New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 607149	482 (1.740)	7 (0.030) +TGCCGGGAGTCATG	4/240	10.3	1.7%	intergenic (+515/‑9)	EO946_RS03180/EO946_RS03185	glycosyltransferase/collagen‑like protein
	?	NZ_CP034943	607794 =	420 (1.520)					coding (637/1125 nt)	EO946_RS03185	collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP034943/607103‑607149 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGT  >  NZ_CP034943/607794‑607890                                                ||||||||||||||                                                                                                  ACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAACCGGCGCGACAGGAGCCACGGGAGCAACAGGCCCAGGAGCAGCTG                    >  2:3657821/1‑140            CACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAA         <  1:1688386/140‑1              cccGGACCACAAGGAGCACCCGGACCACCCGGACAGCCGGGAGACAGGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAACCGGCGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATA       <  2:2363926/137‑1                   ACCCCACGGAGCACAATGACCTCAAGGACTGCCCGGAGCCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGT  <  2:3423572/140‑1                   ACCAAAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCAGGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGT  <  1:3449672/140‑1                             CCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAG                                                                                               >  1:3394794/1‑37                             CCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAG                                                                                               <  2:3394794/37‑1                                                ||||||||||||||                                                                                                  ACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP034943/607103‑607149 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGT  >  NZ_CP034943/607794‑607890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.