTTTCAAATAGATCCCGGAGCAACTGGTTATTACGGCTATGACGTGATGGACACGTGCCgcc < 1:2188875/140‑3 (MQ=255) aaGCGAAGATTGGTCTTATGCGGAACCGAGCGCCGGAGCGGGAGCGGTGGCCGTTTTAGTTGGCGAAAATCCCGAGGTGTTTCAAATAGATCCCGGAGCAAATGGTTATTACGGCTATGAAGTGATGGACACGTGCCgcc < 1:904877/140‑3 (MQ=255) aaGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCAtt > 2:200790/1‑140 (MQ=255) aaGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCAtt > 2:1425047/1‑140 (MQ=255) aCTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTccc < 1:631507/140‑1 (MQ=255) aCTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTccc < 1:951481/140‑1 (MQ=255) gTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCa < 2:2403747/88‑1 (MQ=255) gTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCACATGGCTATTACGGCTCTGAAGTGATGGATCCCTGCCGTCCCATTCCCGaga > 2:1435082/1‑138 (MQ=255) gTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACa > 2:27566/1‑140 (MQ=255) aTGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAg > 2:1223475/1‑59 (MQ=255) aTGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAg < 1:1223475/59‑1 (MQ=255) aTGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGTATACCTGCCGTCCCATTCCCGACAGTGaa > 1:1363237/1‑140 (MQ=255) aTGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGaa > 2:1335020/1‑140 (MQ=255) tGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAg > 1:2229855/1‑140 (MQ=255) gAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCggg < 2:1318473/140‑1 (MQ=255) aaCCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGACAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGga > 1:1574780/1‑140 (MQ=255) aaCCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCACATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGga > 1:553788/1‑140 (MQ=255) aaCCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCggg < 2:1915302/139‑1 (MQ=255) aaCCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCggg > 1:1915302/1‑139 (MQ=255) aaCCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGga > 2:814424/1‑140 (MQ=255) aaCCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGga > 2:666458/1‑140 (MQ=255) aGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAg > 1:85538/1‑48 (MQ=255) aGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAg < 2:85538/48‑1 (MQ=255) aGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTc > 1:2031158/1‑140 (MQ=255) aGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTc > 1:2105540/1‑140 (MQ=255) aGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTc > 1:1217698/1‑140 (MQ=255) aGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTc > 1:1788335/1‑140 (MQ=255) aGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTc > 1:2111258/1‑140 (MQ=255) aGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGCGAACATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGGTATGAAGTGATGGGTACCTGCCGGACCATTCCCGACCGTGAAGCTGGAGAtcg > 1:1358863/1‑138 (MQ=255) cgcCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATg > 1:1369979/1‑74 (MQ=255) cgcCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATg < 2:45635/74‑1 (MQ=255) cgcCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATg > 1:45648/1‑74 (MQ=255) cgcCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATg < 2:1886432/74‑1 (MQ=255) cgcCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATg > 1:1886432/1‑74 (MQ=255) ccGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAc < 1:1982164/140‑1 (MQ=255) ccGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAc < 2:2088608/140‑1 (MQ=255) ccGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAc < 2:1048916/140‑1 (MQ=255) ccGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAc < 2:879119/140‑1 (MQ=255) ccGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAc < 2:1156630/140‑1 (MQ=255) cGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAcc < 2:508076/140‑1 (MQ=255) cGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAcc < 2:2327373/140‑1 (MQ=255) cGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAcc < 2:931891/140‑1 (MQ=255) gagcggTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTa < 1:1166244/140‑1 (MQ=255) gagcggTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTa < 2:1681527/140‑1 (MQ=255) ggTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGt < 1:1328801/140‑1 (MQ=255) ggTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGt < 2:540969/140‑1 (MQ=255) gttgatGTTTTGGTAGGCGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTc < 2:1529480/135‑1 (MQ=255) gTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGAcc < 2:2161239/127‑1 (MQ=255) gTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTc > 2:161634/1‑140 (MQ=255) gTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTc < 2:841709/140‑1 (MQ=255) tGGCTGTTTTTGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCa < 2:375679/140‑1 (MQ=255) ggCCGTTTTAGTTGGCGAAAATCCCGAGGTGTTTCAAATAGATCCCGGAGCAAATGGTTATTACGGCTATGAAGTGATGGACACGTGCCGCCCCATTCCCGACAGTGAAGCGGGAGATTCTGATCTGTCTTTAATGTCat < 1:2020499/140‑1 (MQ=255) tGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCATATc > 1:1255080/1‑140 (MQ=255) tGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCATATc > 1:1499289/1‑140 (MQ=255) ttGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCATATCTGGa > 2:2068808/1‑140 (MQ=255) tAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCATATCTGGATtgc > 2:1482007/1‑140 (MQ=255) aGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCATATCTGGATtgct < 2:1499289/140‑1 (MQ=255) aGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCATATCTGGATtgct < 2:1255080/140‑1 (MQ=255) aGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCATATCTGGATtgct < 1:945503/140‑1 (MQ=255) aGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCATATCTGGATtgct < 1:779044/140‑1 (MQ=255) | TCTCCGGGTGCCAAAGCACTGGTTATCGCCAGTGATATTTCGCGTTTTTTAATCGCTGAGGGCGGAGACGCTTTAAGTGAAGACTGGTCTTATGCCGAACCGAGCGCCGGAGCGGGAGCGGTGGCTGTTTTGGTAGGGGAAAATCCCGAGGTGTTTCAAATAGATCCAGGAGCAAATGGCTATTACGGCTATGAAGTGATGGATACCTGCCGTCCCATTCCCGACAGTGAAGCGGGAGATTCTGACCTGTCTTTAATGTCATATCTGGATTGCTGCG > NZ_CP034943/1759024‑1759300 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |